Ggra5760.t2 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5760.t2
Unique NameGgra5760.t2
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:681969..682727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5760Ggra5760Gracilaria gracilis GNS1m malegenetig00000897_pilon 681969..684587 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2.stop1Ggra5760.t2.stop1Gracilaria gracilis GNS1m malestop_codontig00000897_pilon 681969..681971 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2.CDS1Ggra5760.t2.CDS1Gracilaria gracilis GNS1m maleCDStig00000897_pilon 681969..682727 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2.exon1Ggra5760.t2.exon1Gracilaria gracilis GNS1m maleexontig00000897_pilon 681969..682727 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2.start1Ggra5760.t2.start1Gracilaria gracilis GNS1m malestart_codontig00000897_pilon 682725..682727 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5760.t2Ggra5760.t2Gracilaria gracilis GNS1m malepolypeptidetig00000897_pilon 681969..682727 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=253bp
MRDYVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISA
DDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMR
GMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQ
EVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRW
MNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLLAA
TH*
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spliced messenger RNA

>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000897_pilon:681969..682727- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGGACTACGTGGGCCCTGGATCTCGGTCGCTTTGGCATACCGACGT
TTTCACGCTCCCCCACAATGCAGTACGAAGAGAATGCATGGATCTGTACG
ACATACTTGTGTCGATGGCCCAATCGAGGAAGGACATGGATATTTCTGCC
GATGACGTTGACGATTTAGAGCAGTGGTGGCTTGTGGCAAGAGAGTTTTT
CAAGTTTTACTTCGAGGTGGAACGTAGGATTTTATTTCCTTGGGTGGACT
CCGCCGGGTCACATGACTTGGAAGTGCAACTGGCCCTGCGGAAAATGCGA
GGGATGAAGGAGAAACTACAAGAGCATTTGGCTGGTGTGGATCGAGTATG
GAACGAGAAGACGTTCAAGTCTAAGGCAGATATGTTTCTATTGGTATACG
AAGCAGTTGACACTTTCGTCCCCCGGCTTTTTAATTACTTCGAAGACCAA
GAAGTGTTACTTCCTGCTATCGCTCAGAGTTATTACAAAGCCGAAGAACG
CATCCGCATTGACAAGGAAATCGCCGCTTTGTTAATGGGAGATGAAATAC
GGCGCAACAGAGATGCTCCGAATCACTGTCTGGTGCTCTTAATTCGATGG
ATGAACAGCCCGAAGTTGGTACGCGTATGGACAGGTCGTTATTTGAACAG
TTGGGCAAGAAACATGTACCCCAGCTGGTATCAGATGTTTGAAACGCAGC
ATCATCGCATTGTGAAAACGTTCCAAAATCGCCGGAGACTGTTGGCGGCG
ACACATTGA
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protein sequence of Ggra5760.t2

>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MRDYVGPGSRSLWHTDVFTLPHNAVRRECMDLYDILVSMAQSRKDMDISA
DDVDDLEQWWLVAREFFKFYFEVERRILFPWVDSAGSHDLEVQLALRKMR
GMKEKLQEHLAGVDRVWNEKTFKSKADMFLLVYEAVDTFVPRLFNYFEDQ
EVLLPAIAQSYYKAEERIRIDKEIAALLMGDEIRRNRDAPNHCLVLLIRW
MNSPKLVRVWTGRYLNSWARNMYPSWYQMFETQHHRIVKTFQNRRRLLAA
TH*
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mRNA from alignment at tig00000897_pilon:681969..682727-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000897_pilon:681969..682727- (Gracilaria gracilis GNS1m male)
ATGAGGGACTACGTGGGCCCTGGATCTCGGTCGCTTTGGCATACCGACGT
TTTCACGCTCCCCCACAATGCAGTACGAAGAGAATGCATGGATCTGTACG
ACATACTTGTGTCGATGGCCCAATCGAGGAAGGACATGGATATTTCTGCC
GATGACGTTGACGATTTAGAGCAGTGGTGGCTTGTGGCAAGAGAGTTTTT
CAAGTTTTACTTCGAGGTGGAACGTAGGATTTTATTTCCTTGGGTGGACT
CCGCCGGGTCACATGACTTGGAAGTGCAACTGGCCCTGCGGAAAATGCGA
GGGATGAAGGAGAAACTACAAGAGCATTTGGCTGGTGTGGATCGAGTATG
GAACGAGAAGACGTTCAAGTCTAAGGCAGATATGTTTCTATTGGTATACG
AAGCAGTTGACACTTTCGTCCCCCGGCTTTTTAATTACTTCGAAGACCAA
GAAGTGTTACTTCCTGCTATCGCTCAGAGTTATTACAAAGCCGAAGAACG
CATCCGCATTGACAAGGAAATCGCCGCTTTGTTAATGGGAGATGAAATAC
GGCGCAACAGAGATGCTCCGAATCACTGTCTGGTGCTCTTAATTCGATGG
ATGAACAGCCCGAAGTTGGTACGCGTATGGACAGGTCGTTATTTGAACAG
TTGGGCAAGAAACATGTACCCCAGCTGGTATCAGATGTTTGAAACGCAGC
ATCATCGCATTGTGAAAACGTTCCAAAATCGCCGGAGACTGTTGGCGGCG
ACACATTGA
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Coding sequence (CDS) from alignment at tig00000897_pilon:681969..682727-

>Ggra5760.t2 ID=Ggra5760.t2|Name=Ggra5760.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=759bp|location=Sequence derived from alignment at tig00000897_pilon:681969..682727- (Gracilaria gracilis GNS1m male)
ATGAGGGACTACGTGGGCCCTGGATCTCGGTCGCTTTGGCATACCGACGT
TTTCACGCTCCCCCACAATGCAGTACGAAGAGAATGCATGGATCTGTACG
ACATACTTGTGTCGATGGCCCAATCGAGGAAGGACATGGATATTTCTGCC
GATGACGTTGACGATTTAGAGCAGTGGTGGCTTGTGGCAAGAGAGTTTTT
CAAGTTTTACTTCGAGGTGGAACGTAGGATTTTATTTCCTTGGGTGGACT
CCGCCGGGTCACATGACTTGGAAGTGCAACTGGCCCTGCGGAAAATGCGA
GGGATGAAGGAGAAACTACAAGAGCATTTGGCTGGTGTGGATCGAGTATG
GAACGAGAAGACGTTCAAGTCTAAGGCAGATATGTTTCTATTGGTATACG
AAGCAGTTGACACTTTCGTCCCCCGGCTTTTTAATTACTTCGAAGACCAA
GAAGTGTTACTTCCTGCTATCGCTCAGAGTTATTACAAAGCCGAAGAACG
CATCCGCATTGACAAGGAAATCGCCGCTTTGTTAATGGGAGATGAAATAC
GGCGCAACAGAGATGCTCCGAATCACTGTCTGGTGCTCTTAATTCGATGG
ATGAACAGCCCGAAGTTGGTACGCGTATGGACAGGTCGTTATTTGAACAG
TTGGGCAAGAAACATGTACCCCAGCTGGTATCAGATGTTTGAAACGCAGC
ATCATCGCATTGTGAAAACGTTCCAAAATCGCCGGAGACTGTTGGCGGCG
ACACATTGA
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