Ggra5760.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5760.t2
Unique NameGgra5760.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Homology
BLAST of Ggra5760.t2 vs. uniprot
Match: R7QA73 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA73_CHOCR)

HSP 1 Score: 293 bits (750), Expect = 4.500e-95
Identity = 136/249 (54.62%), Postives = 183/249 (73.49%), Query Frame = 0
Query:    1 MRDYVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEI-RRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLL 248
            M +Y GP SR+ W+ D FTLPHNAVRREC+DLY+IL SMA+ +   DI+ DD++D+E WW  A  FF  YFE+ER ILFPWVD+AG+ D EVQLAL KMR +K++LQEHL  VD VWNEK   S  +MF L+Y+AVD FVPRL NYF DQEVLLP I + +YK E+R ++DKE+  + MG  + R++++  +H L+LLIRW+ +P+ +R W G+ LNS AR  Y +WY  ++  H+R VKT +NR +++
Sbjct:  143 MAEYSGPVSRTKWYIDGFTLPHNAVRRECIDLYEILTSMARCKGTGDITRDDINDIEDWWQTASSFFNCYFEMERTILFPWVDAAGTSDEEVQLALSKMRSLKDRLQEHLVKVDNVWNEKPLSSPEEMFALLYKAVDLFVPRLMNYFADQEVLLPTIVRGFYKLEDRTKMDKEMVNVFMGGPLTRKSKEEQHHNLILLIRWIGNPRQLRAWIGKNLNSNARAQYGNWYNQYQEHHYRFVKTLRNRSKVM 391          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A1X6P8M3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8M3_PORUM)

HSP 1 Score: 158 bits (400), Expect = 1.080e-40
Identity = 88/249 (35.34%), Postives = 132/249 (53.01%), Query Frame = 0
Query:    4 YVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIA--------ALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNR 244
            Y GP S+S WH +  T+PHNA+RRE  DLY++L++M      +     D  DL  WW V   F + + +VE+R+LFPWV++ G+HD E+Q  LR++R  KE +   L  +    +        +MF L+Y+ VDT  PRL  YF  QE + PA  ++ Y A++ +R++KE+         A L G        +    L  L R M   K ++VW  R L++ AR  Y  W + F   H  +V+ F+ R
Sbjct:  531 YSGPASKSNWHVNFLTMPHNALRREVSDLYEMLLAMVDFGGGL--KKADFRDLRSWWSVFARFARDWLDVEKRLLFPWVNATGAHDWELQATLRELRTTKEFIDMKLDELAIYLDGFESMPPTEMFSLLYKCVDTLAPRLMGYFCTQERVFPANVRATYSADDVVRLEKEMVEALLHGPPAALAGGGRSTTGGSGQDSLCALSRGMTDAKHLKVWVQRNLSATARLSYGKWVKSFNESHRGVVRNFKER 777          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A2V3IU43 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU43_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 3.420e-28
Identity = 72/244 (29.51%), Postives = 127/244 (52.05%), Query Frame = 0
Query:    8 GSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLLAAT 251
            GS   W++DVF LPHNA+R E MDLY IL S+   R+   +S  DV +L  +W     F   YFE+E +I+FP++ +A     E++   + ++  +++L+  L GV          +  ++   +Y+ +  ++P+L +Y E QE +LP + + Y  A+ R+ +++  A  ++       R+     + +L RW+    +++VW    L+S A++ +  W    E  H  I K FQ R R +  T
Sbjct:  193 GSTDTWYSDVFVLPHNAIRWEIMDLYTILSSV--QRRWFSLSMLDVAELADYWQTFEVFVAQYFEIEDQIVFPFLLNAAQQSSELKRYHKVVKYNRDRLENLLMGVGSTLELFNTCNAGEILPKLYQQLCDYLPKLLDYMEQQEDVLPNVFRQYCDADARVLLNRAAANFVV--RAANGREG----IAILTRWIEDSMILQVWKNENLSSRAQSSHKRWILNLEATHVDIAKRFQRRLRSIPKT 428          
BLAST of Ggra5760.t2 vs. uniprot
Match: R7QC38 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC38_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 3.400e-27
Identity = 71/241 (29.46%), Postives = 123/241 (51.04%), Query Frame = 0
Query:    8 GSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLL 248
            G R  W +DVF LPHNA+R E MDLY I+ S+   R+   ++  DV +L ++W V   F   YFE+E +I+FP++    S   E+    + ++  +++L+  L  V             ++   VY  +  ++P+L +Y E QE +LP + + Y + E+R  I++  A  ++       RD     + +L RW+    ++++W    L+S A++ +  W    E+ H  I + FQ R R L
Sbjct:   94 GGRDTWASDVFVLPHNAIRWEIMDLYTIISSI--QRRWSALTMVDVWELSEYWEVFEVFVAQYFEIEDQIVFPFLLDLASDSTELNRYHKVVKYNRDRLEAMLLDVGGTLELFNSAPAGEVLPKVYSQLAEYLPKLLDYMEQQEDVLPRVFEEYGQPEDRALINRASANFIV--RAANGRDG----IAILTRWIEDSMILQMWKNENLSSRAQSSHKRWIANLESNHVDIARRFQRRMRSL 326          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A5J4YY07 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY07_PORPP)

HSP 1 Score: 108 bits (271), Expect = 2.510e-23
Identity = 67/234 (28.63%), Postives = 112/234 (47.86%), Query Frame = 0
Query:   13 WHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRR 246
            W  DVF LPHNA++RE +DLY IL S+   R+ +D+   D+DD   WW V   F   YF++E +I+FPW+ S      + + +  +   +K +L + +  VD    + ++    ++   + + +D F PRL  Y  +QE  LP      + A ++  +D+++   +M  +        N  + ++ RW+N  +L + W    L   AR  Y  W       H  IV     R R
Sbjct:  699 WSMDVFALPHNALKRELLDLYKILGSL--QRRMIDLRHSDIDDFYNWWEVFEAFILDYFDMEEKIVFPWIQSRIPLG-KTKFSQTQRSILKGRLSKLMHDVDECEYKFSYLPAGEVLPRLLQCMDKFSPRLLEYLGEQERRLPRALDKKFAAADKAVLDQKLMDYMMQAKYT------NELVTIMTRWLNDAQL-KEWKRTNLKGTARLSYTMWKNSLYKNHVSIVTEMIQRNR 922          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A7S1XGN0 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGN0_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 6.260e-23
Identity = 66/233 (28.33%), Postives = 120/233 (51.50%), Query Frame = 0
Query:   13 WHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGS---HDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNM-YPSWYQMFETQHHRIVKTF 241
            W  +VF+LPHNA+RRE +DLY IL ++   +++   + ++ +    WW V   F + YF++E RIL P +  A     H  ++ + + +M   + KL + L  V+ V  +       D+F L+ +A+D FVP L +YF ++E +LP+    ++       + K++    M D +   R+ P   +V+L  WM+  + +  W  + L  + R + +  W   +   H +IV+ F
Sbjct:   52 WAQEVFSLPHNAIRRELIDLYTILGAVY--KRNARTAREEDEKFSHWWSVFSAFVEEYFDIEARILLPLIGPAEEDPVHKQDIAVLMYQMEDARIKLVKKLREVNEVVEKLFVLPMKDVFPLLCKALDHFVPMLLDYFIEEEDVLPSYILGFHSL-----VMKDVILQKMADFVLVGRE-PQLFIVMLSAWMDDKEQLSNWKKKALRGYNRFINFQRWESKYLRTHKKIVEDF 276          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A5J4Z8B5 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8B5_PORPP)

HSP 1 Score: 105 bits (261), Expect = 7.040e-23
Identity = 66/236 (27.97%), Postives = 118/236 (50.00%), Query Frame = 0
Query:   12 LWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDL-EVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHC--LVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNR 244
            LW  DV  + HNA+++E MD+Y+++  M   R  M +  DDV    +WW V   F   YFE+E +++FP++  A   D  + +L+ ++    K ++ + LA +D + +    +   +      E +D F PRL  YF  QE ++P   Q +++ ++++ I +        D +++ +DA +    +V+  RWM   +L ++W    L    R  YP+W    E  H  I   F +R
Sbjct:  111 LWSMDVLAVYHNAIKKEVMDMYNMVECML--RFQMSLGYDDVTRFFEWWDVFESFLMDYFELEEKVIFPYI--AEKFDFADTKLSRQERMLTKARITQFLAQIDDMEDIFINRPPGECLPRFVEFLDKFTPRLLGYFNTQETIVPRTLQKFFQPDDKVIIQQTCV-----DWLKKTKDATDFAENMVVQSRWMPEAQL-QLWKRDSLRGMQRVAYPAWRGRVEAYHFVIPAEFGHR 336          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A7S0ZB72 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB72_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 1.980e-19
Identity = 71/243 (29.22%), Postives = 117/243 (48.15%), Query Frame = 0
Query:   13 WHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNE--KTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMN----SPKLVRVWTGRYLN----SWARNMYPSWYQMFETQHHRIVKTFQNRR 245
            W  DVF+LPHNA+RRE +D Y IL +M   R  +++++ D+    QWW V  +FF+ Y + E  +L+PW++S     L   L  +K   +KE L+  L  +     +  K  +   +   L+  AVD        YF  QE ++P +  S Y  +++   D+     L+  E           + L+ RW+      PK +  W  RY N    +W R  Y  WY+  E++H +++  F+ +R
Sbjct:  159 WSMDVFSLPHNAIRRELLDCYIILYAMDVRR--LELTSKDIASFFQWWTVFVKFFEVYLDAEDVVLYPWIESGVK--LSGLLEAKKRAKIKEHLRLILGLLTNAEAKLIKMAEDDGEPVFLMKRAVDKISLLTQEYFVAQERVIPRMLGSVYTLKDKRAYDRRFINFLLKSE------QSGFNVALVSRWLQPDVRQPKQLLEW--RYDNLGPINWTR--YGIWYKQVESKHIKVLAYFRAKR 387          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A5J4YYV5 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYV5_PORPP)

HSP 1 Score: 94.0 bits (232), Expect = 2.630e-18
Identity = 62/241 (25.73%), Postives = 115/241 (47.72%), Query Frame = 0
Query:    8 GSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWV----DSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNR 244
            GS  LW  D   LPHNA+RRE MD+Y IL++++  +   D++ DD+  ++  W V  +F + YF  E + LFP +    DSA    ++        R  KEK+Q+ L          T ++  +   L+   +D  +P L +Y  ++E+ LPA  + Y   +++ +++  +  + +       + +      +L+R +   +L   W   ++   ++  Y S Y+ F   H   V++  NR
Sbjct:  283 GSSVLWDRDGLVLPHNAIRREMMDMYQILIALSVLK---DLTDDDMKRVKAHWDVFAKFIEVYFAFEEQHLFPTICMIDDSASERPIQ------DFRYQKEKIQKALKSGSNAVAVCTTRTDKETMGLMVTRLDHVLPELLHYMNNEELKLPAYIKKYGDEKKKYQLEDAMFHMCV-------KSSEPTLSAILVRAIEDQELANAWKKEHIKGMSKLKYNSGYKKFLDIHWSTVESLYNR 507          
BLAST of Ggra5760.t2 vs. uniprot
Match: A0A2V3IUV6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV6_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 3.550e-17
Identity = 61/241 (25.31%), Postives = 107/241 (44.40%), Query Frame = 0
Query:    4 YVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISADDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMRGMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQEVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRWMNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNR 244
            Y  P S   WH+D +TL HNA++R+   LYDI+ S+A SR    + A+ +D   +WW V   F   YF+ E  +L  W  +  S           +  +K    +H+  +   +  + +    D+F  +   V+  VP L +Y    +  L  + ++ +  +  + + +   A +   E       P+  LVLL  WM S ++   W   Y+  ++R ++  W +     H  IV  F+ R
Sbjct:   54 YAAPAS---WHSDAYTLAHNAIKRQLASLYDIMDSIA-SRIHHVVGAE-LDTFARWWRVLEPFITEYFDFEADVLLNWAAADPS----------ALAHLKHLCLDHIRQLCGTFELRRYVDPTDLFCTIVREVNALVPHLLHYMSALDAHLSPLIRARHSPQSVVALTRSYVAYVKKGE------NPHVHLVLLTTWMKS-RVKDKWINTYVRGFSRLLFRRWERYTARTHIAIVAAFRTR 272          
The following BLAST results are available for this feature:
BLAST of Ggra5760.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
R7QA734.500e-9554.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P8M31.080e-4035.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IU433.420e-2829.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC383.400e-2729.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YY072.510e-2328.63Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1XGN06.260e-2328.33Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A5J4Z8B57.040e-2327.97Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZB721.980e-1929.22Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YYV52.630e-1825.73Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3IUV63.550e-1725.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.520nmb1532 protein domain likecoord: 13..177
e-value: 1.1E-7
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:681969..682727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2Ggra5760.t2Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 681969..682727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MRDYVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISA
DDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMR
GMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQ
EVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRW
MNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLLAA
TH*
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