Ggra5784.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5784.t1
Unique NameGgra5784.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length742
Homology
BLAST of Ggra5784.t1 vs. uniprot
Match: A0A2V3IUZ4 (Serine protease 28 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ4_9FLOR)

HSP 1 Score: 671 bits (1732), Expect = 5.240e-226
Identity = 383/582 (65.81%), Postives = 457/582 (78.52%), Query Frame = 0
Query:   19 FGDTGSPLYDVDKSGTVAVLVAVATLGRHDSYEVQRPFCTNGRTPIIYTTVAPYVSWIRRTMGNATLSEFFIPPTGINNVVLATPKSSLPVAARASIIAVCTLVLAGLLGTLTFLCIVRRMRARRRRWRTGLQAEDSFINSRAPDLIMADPFEG--IQRERQSTMSLSQLSSNAIARLKRAKEYSTRSLAAIRARIIKEEEPLELP-REAIPDAPEWVSSAWDKLFQPPSKSDLSSIHKIPTQRVVDDVLSGADKSVEPSLQEVAFQAAREEANLEAAWHRLEMQTSLRSMSEAASANLSPPLSPLPQSPQSGSRGMFASLSRSGSKRGSASSSPLRRALS-SSRPPPGELAKADTLLAAFAPIDNESEHVEETVVDSAALRALATAKRPNVVNALRRMFSGPGMREPTSYSDGQSSGPSSSSRQGISSRQAGSSSGEMLESSFTLSSKHSLARMDYFSENYSVSDSGSEGDGKELFERAFMAGNRRYTDDRRSEFEETWSIPALRGYRKGPSLSLDELERRRSSHINEAGAVDAPGKNKSLAIERRLMEVLNYESSSQV-QDLWPGYRNDVSGMSDIAVQD 595
            FGDTGSPLYD+D+SGTVAVLVAVATLGR D++ ++ PFCTNGR PIIYTTVAP++SWIRRT+GNA+LSEF+IP TGINN+VLA+ K SL V AR SII V TLVLAG+L  L   C +R +R+RRRRW++GL AE SFINSR+PD+   DPFEG  +Q  R+ST+SLSQLSSNAI RLKR KE+STRSLA IRAR +KEE+    P RE +PDAPEWVSSAW++LF+ PSK DLS+IHK+PTQRVVDDVLSG DKSVEPSLQ+VAF +AREEANLEAAW RLE+QTSLR+MSEA+SAN++PPLSPLPQSP+SGSRG  ++LSRSGSKRGS  SSPLRRALS +SR  PGEL KADTLLAAFA ID ESEHVEETVVDS+ALRALA+AKRPN++NALRR+FS PG +   S S     G SS+ R  +S R+ GS S  + + SF LSSK     +DYFSENYS+SDSGSE   K LFE+AF+AG+RRYT+DRR    E   +P LRGYRKGPS SL EL+ RRSS   E   V++P  NK++ + + L ++  + S+ QV QD     R DV   S  AV +
Sbjct:  238 FGDTGSPLYDIDQSGTVAVLVAVATLGRTDTFAIRDPFCTNGRIPIIYTTVAPHLSWIRRTIGNASLSEFYIPSTGINNIVLASEKPSLGVVARTSIIVVSTLVLAGILIALIVCCSLRHLRSRRRRWQSGLAAEHSFINSRSPDVFSPDPFEGMHLQNRRRSTISLSQLSSNAIERLKRTKEFSTRSLAVIRARRMKEEKLSANPSREPVPDAPEWVSSAWERLFKSPSKGDLSAIHKVPTQRVVDDVLSGTDKSVEPSLQDVAFHSAREEANLEAAWQRLELQTSLRNMSEASSANITPPLSPLPQSPRSGSRGKLSALSRSGSKRGSGLSSPLRRALSPTSRASPGELTKADTLLAAFASIDAESEHVEETVVDSSALRALASAKRPNMLNALRRIFSSPGAQGSPSSSSLAPDGSSSTDRLRVS-RRNGSRSTSVQQDSFALSSKQGSMHLDYFSENYSLSDSGSEDGEKVLFEQAFVAGSRRYTEDRRPGEREGSYVPTLRGYRKGPSHSLQELQSRRSSGSMEEDEVESPELNKNVMVNKDL-DIQTFASARQVRQDQRQASRWDVDDESSGAVHE 817          
BLAST of Ggra5784.t1 vs. uniprot
Match: R7QJG7 (Peptidase S1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJG7_CHOCR)

HSP 1 Score: 316 bits (810), Expect = 1.060e-92
Identity = 233/573 (40.66%), Postives = 309/573 (53.93%), Query Frame = 0
Query:   19 FGDTGSPLYDVDKSGTVAVLVAVATLGRHDSYEVQ-RPFCTNGRTPIIYTTVAPYVSWIRRTMGNATLSEFFIPPTGINNVVLATPKSSLPVAARASIIAVCTLVLAGLLGTLTFLCIVRRMRARRRRWRTGLQAEDSFINSRAPDLIMADPFEGIQRERQST-MSLSQLSSNAIARLKRAKEYSTRSLAAIRARI--IKEEEPLELPREAIPDAPEWVSSAWDKLFQPPSKSDLSSIHKIPTQRVVDDVLSGADKSVEPSLQEVAFQAAREEANLEAAWHRLEMQTSLRSMSEAASANLSPPLSP--LPQSPQSGSRGMFASLSRSGSKRGSASSSPLRRALSSSRPPPGELA--KADTLLAAFAPIDNESEHV-EETVVDSAALRALATAKRPNVVNALRRMFSGPGMREPTSYSDGQSSGPSS----SSRQGISSRQAGSSSGE----------------MLESSFTLSSK-------------------------HSLARMDYFSENYSVSDSGSEGD-GKELFERAFMAGNRRYTDDRRSEFEETWSIPALRGYRKGPSLSLDELERR 536
            FGDTG+PLYDVDKSG V+VLV + T G     + +    CT+G    IYT VAPY+ WIR T+    L+EFFIP  GI N  L   K  L VAAR SII V +L L G +  L   C +RR+R RR+RW  GL AE+SF+        +ADPFEGI  + ++  +S++ LS  A+   K A E+S RS+  IRA +  ++EEE    PRE + DAP+W+  AW+KLF+ PSK DL  IHK+ TQRVVDDVL G DKSVEPSL  VAF+ AR+EANLEAAW +LE+QTSLR++SEA+ +      +P  +P +  + SR                                      K DTLLAAFA ID ESE V EET++D  AL+ALAT+KRP V+  LRR FSG  +    S  + +S   S     +SR+ I++  +G   G+                 + +    SSK                         H    +DYFSE+YS S S  E   G+ +F     + +RR+T+DR    +   S  +LR +RK    S ++LE R
Sbjct:   78 FGDTGAPLYDVDKSGKVSVLVGIVTFGLQGLADGEAESICTSGARATIYTAVAPYIGWIRETVDE-DLTEFFIPKEGITNTNLDPGKPGLSVAARTSIIVVASLALIGFIAFLLVTCTLRRLRNRRKRWVEGLHAEESFVKGDEKHAGIADPFEGIVDDHKTPRLSVNSLSRAAV---KSATEFSARSIGTIRALLMHVEEEEMAMEPREPMDDAPQWLPDAWEKLFKAPSKKDLEHIHKVKTQRVVDDVLEGGDKSVEPSLDHVAFKNARDEANLEAAWRKLEIQTSLRNLSEASGSKDGQESAPGTVPSTRNNSSRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDGKPDTLLAAFASIDAESEQVAEETMIDQLALQALATSKRPKVLETLRRKFSGSALLSALSNKNTESEATSPRVKLTSRKAITAGPSGQGGGQHGSVGRASSGRTGTAQTISALANRSSKPVGGGTPXXXXXXXXXXXLSGDMDRHGSMHIDYFSEDYSFSSSSDEEQPGQPVFN--LESASRRFTEDRP---DGIGSQQSLRSFRKSKPQSFEKLESR 641          
The following BLAST results are available for this feature:
BLAST of Ggra5784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUZ45.240e-22665.81Serine protease 28 n=1 Tax=Gracilariopsis chorda T... [more]
R7QJG71.060e-9240.66Peptidase S1 domain-containing protein n=1 Tax=Cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 13..83
e-value: 2.4E-5
score: 26.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 636..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 696..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..455
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..741
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 19..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:237925..240208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5784.t1Ggra5784.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 237925..240208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5784.t1 ID=Ggra5784.t1|Name=Ggra5784.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=742bp
MIVHVAYVLLLLQQVVRVFGDTGSPLYDVDKSGTVAVLVAVATLGRHDSY
EVQRPFCTNGRTPIIYTTVAPYVSWIRRTMGNATLSEFFIPPTGINNVVL
ATPKSSLPVAARASIIAVCTLVLAGLLGTLTFLCIVRRMRARRRRWRTGL
QAEDSFINSRAPDLIMADPFEGIQRERQSTMSLSQLSSNAIARLKRAKEY
STRSLAAIRARIIKEEEPLELPREAIPDAPEWVSSAWDKLFQPPSKSDLS
SIHKIPTQRVVDDVLSGADKSVEPSLQEVAFQAAREEANLEAAWHRLEMQ
TSLRSMSEAASANLSPPLSPLPQSPQSGSRGMFASLSRSGSKRGSASSSP
LRRALSSSRPPPGELAKADTLLAAFAPIDNESEHVEETVVDSAALRALAT
AKRPNVVNALRRMFSGPGMREPTSYSDGQSSGPSSSSRQGISSRQAGSSS
GEMLESSFTLSSKHSLARMDYFSENYSVSDSGSEGDGKELFERAFMAGNR
RYTDDRRSEFEETWSIPALRGYRKGPSLSLDELERRRSSHINEAGAVDAP
GKNKSLAIERRLMEVLNYESSSQVQDLWPGYRNDVSGMSDIAVQDADSAS
AVRTEQLSHFIVPSTSYESQTDSGIGSYLHTTELESVRFEGNEKDESSAP
LFGKNQTDHQEPPDSSASRDRSNRDEDSFQKTSSAMKAKFSPARFVSSTE
EANDNHVPHIVNSVHSSSPTQKFLSSDPPPVMFELLVELRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA