Ggra5734.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5734.t1
Unique NameGgra5734.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A2V3J0Z2 (Sodium/calcium exchanger NCL2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z2_9FLOR)

HSP 1 Score: 164 bits (414), Expect = 2.600e-44
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0
Query:    1 MLLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATA 148
            MLL VY F+L+NAS+LIA G  LLL V +L+ +V SVVLPILGAVPDGA VLFSGL ENAQEELSVG  ALAGST MLLT+ WFLSILAGR++IRPD    Y    +L P ++M L RT +E Q MV+ AGR ML+TA +++V Q  A
Sbjct:   36 MLLCVYGFILYNASQLIAHGSELLLFVPALRDVVGSVVLPILGAVPDGAIVLFSGLGENAQEELSVGVGALAGSTIMLLTVPWFLSILAGRVSIRPDGQLTYQNHHKLSPPNSMSLLRTGVEPQVMVKDAGRVMLLTAGTYLVIQFAA 183          
BLAST of Ggra5734.t1 vs. uniprot
Match: R7QPX4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPX4_CHOCR)

HSP 1 Score: 150 bits (380), Expect = 2.290e-39
Identity = 93/165 (56.36%), Postives = 112/165 (67.88%), Query Frame = 0
Query:    2 LLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRP-ELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAFLAPNHGMGRENSSQER 165
            LL VY  VLF AS+LI +G  LLL+V SL+GIV SVVLPILGAVPDGA VLFSGL  +AQE L VG  ALAGST+MLLTI WFL+  AGR+NI  + V  Y  +P +LHP  NM LDRT ++   MV  +GR ML+TA S +V QA A    +     + +S  R
Sbjct:   64 LLCVYGVVLFKASQLITEGSELLLLVPSLRGIVGSVVLPILGAVPDGAIVLFSGLGPDAQETLQVGVGALAGSTAMLLTIPWFLTTFAGRVNI-VNGVATYHQKPHKLHPPGNMSLDRTGVQPLPMVGISGRIMLVTATSLLVIQAAAISTGSFFASDQTASATR 227          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A0W8DBN0 (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DBN0_PHYNI)

HSP 1 Score: 133 bits (334), Expect = 8.170e-36
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0
Query:    4 SVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRPE-------LHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATA 148
            +VY FVLFNAS LI+DG  LLL+V S+ GIV SVVLP+LGAVPDGA VLFSG+  NAQE++SVG  ALAGST MLLTI W LS+ AGR+NI  +   +Y  RP+       L P  N  L +T +     + +  RTM++T++ +++ Q  A
Sbjct:   26 AVYGFVLFNASNLISDGSELLLLVPSMAGIVGSVVLPVLGAVPDGAIVLFSGMGPNAQEQVSVGVGALAGSTIMLLTIPWALSVYAGRVNIDENGRGNYV-RPKGDQHWAKLMPPGNRNLTKTGVVLFDEIPSTARTMILTSLIYLILQVPA 176          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A7S3XTG0 (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG0_HETAK)

HSP 1 Score: 136 bits (343), Expect = 3.600e-35
Identity = 78/147 (53.06%), Postives = 101/147 (68.71%), Query Frame = 0
Query:    2 LLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATA 148
            LL VY ++L   S  I+DG  LLL+V SL GIV SV+LPILGAVPDGA VLFSG+  +AQE+LSVG  ALAGST MLLT+ WFLS+LAGR++I  D+   Y  +P+L P     L RT ++    +   G  M+IT++S++V Q  A
Sbjct:   11 LLCVYGYILCVGSGYISDGSELLLLVPSLAGIVGSVILPILGAVPDGAIVLFSGMGPDAQEQLSVGVGALAGSTIMLLTLPWFLSVLAGRVSIDKDNKLTYTSKPKLVPGEENSLTRTGVDCAPEISKGGALMMITSMSYLVIQLPA 157          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A0L0DBP1 (Ca2:Cation Antiporter family n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DBP1_THETB)

HSP 1 Score: 137 bits (345), Expect = 2.220e-34
Identity = 80/150 (53.33%), Postives = 106/150 (70.67%), Query Frame = 0
Query:    2 LLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRP--ELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAF 149
            L++VY +VLF +S +I+DG  LLL+V SL GIV SVVLPILGAVPDGA VLFSGL  +AQ++LSVG  ALAGST MLLTI WFLSILAGR+++  +    Y      +L P  +M L RT +     +  AG+ M+IT++++++ Q  AF
Sbjct:   95 LMAVYGYVLFTSSNMISDGSELLLLVPSLAGIVGSVVLPILGAVPDGAIVLFSGLGPDAQKQLSVGVGALAGSTIMLLTIPWFLSILAGRVSLDRNGKGAYKAPAGAKLSPPGSMSLTRTGVNCGPSIAIAGKIMVITSLAYIIIQGPAF 244          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A0G4GBW8 (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GBW8_VITBC)

HSP 1 Score: 135 bits (340), Expect = 9.250e-34
Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    4 SVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNI---------RPDDVPHYFGRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAFLAPNHGMGRENSSQERF 166
            + Y ++LFNAS LI++G  LLL+V SL G+V SVVLP+LGAVPDGA VLFSGL  +AQE+LSVG  ALAGST MLLTI WFLSI+ GR+N+         +P D    + +  L P +N  L +T ++    +   G+ ML+TA++++V Q  AF A  H    +  S ER+
Sbjct:   30 ACYGYILFNASNLISEGSELLLLVPSLAGLVGSVVLPVLGAVPDGAIVLFSGLGPDAQEQLSVGVGALAGSTIMLLTIPWFLSIVGGRVNVLESGELTYKKPKDADPDWKK--LDPPNNWSLTQTGVKCNKSIAVNGKIMLLTAITYLVIQIPAF-AVIHDTIEQKRSFERW 198          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A7S0ZIS2 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIS2_9RHOD)

HSP 1 Score: 135 bits (339), Expect = 1.380e-33
Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 0
Query:    2 LLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYFGRP------ELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAFLAPNH 154
            LL VY +VL+ AS +I+DG  LLL+V SL+ IV SVVLPILGAVPD A +LFS + ENAQEE+SVG  ALAGST MLLT+ WFLS++ GR++I P+   +Y   P      +L     + L R  +E    V  AG  ML+T++S+ + Q  AF + N+
Sbjct:   47 LLLVYGYVLYTASNMISDGSELLLLVPSLRNIVGSVVLPILGAVPDSAIILFSAMGENAQEEVSVGVGALAGSTIMLLTVPWFLSVVGGRVSILPNGQTNYKRVPGDPGWTKLFAQDRLSLTRAGVEALPSVSHAGFLMLLTSLSYFIIQLPAFASGNY 205          
BLAST of Ggra5734.t1 vs. uniprot
Match: F0W2B1 (Ca2: Cation Antiporter (CaCA) Family putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2B1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.440e-33
Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = 0
Query:    4 SVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNI---------RPDDVPHYFGRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAF 149
            +VY FVLFNAS +I++G  LLL+V SL GIV S+VLP+LGAVPDG  VLFSG+  NAQE+LSVG  ALAGST MLLTI W +S+ AGR+N+         RP + P  +G+  L+P SN  + +T +     +Q   +TM+ T++ ++V Q  AF
Sbjct:   26 AVYGFVLFNASNMISNGSELLLLVPSLAGIVGSIVLPVLGAVPDGMIVLFSGMGPNAQEQLSVGVGALAGSTIMLLTIPWAISVYAGRVNLDEHGRGRYKRPKNAPEDWGK--LNPPSNKNIWKTGVVLLDEIQMNAKTMIFTSLIYLVLQIPAF 178          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A0G4FV97 (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FV97_9ALVE)

HSP 1 Score: 134 bits (338), Expect = 1.570e-33
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 0
Query:    5 VYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDV----PHYFGRP--ELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAF 149
            VY ++LFNAS +I+DG  LLL+V SL G+V SVVLPILGAVPDGA VLFSGL  NAQEEL VG  ALAGST ML TI WFLSI+ GR+N          P   G    +L P SN  L  T +E +  +    + +++TA+S+ + Q  AF
Sbjct:   30 VYGYILFNASNMISDGSELLLLVPSLAGLVGSVVLPILGAVPDGAIVLFSGLGPNAQEELKVGVGALAGSTIMLFTIPWFLSIMGGRVNYEDGKCTYTKPRVAGEEWSKLMPESNFSLTGTAVECESSIAVNAKLVMLTALSYFIIQLPAF 180          
BLAST of Ggra5734.t1 vs. uniprot
Match: A0A7S1C6T8 (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6T8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 8.470e-33
Identity = 80/153 (52.29%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    2 LLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGANVLFSGL--VENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVPHYF---GRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAF 149
            L   Y F+LF +S LI++G  LLL+V SL GIV SVVLP+LGAVPDGA VLFSGL   E AQE+LSVG  ALAGST MLLT+ W LSI AGR+N+      +Y    G  +L P  NM +  T +     +   G+ ML T++++VV QA AF
Sbjct:   39 LFVAYGFILFKSSNLISEGSELLLLVPSLAGIVGSVVLPVLGAVPDGAIVLFSGLGSFEEAQEQLSVGVGALAGSTIMLLTLPWALSIFAGRVNLDARGNGNYRPAKGHSKLEPEGNMAMSTTGVNVTPAIAVGGKIMLGTSIAYVVIQAPAF 191          
The following BLAST results are available for this feature:
BLAST of Ggra5734.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0Z22.600e-4463.51Sodium/calcium exchanger NCL2 n=1 Tax=Gracilariops... [more]
R7QPX42.290e-3956.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0W8DBN08.170e-3651.97Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A7S3XTG03.600e-3553.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0L0DBP12.220e-3453.33Ca2:Cation Antiporter family n=1 Tax=Thecamonas tr... [more]
A0A0G4GBW89.250e-3448.26Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S0ZIS21.380e-3349.69Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
F0W2B11.440e-3350.32Ca2: Cation Antiporter (CaCA) Family putative n=1 ... [more]
A0A0G4FV971.570e-3352.32Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1C6T88.470e-3352.29Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004713Calcium/proton exchangerPANTHERPTHR31503VACUOLAR CALCIUM ION TRANSPORTERcoord: 1..155
NoneNo IPR availablePANTHERPTHR31503:SF36SODIUM/CALCIUM EXCHANGER NCLcoord: 1..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:306921..307484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5734.t1Ggra5734.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 306921..307484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5734.t1 ID=Ggra5734.t1|Name=Ggra5734.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MLLSVYRFVLFNASKLIADGGGLLLMVQSLKGIVSSVVLPILGAVPDGAN
VLFSGLVENAQEELSVGFEALAGSTSMLLTISWFLSILAGRMNIRPDDVP
HYFGRPELHPSSNMRLDRTEIETQGMVQTAGRTMLITAVSHVVTQATAFL
APNHGMGRENSSQERFITGVPLCYRILVPVCILVDLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004713CaH_exchang