Ggra5741.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5741.t1
Unique NameGgra5741.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:471931..472839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5741Ggra5741Gracilaria gracilis GNS1m malegenetig00000897_pilon 471931..472839 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5741.t1.stop1Ggra5741.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000897_pilon 471931..471933 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5741.t1.CDS1Ggra5741.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000897_pilon 471931..472839 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5741.t1.exon1Ggra5741.t1.exon1Gracilaria gracilis GNS1m maleexontig00000897_pilon 471931..472839 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5741.t1.start1Ggra5741.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000897_pilon 472837..472839 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5741.t1Ggra5741.t1Gracilaria gracilis GNS1m malepolypeptidetig00000897_pilon 471931..472839 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=303bp
MKTTDRPGHPTGALISARVVFNRLYQELLGRSQPYDDNFPIYAELSNAVK
DKIRRFLYERLKLQRGKLTFRAIRSQFYSQLFSLQRGLLDTFPLLCAAQK
EAAQRDKQAVAEATKRKKNCLDNDGLPDTQIGPRTAAVTTRQRADVAIAP
DTTKDTTSQALTERNNARNMGQGADGRHRNSGSETDGVDNAAPVHEGRSD
CEDSDESDEIDESDEEDASGTVHGRDENVCRQVTAMQSSGSRDVDDNEIT
PVKPLKTKGGRKVSKKFNKRQNEDGEDDGGGERDRQGTTKRKRNKRASLS
GT*
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spliced messenger RNA

>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=909bp|location=Sequence derived from alignment at tig00000897_pilon:471931..472839- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGACTACGGATCGCCCGGGGCACCCGACCGGCGCATTGATATCTGC
TAGAGTTGTGTTCAATCGCCTCTACCAAGAGCTTCTGGGAAGGTCTCAGC
CGTACGATGACAACTTTCCGATCTATGCTGAGTTATCGAACGCGGTGAAA
GATAAGATTCGTCGGTTCTTGTACGAGCGCCTGAAACTGCAACGTGGGAA
GCTCACCTTTCGTGCTATTCGTTCTCAGTTTTACTCTCAGCTTTTTTCTT
TACAGCGTGGATTGTTAGATACGTTCCCTCTTCTATGCGCGGCCCAGAAG
GAAGCCGCGCAGCGTGACAAACAGGCCGTCGCGGAGGCGACAAAGCGCAA
GAAGAACTGTTTGGACAACGATGGCCTACCTGATACTCAGATTGGGCCCC
GAACAGCAGCTGTAACAACTCGACAGCGCGCCGATGTTGCTATTGCTCCC
GATACTACAAAAGATACAACCAGTCAAGCCCTTACTGAACGAAATAATGC
GAGGAATATGGGTCAGGGGGCTGATGGCAGACACAGGAACTCTGGGAGCG
AGACCGATGGGGTTGACAATGCTGCACCAGTTCACGAGGGCAGAAGCGAC
TGTGAGGATAGTGATGAGAGTGATGAGATTGATGAGAGTGATGAAGAGGA
TGCGAGTGGAACTGTTCATGGTCGTGATGAAAACGTCTGCAGACAGGTTA
CTGCGATGCAGAGTTCCGGAAGCAGGGATGTCGATGATAACGAGATCACT
CCGGTGAAGCCACTGAAGACAAAGGGAGGTAGAAAGGTCTCAAAGAAGTT
CAATAAGCGTCAGAACGAGGATGGTGAAGACGACGGTGGTGGAGAGCGAG
ACAGGCAAGGCACCACAAAGAGGAAGCGGAACAAACGGGCTTCTTTATCG
GGAACGTGA
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protein sequence of Ggra5741.t1

>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MKTTDRPGHPTGALISARVVFNRLYQELLGRSQPYDDNFPIYAELSNAVK
DKIRRFLYERLKLQRGKLTFRAIRSQFYSQLFSLQRGLLDTFPLLCAAQK
EAAQRDKQAVAEATKRKKNCLDNDGLPDTQIGPRTAAVTTRQRADVAIAP
DTTKDTTSQALTERNNARNMGQGADGRHRNSGSETDGVDNAAPVHEGRSD
CEDSDESDEIDESDEEDASGTVHGRDENVCRQVTAMQSSGSRDVDDNEIT
PVKPLKTKGGRKVSKKFNKRQNEDGEDDGGGERDRQGTTKRKRNKRASLS
GT*
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mRNA from alignment at tig00000897_pilon:471931..472839-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=909bp|location=Sequence derived from alignment at tig00000897_pilon:471931..472839- (Gracilaria gracilis GNS1m male)
ATGAAGACTACGGATCGCCCGGGGCACCCGACCGGCGCATTGATATCTGC
TAGAGTTGTGTTCAATCGCCTCTACCAAGAGCTTCTGGGAAGGTCTCAGC
CGTACGATGACAACTTTCCGATCTATGCTGAGTTATCGAACGCGGTGAAA
GATAAGATTCGTCGGTTCTTGTACGAGCGCCTGAAACTGCAACGTGGGAA
GCTCACCTTTCGTGCTATTCGTTCTCAGTTTTACTCTCAGCTTTTTTCTT
TACAGCGTGGATTGTTAGATACGTTCCCTCTTCTATGCGCGGCCCAGAAG
GAAGCCGCGCAGCGTGACAAACAGGCCGTCGCGGAGGCGACAAAGCGCAA
GAAGAACTGTTTGGACAACGATGGCCTACCTGATACTCAGATTGGGCCCC
GAACAGCAGCTGTAACAACTCGACAGCGCGCCGATGTTGCTATTGCTCCC
GATACTACAAAAGATACAACCAGTCAAGCCCTTACTGAACGAAATAATGC
GAGGAATATGGGTCAGGGGGCTGATGGCAGACACAGGAACTCTGGGAGCG
AGACCGATGGGGTTGACAATGCTGCACCAGTTCACGAGGGCAGAAGCGAC
TGTGAGGATAGTGATGAGAGTGATGAGATTGATGAGAGTGATGAAGAGGA
TGCGAGTGGAACTGTTCATGGTCGTGATGAAAACGTCTGCAGACAGGTTA
CTGCGATGCAGAGTTCCGGAAGCAGGGATGTCGATGATAACGAGATCACT
CCGGTGAAGCCACTGAAGACAAAGGGAGGTAGAAAGGTCTCAAAGAAGTT
CAATAAGCGTCAGAACGAGGATGGTGAAGACGACGGTGGTGGAGAGCGAG
ACAGGCAAGGCACCACAAAGAGGAAGCGGAACAAACGGGCTTCTTTATCG
GGAACGTGA
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Coding sequence (CDS) from alignment at tig00000897_pilon:471931..472839-

>Ggra5741.t1 ID=Ggra5741.t1|Name=Ggra5741.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=909bp|location=Sequence derived from alignment at tig00000897_pilon:471931..472839- (Gracilaria gracilis GNS1m male)
ATGAAGACTACGGATCGCCCGGGGCACCCGACCGGCGCATTGATATCTGC
TAGAGTTGTGTTCAATCGCCTCTACCAAGAGCTTCTGGGAAGGTCTCAGC
CGTACGATGACAACTTTCCGATCTATGCTGAGTTATCGAACGCGGTGAAA
GATAAGATTCGTCGGTTCTTGTACGAGCGCCTGAAACTGCAACGTGGGAA
GCTCACCTTTCGTGCTATTCGTTCTCAGTTTTACTCTCAGCTTTTTTCTT
TACAGCGTGGATTGTTAGATACGTTCCCTCTTCTATGCGCGGCCCAGAAG
GAAGCCGCGCAGCGTGACAAACAGGCCGTCGCGGAGGCGACAAAGCGCAA
GAAGAACTGTTTGGACAACGATGGCCTACCTGATACTCAGATTGGGCCCC
GAACAGCAGCTGTAACAACTCGACAGCGCGCCGATGTTGCTATTGCTCCC
GATACTACAAAAGATACAACCAGTCAAGCCCTTACTGAACGAAATAATGC
GAGGAATATGGGTCAGGGGGCTGATGGCAGACACAGGAACTCTGGGAGCG
AGACCGATGGGGTTGACAATGCTGCACCAGTTCACGAGGGCAGAAGCGAC
TGTGAGGATAGTGATGAGAGTGATGAGATTGATGAGAGTGATGAAGAGGA
TGCGAGTGGAACTGTTCATGGTCGTGATGAAAACGTCTGCAGACAGGTTA
CTGCGATGCAGAGTTCCGGAAGCAGGGATGTCGATGATAACGAGATCACT
CCGGTGAAGCCACTGAAGACAAAGGGAGGTAGAAAGGTCTCAAAGAAGTT
CAATAAGCGTCAGAACGAGGATGGTGAAGACGACGGTGGTGGAGAGCGAG
ACAGGCAAGGCACCACAAAGAGGAAGCGGAACAAACGGGCTTCTTTATCG
GGAACGTGA
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