Ggra5725.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5725.t1
Unique Name	Ggra5725.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	231

Homology

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BLAST of Ggra5725.t1 vs. uniprot
Match: A0A2V3IP55 (Unconventional prefoldin RPB5 interactor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP55_9FLOR)

HSP 1 Score: 141 bits (356), Expect = 1.150e-35
Identity = 93/236 (39.41%), Postives = 128/236 (54.24%), Query Frame = 0

Query:   23 KVMDKMGSAVEKAQQQVLDDEIVSITEVYEGDEDTASRLELPRGSEPDKNVDFGDDSEEFLDMTGGDNGAEEEYVSCEDYLDALAE------------------------------GLAKGFFGAAPKKHARAETKYVPKAVTNGGEVPGTQVAKQPTASAVAVVVEKKPSRKSKGRNRRPRSSASAFPPYKLMELLAHDAPDKTQLKVLNDADADDAESQMXXXLRLRGAGKDAV 228
            K+++ +  AV +AQQQ ++D IV+ TEVYEGDEDT SR+ELP G EPD+NV F DDS+E+LD+TG +   E E  S E+Y +AL +                              G +KGFFGAAPKK   A+T+          E P TQ+ +   + AV   VE+KPSRKS+ RNRRPR+S  A P      LL  +   +  +++L D  A++ +       RLR   +DA 
Sbjct:  297 KMVNALQRAVVEAQQQAMEDGIVNFTEVYEGDEDTPSRVELPAGFEPDENVSFADDSQEYLDVTGVNGNNETEQFSREEYFEALIQAERDAQIEEEQAKVQKQTTELEREKKEFGKGFSKGFFGAAPKKPEPAKTEQSNVGEPLQAETPSTQITESAASEAV---VERKPSRKSRRRNRRPRTSTGASPSPMSTALLKQEEQARMDIELLGDEAAENNDEPTSMFRRLRNLQRDAT 529

The following BLAST results are available for this feature:

BLAST of Ggra5725.t1 vs. uniprot

BLAST of Ggra5725.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IP55	1.150e-35	39.41	Unconventional prefoldin RPB5 interactor n=1 Tax=G...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000897_pilon	contig	tig00000897_pilon:133275..134057 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5725.t1	Ggra5725.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000897_pilon 133275..134057 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5725.t1 ID=Ggra5725.t1|Name=Ggra5725.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=231bp
MRASVQNYKSGNAPNTGGQSKAKVMDKMGSAVEKAQQQVLDDEIVSITEV
YEGDEDTASRLELPRGSEPDKNVDFGDDSEEFLDMTGGDNGAEEEYVSCE
DYLDALAEGLAKGFFGAAPKKHARAETKYVPKAVTNGGEVPGTQVAKQPT
ASAVAVVVEKKPSRKSKGRNRRPRSSASAFPPYKLMELLAHDAPDKTQLK
VLNDADADDAESQMSMSLRLRGAGKDAVRS*