Ggra5752.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5752.t1
Unique NameGgra5752.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length523
Homology
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BLAST of Ggra5752.t1 vs. uniprot
Match: A0A2V3IS76 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS76_9FLOR)

HSP 1 Score: 358 bits (920), Expect = 2.200e-115
Identity = 242/488 (49.59%), Postives = 295/488 (60.45%), Query Frame = 0 
Query:   55 LHHNGNTPCRTPTVTPFKALASPFTVTTPFTAPSTPYSHSTVTPIPLRLSPTQTPTSLQGNSSVASKPPVNPTNFNRVKTFQKESQTPVNHLLTPKQVRELRRLCRKTANRAEFEDRLIQIRQVASIAAMASSSLHLFDPENPRSGLALRVWVETHRAEGADWRDERPLSDSAVDELRRWDRLLKGWARVRFETSNPGESDVP--PHTYAGSGSNIVETVLHPIRLQFEQLSVGTSPITPLVRVKHAET----GETRAV---EHHSIAQLTSPTTPDEQGASFWRSPHVDVGGVGGGMRNSQSLGDVHGTISGRNAMHVVQSAWSKVSPSVMRDCVGE-RKPLEEVSINKVGDLINVTVPAMTRQQSSAPL-RSLAKSSSCGMNASVVYGEENLLD------------IGQMKSWRNVVLDSTKYGSRVDDISIGAKHLH-SYGENVDNAYGD--GCANIHNLTPSTRADLDWGRLRGGEGSESSFSS 516
            L H+  TP +TP VTPFKALASPFT + PFTAP+TPYS + +TP  LRLSPT TP +      + + P   P    +  +    S     HLLTPKQVRELRRLCRKTANRA+FEDRLIQIRQVASIAAMASSSLHLFDP+NP SG ALR WV+++RA+GADWRDERPLSD A++ELRRWDRLLK WARVRF+T N  +S  P    T     S+  ET L P+RLQFE+LSVG SPITP  R K   +    G + A+     +SI  LTSP TPDE+ A F+ SP   V  V     +   L   +GT +  NAM   +S WSK   +       E RKPL EVSINKVGDLINVTVP  T   SS+   R    + +   N   +  +EN+                  KSWRN +L S+  GS   +  +GA  ++ S   +V N   +  G  +    TPS R DLDW RLRGG+G  ++ SS
Sbjct:    3 LFHDPPTPAKTPNVTPFKALASPFTASAPFTAPTTPYSSAELTPHQLRLSPTLTPQTSHAPQHLLTSPVFTPVT--KPLSVDPVSTPAQPHLLTPKQVRELRRLCRKTANRAQFEDRLIQIRQVASIAAMASSSLHLFDPDNPHSGHALRAWVDSNRADGADWRDERPLSDHAIEELRRWDRLLKAWARVRFDTHNLTDSATPHPSSTVNARHSDEHETPLRPVRLQFERLSVGASPITPHYRTKLVASANAVGASPAICQPAEYSIMPLTSPLTPDERSAPFFHSPRP-VAHV-----SHSPLPATYGTDA--NAM---RSVWSKPPLATTLSRRAELRKPLCEVSINKVGDLINVTVPPSTPHASSSVYARDGVGNVAVRSNNGCMSEQENVFPGAAAKRASMSHASNTAKSWRNALLKSS--GSAAQEDGVGAMRVNASVNASVKNVACNVSGARDAVVTTPS-RTDLDWRRLRGGDGGATTSSS 474
The following BLAST results are available for this feature:
BLAST of Ggra5752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IS762.200e-11549.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:647213..648781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5752.t1Ggra5752.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 647213..648781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5752.t1 ID=Ggra5752.t1|Name=Ggra5752.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=523bp
MDPLRNRSLQLPSSSPTPSLICVGGMLRVAETPASNAVVSESLASHSSVQ
PPNLLHHNGNTPCRTPTVTPFKALASPFTVTTPFTAPSTPYSHSTVTPIP
LRLSPTQTPTSLQGNSSVASKPPVNPTNFNRVKTFQKESQTPVNHLLTPK
QVRELRRLCRKTANRAEFEDRLIQIRQVASIAAMASSSLHLFDPENPRSG
LALRVWVETHRAEGADWRDERPLSDSAVDELRRWDRLLKGWARVRFETSN
PGESDVPPHTYAGSGSNIVETVLHPIRLQFEQLSVGTSPITPLVRVKHAE
TGETRAVEHHSIAQLTSPTTPDEQGASFWRSPHVDVGGVGGGMRNSQSLG
DVHGTISGRNAMHVVQSAWSKVSPSVMRDCVGERKPLEEVSINKVGDLIN
VTVPAMTRQQSSAPLRSLAKSSSCGMNASVVYGEENLLDIGQMKSWRNVV
LDSTKYGSRVDDISIGAKHLHSYGENVDNAYGDGCANIHNLTPSTRADLD
WGRLRGGEGSESSFSSLNGNKL*
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