Ggra5744.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A2V3IEH5 (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEH5_9FLOR) HSP 1 Score: 348 bits (894), Expect = 3.010e-111 Identity = 169/200 (84.50%), Postives = 181/200 (90.50%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVILGRAMPDVRDGLK VHR ILYAMHVLGL+P+ QFRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSMS+PL++GHGNFGSTDGDPPAAMRYT+CKLSRLAT TFLSDIDCNTVSF PNFD SE+EPLVLPVK+PNL VNGGSGIAV MATN PPHNL ELVSAL ALI DP+++ E+LFE VPAPDF GG IL
Sbjct: 83 MSVILGRAMPDVRDGLKPVHRRILYAMHVLGLAPSGQFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQPFSMSIPLINGHGNFGSTDGDPPAAMRYTECKLSRLATDTFLSDIDCNTVSFMPNFDSSEHEPLVLPVKVPNLLVNGGSGIAVGMATNIPPHNLGELVSALTALIEDPDVSDERLFEFVPAPDFPTGGLIL 282
BLAST of Ggra5744.t1 vs. uniprot
Match: R7QQ20 (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ20_CHOCR) HSP 1 Score: 307 bits (787), Expect = 2.180e-95 Identity = 150/200 (75.00%), Postives = 168/200 (84.00%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVILGRAMPDVRDGLK VHR IL+AMH LGLSP QFRK ARVVGEVLG YHPHGDTAVYDALVRMAQ F+MS+PLV+GHGNFGSTDGDP AAMRYT+CKL+ L FL+D+ +TVS+ PNFDGSE+EPLVLP K+PNL VNG SGIAV MATN PPHNL E+V+AL A+I DP ++ + L LVPAPDF GGQIL
Sbjct: 118 MSVILGRAMPDVRDGLKPVHRRILFAMHELGLSPGGQFRKSARVVGEVLGKYHPHGDTAVYDALVRMAQPFAMSIPLVNGHGNFGSTDGDPAAAMRYTECKLAHLTRDVFLADMGRDTVSYSPNFDGSESEPLVLPAKVPNLLVNGSSGIAVGMATNIPPHNLGEVVAALKAIIADPELSDDDLLALVPAPDFPTGGQIL 317
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A7S0JD38 (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JD38_9EUKA) HSP 1 Score: 280 bits (717), Expect = 1.940e-92 Identity = 137/200 (68.50%), Postives = 156/200 (78.00%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVI+ RA+PD RDGLK VHR ILYAMHVL L P RKCARVVGEVLG YHPHGD++VY+ALVRMAQ FS+ PLVDGHGNFGS D DPPAAMRYT+C+LS+LA + L+DI+ +TV F NFD SE EP+V P KLP L +NG +GIAV MATN PPHNL ELV AL AL+RD +A E LF LV APDF GG I+
Sbjct: 38 MSVIMSRALPDARDGLKPVHRRILYAMHVLNLQPDTPHRKCARVVGEVLGKYHPHGDSSVYEALVRMAQPFSLRAPLVDGHGNFGSIDPDPPAAMRYTECRLSKLARDSLLADIELDTVDFVDNFDASEREPVVFPAKLPLLLLNGAAGIAVGMATNCPPHNLGELVDALQALLRDRTVADEVLFSLVRAPDFPSGGTIM 237
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A7S1TC99 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TC99_9RHOD) HSP 1 Score: 285 bits (730), Expect = 2.830e-92 Identity = 136/200 (68.00%), Postives = 159/200 (79.50%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVILGRA+PD+RDGLK VHR IL+AMH L L +RKCARVVGEVLG YHPHG+TA+YD+LVRMAQ FS+ VPLV GHGNFGSTDGDPPAAMRYT+C+LS A L DI+ TV F NFDGS EP+VLP ++PNL +NG SGIAV MATN PP NL+EL+ AL+A+IRDP+++ L EL+P PDF GGQIL
Sbjct: 124 MSVILGRALPDIRDGLKPVHRRILFAMHELRLVADGPYRKCARVVGEVLGKYHPHGETAIYDSLVRMAQDFSLGVPLVAGHGNFGSTDGDPPAAMRYTECRLSSFAQACLLEDIEMETVDFLDNFDGSLQEPVVLPSRVPNLLLNGSSGIAVGMATNIPPFNLLELLEALVAMIRDPHVSDAVLMELLPGPDFPTGGQIL 323
BLAST of Ggra5744.t1 vs. uniprot
Match: DNA topoisomerase (ATP-hydrolyzing) subunit A n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000B32D11A (DNA topoisomerase (ATP-hydrolyzing) subunit A n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000B32D11A) HSP 1 Score: 296 bits (759), Expect = 4.070e-92 Identity = 141/200 (70.50%), Postives = 160/200 (80.00%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVI+GRA+PD RDGLK VHR ILYAMH LGL+P FRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSM PLV+GHGNFGS D DPPAAMRYT+ +L RL+T + L DID TV F NFDGS+ EP+VLP +LP L +NG SGIAV MATN PPHNL EL+ LIAL+RDP++ + +L E +P PDF GGQIL
Sbjct: 26 MSVIVGRALPDARDGLKPVHRRILYAMHELGLTPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRAPLVEGHGNFGSVDNDPPAAMRYTESRLQRLSTDSLLQDIDSETVDFADNFDGSQQEPVVLPARLPQLLLNGSSGIAVGMATNIPPHNLGELIDGLIALVRDPDLDNARLMEYIPGPDFPTGGQIL 225
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A6P0VQR9 (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0VQR9_9CYAN) HSP 1 Score: 285 bits (728), Expect = 8.830e-92 Identity = 134/200 (67.00%), Postives = 155/200 (77.50%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVI+GRA+PD RDGLK VHR IL+AMH LGL+P FRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSM +PL++GHGNFGS D DPPAAMRYT+C+L +AT L DI+ TV F NFDGS+ EP VLP ++P L +NG SGIAV MATN PPHNL EL+ L+ALI +P I +L + +P PDF G QIL
Sbjct: 26 MSVIVGRALPDARDGLKPVHRRILFAMHELGLTPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRLPLINGHGNFGSVDNDPPAAMRYTECRLQAIATDALLRDIESETVDFIDNFDGSQQEPTVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELIDGLVALIHNPEITDLELMQYIPGPDFPTGSQIL 225
BLAST of Ggra5744.t1 vs. uniprot
Match: B4VPJ9 (DNA gyrase subunit A n=3 Tax=Coleofasciculus chthonoplastes TaxID=64178 RepID=B4VPJ9_9CYAN) HSP 1 Score: 294 bits (752), Expect = 3.050e-91 Identity = 140/206 (67.96%), Postives = 161/206 (78.16%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQILVRRARK 206
MSVI+GRA+PD RDGLK VHR ILYAMH LGL+P FRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSM PL++GHGNFGS D DPPAAMRYT+C+L LAT + L DI+ TV F NFDGS+ EP+VLP ++P + +NG SGIAV MATN PPHNL ELV L+ALI +P I ++L + +PAPDF GGQIL R K
Sbjct: 1 MSVIVGRALPDARDGLKPVHRRILYAMHELGLTPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDPPAAMRYTECRLQSLATDSLLRDIESETVDFLDNFDGSQQEPIVLPARVPQILLNGSSGIAVGMATNIPPHNLGELVDGLVALIHNPEITEKELMQYIPAPDFPTGGQILGRSGIK 206
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A352APN8 (DNA gyrase subunit A n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352APN8_9CYAN) HSP 1 Score: 293 bits (751), Expect = 6.270e-91 Identity = 141/207 (68.12%), Postives = 159/207 (76.81%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQILVRRARKK 207
MSVI+GRA+PD RDGLK VHR ILYAMH LGLSP FRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSM +PL++GHGNFGS D DPPAAMRYT+C+L +AT L DI+ TV F NFDGS+ EP VLP ++P L +NG SGIAV MATN PPHNL EL+ L+ALIR+P I QL +P PDF GGQIL A K+
Sbjct: 26 MSVIVGRALPDARDGLKPVHRRILYAMHELGLSPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRLPLINGHGNFGSVDNDPPAAMRYTECRLKSIATDALLRDIESETVDFIDNFDGSQQEPTVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELIDGLVALIRNPEITDTQLMRYIPGPDFPTGGQILGTSAIKE 232
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A3M1T295 (DNA gyrase subunit A n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T295_9CYAN) HSP 1 Score: 293 bits (751), Expect = 6.730e-91 Identity = 141/200 (70.50%), Postives = 156/200 (78.00%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQIL 200
MSVI+GRA+PDVRDGLK VHR ILYAMH LGL P FRKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSM PL++GHGNFGS D DPPAAMRYT+C+L L+ L DID TV F NFDGS+ EPLVLP ++P L +NG SGIAV MATN PPHNL ELV LIALIR+P + QL + +P PDF GGQIL
Sbjct: 26 MSVIVGRALPDVRDGLKPVHRRILYAMHELGLMPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDPPAAMRYTECRLQALSCDALLQDIDSETVDFGDNFDGSQQEPLVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELVDGLIALIRNPELTDTQLMQYIPGPDFPTGGQIL 225
BLAST of Ggra5744.t1 vs. uniprot
Match: A0A1Z9JEG1 (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Cyanobacteria bacterium TMED177 TaxID=1986677 RepID=A0A1Z9JEG1_9CYAN) HSP 1 Score: 286 bits (732), Expect = 8.020e-91 Identity = 135/202 (66.83%), Postives = 158/202 (78.22%), Query Frame = 0
Query: 1 MSVILGRAMPDVRDGLKTVHRCILYAMHVLGLSPTCQFRKCARVVGEVLGNYHPHGDTAVYDALVRMAQSFSMSVPLVDGHGNFGSTDGDPPAAMRYTDCKLSRLATYTFLSDIDCNTVSFKPNFDGSENEPLVLPVKLPNLFVNGGSGIAVAMATNTPPHNLIELVSALIALIRDPNIAHEQLFELVPAPDFLIGGQILVR 202
MSVI+GRA+PD RDGLK VHR ILYAM+ LGL+ +RKCARVVGEVLG YHPHGDTAVYDALVRMAQ FSMS+PL+DGHGNFGS D DPPAAMRYT+ +L L T + L DI+ TV F NFDGS+ EP VLP ++P L +NG +GIAV MATN PPHNL EL+S L+ALI +P + ++L L+P PDF GGQIL R
Sbjct: 37 MSVIVGRALPDARDGLKPVHRRILYAMYELGLTSDRPYRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMSMPLIDGHGNFGSVDNDPPAAMRYTESRLQSLTTDSLLEDIEAETVDFADNFDGSQQEPTVLPARIPQLLLNGSAGIAVGMATNIPPHNLNELISGLLALIENPEXSEQELIRLIPGPDFPTGGQILGR 238 The following BLAST results are available for this feature:
BLAST of Ggra5744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5744.t1 ID=Ggra5744.t1|Name=Ggra5744.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bpback to top |