Ggra5698.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5698.t1
Unique NameGgra5698.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Homology
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A2V3IVF9 (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF9_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 9.570e-119
Identity = 164/198 (82.83%), Postives = 179/198 (90.40%), Query Frame = 0
Query:    1 MATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVPFRIGAIPKQLPEYIRRPGVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGTRLIWEGVKRPEFRWVEQQLSTKRTEDLVER 198
            MATAALNELLDANR+FTR+++RSLVPKYDAKDL VLFPDVGEARLA  VYGDVPF IG IPKQ PE+++R GVAVIVNPGFNISEWINIQNLVS+DSKCTLVTVNADFDKVRG YYPRLFYPGL+KA++KVL RFEE+YYIKSFSNGGTLLRR+PE WKLFYA + GT LIWEG +RPEFRWVEQQL  KR EDL  R
Sbjct:   22 MATAALNELLDANRAFTRDLMRSLVPKYDAKDLRVLFPDVGEARLARDVYGDVPFGIGVIPKQQPEFVQRAGVAVIVNPGFNISEWINIQNLVSEDSKCTLVTVNADFDKVRGGYYPRLFYPGLHKARDKVLKRFEEIYYIKSFSNGGTLLRRFPEGWKLFYADKDGTTLIWEGEERPEFRWVEQQLGRKRMEDLAGR 219          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A7S0G1A8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1A8_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 1.450e-42
Identity = 83/193 (43.01%), Postives = 119/193 (61.66%), Query Frame = 0
Query:    2 ATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVY----GDVPFRIGAIPKQLPEYIRRPGVAV--IVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGT-RLIWEGVKRPEFRWVEQQL 187
            A+AALNE +DANR   RE++R    +Y  + L V FPD GEA LA + +    G+  F I  I +  P   R P   +  ++NPGFNI E+IN++N   DD K T+V +N + D++RG YYPR+FYP L+K  E+ L +F  +Y+ KS+ N GTLLR YP  W+LFY    G  + + E  +RP ++ +E+ L
Sbjct:   15 ASAALNETMDANRRHARELIRGFTMEYSGR-LSVAFPDKGEAVLAQRSWKVDEGEERFYISTI-EAAP---RDPNAELFFVLNPGFNIDEYINLENF--DDEKRTIVVINGELDRIRGGYYPRIFYPKLHKVAERSLRKFVSIYFFKSYPNRGTLLRAYPGPWRLFYTSAQGEIKCLIESEERPSYQEMERIL 200          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A5J4Z109 (Protein LOW PSII ACCUMULATION 3, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z109_PORPP)

HSP 1 Score: 148 bits (373), Expect = 2.440e-40
Identity = 77/203 (37.93%), Postives = 119/203 (58.62%), Query Frame = 0
Query:    1 MATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGD---VPFRIGAIPKQLPEYIRRPGVA-------VIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNG-GTLLRRYPEDWKLFYAGRSGT--RLIWEGVKRPEFRWVEQQLSTK 190
            MAT+ALN++ DANR   R +  +L    DA  + ++FPD  EA LA KV+G+   +PF +G++         R   A       V+VNPGFNI EW+ +++L        ++ +N   D+VR  YYPRLFYP L++ K++ L +FE V++ K F +G GTL R++P DW+  +  + G   RL+ +  +RPE++ VEQ    +
Sbjct:   94 MATSALNQIADANREHARALATALAADKDAGTVCLVFPDAKEAALATKVFGESTVLPFEVGSLAAAATMQAEREQPAGSTRTLFVVVNPGFNIEEWLQLESLHLGHPSDPILVINGGMDRVRSGYYPRLFYPKLHQTKDRFLCKFEPVFFYKPFGSGLGTLYRKFPADWQTLFHVKDGGGYRLLSQDAQRPEYKVVEQNFRAE 296          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A836CP02 (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP02_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.810e-39
Identity = 79/195 (40.51%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    5 ALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVY-----GDVPFRIGAIPKQLPEYIRRPG---VAVIVNPGFNISEWINIQNLVSDDSKC----------TLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGTRLIWE-GVKRPEF 180
            +L E LDANR F RE++R+   K   K L  +F D GEA+LAAK +     G +PFR+ +I + L +     G   + ++V PGFNI EWI +  L +  +K           ++V +N   DKVRG YYP+L YPGL+ AK++ +  FE VYY+K+   G  L RRYPEDW++ YA R    ++ +    RPE+
Sbjct:    8 SLGETLDANRGFARELMRAFSAKM-GKALWAVFADPGEAKLAAKAFTGGASGSLPFRVTSIKEALGKRAAADGGCDLQLVVQPGFNIDEWIQLDTLYAAGAKARQAAGAAGQPSMVVLNGSLDKVRGGYYPKLVYPGLHAAKDRFIKNFEPVYYLKALPEGW-LFRRYPEDWQVIYAERGSDPVVLQTSSTRPEY 200          
BLAST of Ggra5698.t1 vs. uniprot
Match: M1VKG6 (DUF1995 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VKG6_CYAM1)

HSP 1 Score: 132 bits (331), Expect = 1.070e-34
Identity = 72/193 (37.31%), Postives = 115/193 (59.59%), Query Frame = 0
Query:    3 TAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYG--DVPFRIGAIPK-QLPEYIRR---PGVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSG--TRLIWEGVKRPEFRWVEQQL 187
            TAAL+ +LDAN S  RE+++     +  K LH++FPDV EA++A KVYG  +  F + A+P  + P ++++   P +  +V PGFNI EW+ ++         ++V +N + D++R +YYP LFYP L   +++ L +FE +YY+K   NG  L R +PE W+ F+    G  TR+  +  +RP F    Q+L
Sbjct:   50 TAALSRILDANTSHAREIIKPFAASF-RKRLHLVFPDVAEAKIAEKVYGSSEHTFTLSALPLYERPAFLQQVEAPALVFVVQPGFNIDEWLQLERPALLYPDASIVVLNGNMDRLRSNYYPPLFYPRLTALRKRYLEQFEPIYYLKPLPNG-LLFRVFPEPWQTFFCASPGEATRIAVDD-ERPTFPQTTQRL 239          
BLAST of Ggra5698.t1 vs. uniprot
Match: M2Y6Q8 (DUF1995 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6Q8_GALSU)

HSP 1 Score: 126 bits (317), Expect = 2.450e-32
Identity = 70/197 (35.53%), Postives = 110/197 (55.84%), Query Frame = 0
Query:    1 MATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVPFR------IGAIPKQLPEYIRRPGVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGTRLIWEGVKRPEFRWVEQQLSTKR 191
            + +AALN+++DANR+F + +V+            V+FPD  E++LA +   D  FR      I ++ + +   ++   + VI+NPGF + EW  ++   +   +  ++  NAD DK+RG YYPR  YP LY  K+K L +FE VYY++ F NG  L+RRYP  W++ Y        I E  +RP+F+ V   L+  R
Sbjct:   84 IGSAALNQVMDANRTFAKSVVQRFPHVSGNGTTFVVFPDDAESKLARE---DRDFRTLDSVFITSLQRDID--LQDASLVVILNPGFQVQEWFEVERFCN--YQVPVILFNADLDKLRGGYYPRFLYPKLYATKDKCLTKFEPVYYVRFFVNGA-LIRRYPNPWQIVYEEEGCLYCILERNERPDFQTVRNSLNQFR 272          
BLAST of Ggra5698.t1 vs. uniprot
Match: W7TLD5 (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLD5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.580e-32
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    5 ALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVPFRIGAIPKQLPEYIRRP-GVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWK---LFYAGRSGT 168
            +L E LD +R +TRE VR   PK     L V+FPD  EA LA K +G V FRI  I   +      P  + + V PGFN+ E+IN++ +        ++ VN + D++RG YYPR+FYPGLY  KE++L  FE VYY+K  + GG + R++PE+W+    +Y  + GT
Sbjct:  104 SLGEFLDDSREWTREFVRPFTPK--GAKLWVIFPDGKEATLAGKRWGGVNFRIMGIDTAMKASKDEPCELQIAVTPGFNVQEYINLEKVRRPG--VPMIVVNGNLDRIRGGYYPRIFYPGLYNVKERMLQYFEPVYYLKP-AQGGFIFRKFPEEWQQVLAYYDLQPGT 266          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A7S1EPF0 (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPF0_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 3.200e-32
Identity = 69/190 (36.32%), Postives = 114/190 (60.00%), Query Frame = 0
Query:    1 MATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVP--FRIGAIPKQLPEYIRRPGVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNG-GTLLRRYPEDWKLFYAGRSGT-RLIWEGVKRPEFRWVEQQ 186
            +ATAALN+LLDANR+    + ++L  +   +   V FPD GE +LA   + +     +I +I   L     +    ++V PGFN+ EW++++ L        ++ +N + D+VRG YYPR+FYPGL++ K++ LN+FE ++++K F +G G L R+YPE W+  +    G+ RLI     RP ++ VE++
Sbjct:  121 IATAALNQLLDANRNHALVLSKALEKRGSVR---VAFPDAGETKLAKNAWKNESDNIKISSIKAGLDSDSGKS--ILVVMPGFNVDEWLDMEKLRIGPP---IIVLNGEMDRVRGGYYPRIFYPGLHRVKDRFLNKFEPIFFLKQFGSGLGVLFRKYPEPWQTLFRDSDGSLRLIAVDQTRPAYQDVEKR 302          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A6H5JFY8 (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFY8_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 3.700e-31
Identity = 70/166 (42.17%), Postives = 99/166 (59.64%), Query Frame = 0
Query:    5 ALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVPFRIGAIPKQLPEYIRRP-GVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGTR 169
            +L E LDANRSF RE+ RS   +   K L +       A LA   YG   FR+  I   + +       + ++VNPGF+++EWI + +LV  D    +V +N + DK+RG YYPR+F+PGLY AKE+ L +FE VYY+K+   GG + RR PEDW++  A +S  R
Sbjct:  184 SLGETLDANRSFARELARSFSARM-GKALWL-------AELAQNTYGGTTFRVVGINSAIKDLKDEECQMQIVVNPGFDVNEWIVLDSLVRPD--VPMVMLNGNLDKLRGGYYPRIFFPGLYNAKERFLKKFETVYYLKALP-GGWIFRRAPEDWQVVSAAQSEKR 338          
BLAST of Ggra5698.t1 vs. uniprot
Match: A0A7J7INM7 (DUF1995 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INM7_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 2.400e-29
Identity = 71/194 (36.60%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    4 AALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVYGDVPF--RIGAIPK-----QLPEYIRRPGVAVIVNPGFNISEWINIQNLVSDDSKCTLVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTLLRRYPEDWKLFYAGRSGT-RLIWEGVKRPEFRWVEQQLST 189
            AAL+ LLDAN    +E+++  V     K LHV+FPD+ EA+ A + YG   F   + A+P       L E I  P + ++V PGFN+ EW+ ++         T+V +N   D++R +YYP +FYP L   +++ L  FE +YY+K   NG  L R +PE W+   +G  G    I     RP F  VE++L T
Sbjct:  192 AALSRLLDANALHAQEIIKPFVVAL-RKRLHVVFPDIAEAKQAQRTYGTREFLYTLTALPMYRKHAHLTE-IEPPDLILVVQPGFNVEEWLQLERPSQLYPDATIVVLNGTMDRLRSNYYPPIFYPRLTALRKRYLEHFEPIYYLKPLRNG-MLFRVFPEPWQTLQSGPDGEFTCIAVDNARPSFAQVEERLGT 382          
The following BLAST results are available for this feature:
BLAST of Ggra5698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVF99.570e-11982.83DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
A0A7S0G1A81.450e-4243.01Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z1092.440e-4037.93Protein LOW PSII ACCUMULATION 3, chloroplastic n=1... [more]
A0A836CP026.810e-3940.51DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
M1VKG61.070e-3437.31DUF1995 domain-containing protein n=1 Tax=Cyanidio... [more]
M2Y6Q82.450e-3235.53DUF1995 domain-containing protein n=1 Tax=Galdieri... [more]
W7TLD52.580e-3241.67DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S1EPF03.200e-3236.32Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A6H5JFY83.700e-3142.17DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7J7INM72.400e-2936.60DUF1995 domain-containing protein n=1 Tax=Cyanidio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 11..183
e-value: 9.4E-22
score: 78.0
IPR044687Protein LOW PSII ACCUMULATION 3PANTHERPTHR34051PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTICcoord: 74..162
NoneNo IPR availablePANTHERPTHR34051:SF1PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC ISOFORM X1coord: 74..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1388742..1389338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5698.t1Ggra5698.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1388742..1389338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5698.t1 ID=Ggra5698.t1|Name=Ggra5698.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MATAALNELLDANRSFTREMVRSLVPKYDAKDLHVLFPDVGEARLAAKVY
GDVPFRIGAIPKQLPEYIRRPGVAVIVNPGFNISEWINIQNLVSDDSKCT
LVTVNADFDKVRGSYYPRLFYPGLYKAKEKVLNRFEEVYYIKSFSNGGTL
LRRYPEDWKLFYAGRSGTRLIWEGVKRPEFRWVEQQLSTKRTEDLVER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995
IPR044687LPA3