Ggra5779.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5779.t1
Unique NameGgra5779.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
BLAST of Ggra5779.t1 vs. uniprot
Match: A0A2V3IQ36 (VIP36-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ36_9FLOR)

HSP 1 Score: 276 bits (706), Expect = 9.320e-87
Identity = 149/263 (56.65%), Postives = 181/263 (68.82%), Query Frame = 0
Query:    2 GERYFAFAAEKGHFFASHEVHDAVFIHEPTSGAHTYRSDYYSQQYGTGFAAGTTDRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTDPDPAARVHRGDDAATSLSGSLDLQVYEVYNSMSSMLKGLGDQNAQETKLRLEGVRDITAQLIREMEKQKTDMSQLVSVLKHLKTTAGDLSYASDRFSSQLQGLHNSLRTLREKTHGISDSHDELHEELIDHHEGITEQSSGGSGTLVMFLLIQALLGGDIVGTSK 264
            G  + AFAAE GHFFA HEVH A FI E       YRSDY  Q YG    AGT ++Q                                     H+T+P+PA+R+HRG DAA+SL+GS+DLQVYEVYNSMSSMLK LGD  +Q+TKLRL+GVRD+T  LIREM+KQKT++  L+SVL+HLK TAGDL+YASDRFSSQ+QGLHNSLRTLREKT+ +SDSHD++HE L+DHHE ITEQ S G GT+ +FLL+Q LLG  +   +K
Sbjct:  243 GGGHLAFAAETGHFFALHEVHSAAFIDESPHSGEGYRSDYVPQDYG----AGTYNQQQVNMDNTNSQRTVSNQQSASSEKKPETPA--------HQTNPNPASRIHRGADAASSLAGSIDLQVYEVYNSMSSMLKNLGDSESQDTKLRLDGVRDVTTHLIREMDKQKTELGDLISVLRHLKQTAGDLTYASDRFSSQVQGLHNSLRTLREKTNSMSDSHDDMHEHLLDHHESITEQKSTGFGTIFVFLLVQGLLGTGVYFVNK 493          
BLAST of Ggra5779.t1 vs. uniprot
Match: E3SER7 (Lectin-like protein n=1 Tax=Hydropuntia fisheri TaxID=1232878 RepID=E3SER7_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 6.640e-69
Identity = 159/266 (59.77%), Postives = 182/266 (68.42%), Query Frame = 0
Query:    2 GERYFAFAAEKGHFFASHEVHDAVFIHEPTSGAHTYRSDYYSQQYGTGFAAGTTDRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTDPDPAARVHRGDDAATSLSGSLDLQVYEVYNSMSSMLKGLGDQNAQETKLRLEGVRDITAQLIREMEKQKTDMSQLVSVLKHLKTTAGDLSYASDRFSSQLQGLHNSLRTLREKTHGISDSHDELHEELIDHHEGITEQSSGGSGTLVMFLLIQALLGGDIVGTSKHTI 267
            G  + AFAAE GHF+A+HEVHDAVFI EP S   +Y+ DYYSQQYGTG         XXXXXXXXXXXXXXXXXXXXXXXXX            +RTDPDPAAR+HRG DA TSLSGSLDLQVYEVYNS+S+MLKGLGD+NAQETKL+LEGVRDIT QLIREMEKQK+D+SQLV VL+HLK                                        LH+ELIDHH+ I EQSSGGS TL+MF+++QALLG  +   +K T+
Sbjct:  244 GGGHLAFAAETGHFYANHEVHDAVFIDEPASATRSYQDDYYSQQYGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADKAPE-----YRTDPDPAARIHRGADAHTSLSGSLDLQVYEVYNSVSAMLKGLGDENAQETKLKLEGVRDITGQLIREMEKQKSDLSQLVDVLRHLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDELIDHHDSIMEQSSGGSSTLLMFVIVQALLGIGVYHVNKMTL 504          
BLAST of Ggra5779.t1 vs. uniprot
Match: R7QIS9 (L-type lectin-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIS9_CHOCR)

HSP 1 Score: 182 bits (463), Expect = 9.380e-51
Identity = 120/260 (46.15%), Postives = 157/260 (60.38%), Query Frame = 0
Query:    7 AFAAEKGHFFASHEVHDAVFIHEPTSGAHTYRSDYYSQQYGTGFAAGTTDRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHRTDPDPAARVHRGDDAATSLSGSLDLQVYEVYNSMSSMLKGLGDQNAQETKLRLEGVRDITAQLIREMEKQKTDMSQLVSVLKHLKTTAGDLSYASDRFSSQLQGLHNSLRTLREKTHGISDSHDELHEELIDHHEGITEQSSGGSGTLVMFLLIQALLGGDIVGTSKHT 266
            AFA E GHFFA HEVHDA FI E       YRS+Y SQQYG        D Q  XXXXXX  XXXXXXX                         DP+ RVH+ D+   SL+GSLDLQ+Y V++SM+  LK +G ++A +T  +L  VRD+T  L+ E+EKQ ++M +L   L H      DL+YASDRF+SQL+G+H SL+ LR+KT  + D HD+LH +L+DH E I E+   G+G L+MFL++Q LL   +   +K T
Sbjct:  254 AFAGETGHFFALHEVHDASFIDESDHSGEGYRSEYQSQQYG--------DPQQQXXXXXXSPXXXXXXXEAPRAPVSN----------------DPSTRVHKSDNPTESLAGSLDLQIYHVFDSMTQDLKNVGGKDAAQTTSKLTDVRDVTVHLVTELEKQSSNMKELAGTLSHXXXXXXDLTYASDRFTSQLRGMHASLKVLRDKTEKMGDKHDDLHADLLDHQESIAERQ--GNGVLIMFLVMQVLLVAVVYFLNKIT 487          
The following BLAST results are available for this feature:
BLAST of Ggra5779.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IQ369.320e-8756.65VIP36-like protein n=1 Tax=Gracilariopsis chorda T... [more]
E3SER76.640e-6959.77Lectin-like protein n=1 Tax=Hydropuntia fisheri Ta... [more]
R7QIS99.380e-5146.15L-type lectin-like domain-containing protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:217271..218089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5779.t1Ggra5779.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 217271..218089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5779.t1 ID=Ggra5779.t1|Name=Ggra5779.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
LGERYFAFAAEKGHFFASHEVHDAVFIHEPTSGAHTYRSDYYSQQYGTGF
AAGTTDRQQTQQQEQSHSSRGCVPPPSDAGSGTSSTDSAAQTPPPHRTDP
DPAARVHRGDDAATSLSGSLDLQVYEVYNSMSSMLKGLGDQNAQETKLRL
EGVRDITAQLIREMEKQKTDMSQLVSVLKHLKTTAGDLSYASDRFSSQLQ
GLHNSLRTLREKTHGISDSHDELHEELIDHHEGITEQSSGGSGTLVMFLL
IQALLGGDIVGTSKHTILTSRN*
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