Ggra5741.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5741.t1
Unique Name	Ggra5741.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	303

Homology

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BLAST of Ggra5741.t1 vs. uniprot
Match: A0A2V3J3L7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L7_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 4.480e-26
Identity = 62/134 (46.27%), Postives = 86/134 (64.18%), Query Frame = 0

Query:    1 MKTTDRPGHPTGALISARVVFNRLYQELLGR-SQPYDDNFPIYAELSNAVKDKIRRFLYERLKLQRGKLTFRAIRSQFYSQLFSLQRGLLDTFPLLCAAQ---------KEAAQRDKQAVAEATKRKKNCLDND 124
            +K +DRPG PTG  +SAR +FN LYQE + R S    D+FPIY  ++N+VKD IR FLY RL ++RG  T+ ++R +F SQ   L+R L++ +P+L A+Q         KEA QRDK+A  EA+KR+      D
Sbjct:   11 LKASDRPGVPTGTTVSARALFNHLYQERMRRDSNAMRDDFPIYTAMANSVKDDIRSFLYHRLGVERGTRTYSSVRREFPSQFIQLKRKLVELYPVLAASQSGWVMNEFNKEAIQRDKKAAPEASKRRAKTAQRD 144

[Close]

BLAST of Ggra5741.t1 vs. uniprot
Match: A0A2V3IHB9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB9_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 1.890e-18
Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0

Query:    8 GHPTGALISARVVFNRLYQELLGRS-QPYDDNFPIYAELSNAVKDKIRRFLYERLKLQRGKLTFRAIRSQFYSQLFSLQRGLLDTFPLLCAAQK---------EAAQRDKQAVAEATKRKKNCLDNDGLPDTQIGP 133
            G   GA ++AR +FN +YQ+L+GR+ +  + +FP+Y E++N VKD +R F+Y+RL + RG  T+ +++ ++   L  L+  LL+ +P+L AAQ+         EA QRD +AV+EA KRK+  +   G     + P
Sbjct:   86 GDAIGAAVTARTLFNCMYQKLMGRTFETMEADFPLYTEMANCVKDDVRVFVYQRLNITRGSRTYSSVKCKYAKHLSHLKDRLLENYPVLKAAQRGWVMDAFIREAIQRDNKAVSEAEKRKEK-MKKSGDRSVSVDP 220

The following BLAST results are available for this feature:

BLAST of Ggra5741.t1 vs. uniprot

BLAST of Ggra5741.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J3L7	4.480e-26	46.27	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IHB9	1.890e-18	37.50	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..288

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000897_pilon	contig	tig00000897_pilon:471931..472839 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5741.t1	Ggra5741.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000897_pilon 471931..472839 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MKTTDRPGHPTGALISARVVFNRLYQELLGRSQPYDDNFPIYAELSNAVK
DKIRRFLYERLKLQRGKLTFRAIRSQFYSQLFSLQRGLLDTFPLLCAAQK
EAAQRDKQAVAEATKRKKNCLDNDGLPDTQIGPRTAAVTTRQRADVAIAP
DTTKDTTSQALTERNNARNMGQGADGRHRNSGSETDGVDNAAPVHEGRSD
CEDSDESDEIDESDEEDASGTVHGRDENVCRQVTAMQSSGSRDVDDNEIT
PVKPLKTKGGRKVSKKFNKRQNEDGEDDGGGERDRQGTTKRKRNKRASLS
GT*