Ggra5673.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5673.t1
Unique NameGgra5673.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Homology
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A2V3IX82 (AMMECR1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX82_9FLOR)

HSP 1 Score: 342 bits (876), Expect = 1.130e-117
Identity = 163/204 (79.90%), Postives = 180/204 (88.24%), Query Frame = 0
Query:    1 MTPSLVHEASSRTEATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGYSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEMIE 204
            M PSL+ +  SRT+ATVQMCAKAFETI   LRP L  PPD DLP+S+GGVFVTWSV RGRDSHYSLRGCIGTL+PAP+HIAVPRYA QAAFHDSRFDPIS +E+SKLKVGVSVLSQFE A+ V+DW  GVHGIVL L GGYSATYLPEVCA+HGWTK+FCVRSLAEKAGFRG VD+SVLNSAT+TRYQSSK EL F DYM++IE
Sbjct:    1 MAPSLIDDVVSRTDATVQMCAKAFETITATLRPGLPSPPDIDLPNSKGGVFVTWSVLRGRDSHYSLRGCIGTLTPAPVHIAVPRYAAQAAFHDSRFDPISASEVSKLKVGVSVLSQFEAAEHVYDWVVGVHGIVLSLAGGYSATYLPEVCAEHGWTKEFCVRSLAEKAGFRGAVDQSVLNSATITRYQSSKIELTFSDYMKLIE 204          
BLAST of Ggra5673.t1 vs. uniprot
Match: R7Q557 (AMMECR1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q557_CHOCR)

HSP 1 Score: 242 bits (617), Expect = 1.850e-78
Identity = 119/187 (63.64%), Postives = 142/187 (75.94%), Query Frame = 0
Query:   19 MCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGG-YSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEMIE 204
            MCAKAF TI   LRP L  P   D+P+S+GG+FVTWS PRG   +YSLRGCIGTLS A L  AV RYA  AAF DSRFDPI+ +E+ +LKVGVSVLS FE A  V+DW  G HGI+L L GG YSATYLPEVCA+  W+K+ C+RSLAEKAG R  +D++VL +A +TRYQS+K EL F +YME+IE
Sbjct:    1 MCAKAFHTICKVLRPRLPAPQSLDIPTSKGGLFVTWSAPRGSRRNYSLRGCIGTLSRANLDDAVERYASYAAFRDSRFDPIAASEIDELKVGVSVLSGFEKASHVYDWDIGTHGIILELAGGRYSATYLPEVCAEQNWSKETCIRSLAEKAGHRRPMDDAVLEAAVLTRYQSTKAELLFAEYMELIE 187          
BLAST of Ggra5673.t1 vs. uniprot
Match: M2W5A9 (AMMECR1 family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5A9_GALSU)

HSP 1 Score: 158 bits (400), Expect = 4.330e-45
Identity = 78/188 (41.49%), Postives = 111/188 (59.04%), Query Frame = 0
Query:   17 VQMCAKAFETIATQLRPDLSPPPDFDLPS-SQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVL-YLPGG--YSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYM 200
            + +C  AF+ + ++LR    P     +P   +  +FVTW+          LRGCIGTL+P  L  A+  Y + +AF D RF PI   EL  L V VS+L  F    DV+DW  GVHG+++ +L  G  YSATYLPEVC + GWTK+ C+ SL  K+G+R  + ES+L +  +TRY S K  L++ +Y+
Sbjct:   39 LDLCLFAFDLLISRLRHVSEPTCPASVPDIDEYALFVTWNKTNREGERTQLRGCIGTLTPLNLRRAIHTYTLASAFRDRRFPPICYEELESLSVSVSILHNFLTGSDVYDWQVGVHGVIIDFLDKGSAYSATYLPEVCLEQGWTKEQCISSLIRKSGYRNTISESLLKTIRLTRYSSKKYSLSYSEYL 226          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A016VVC3 (AMMECR1 domain-containing protein n=9 Tax=Strongylida TaxID=6308 RepID=A0A016VVC3_9BILA)

HSP 1 Score: 155 bits (392), Expect = 2.570e-44
Identity = 81/189 (42.86%), Postives = 109/189 (57.67%), Query Frame = 0
Query:   15 ATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGY---SATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYM 200
            A+V M    F+ IA  +     PP    +P+ +  +FVTW     + SH  LRGCIGT S   LH  +  YA+ +AFHDSRFDP+   E+  L  GVS+L +FE A D  DWT G+HGI ++   G     A YLPEV  + GW     + +L EK G+RG +DE    S  VTR+QSSK  +++D+YM
Sbjct:    6 ASVDMAVFCFDVIAAAVNNHSDPPVPPSIPNDKFPLFVTWK----KGSHRRLRGCIGTFSQLHLHTGLRDYAITSAFHDSRFDPVRKEEIPHLHCGVSLLIKFESAHDYMDWTIGMHGIRIHFMDGSIRRDAVYLPEVAYEQGWDHLETINNLIEKGGYRGRIDEGFRLSLQVTRFQSSKVMISYDEYM 190          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A1Y2B7T5 (AMMECR1 domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2B7T5_9FUNG)

HSP 1 Score: 150 bits (380), Expect = 1.430e-42
Identity = 83/191 (43.46%), Postives = 107/191 (56.02%), Query Frame = 0
Query:   20 CAKAFETIATQLRPDLSPPPDFD---LPSSQGG--VFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGYSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEMIEG 205
            C   F T+ T L   L+P P      +   QG   +FVTW +        +LRGCIGT SP PL   +  YA  AAF D RF PI+ +E+ +L+VGVS+L  FEPA    DW  G HGI +    G +ATYLPEV  + GWT    + SL  K GFRG + E V     VTRY+S K E+++++Y   IEG
Sbjct:    7 CHLCFTTLLTDLSHPLTPSPSTKSNLISEIQGTFPLFVTWKLSS------NLRGCIGTFSPQPLSTGLQTYARAAAFQDRRFSPITASEVPQLRVGVSLLVDFEPAAGYTDWIIGTHGIWIEFGDGVTATYLPEVAGEQGWTHVEALDSLLRKGGFRGRITEDVRRGVKVTRYRSVKKEVSWEEYRAYIEG 191          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A1X6NLF3 (AMMECR1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLF3_PORUM)

HSP 1 Score: 152 bits (385), Expect = 1.600e-42
Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = 0
Query:   11 SRTEATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQG-GVFVTWS------VPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGG---YSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDY 199
            S T ++  MC  AF+ +   LR +  PP   ++P     G+FVTW+              Y LRGCIGTL+P+ LH ++  YAV +A  D RF  ++ AE+S L V VSVLS FE A DV+DWT GVHGI++    G   Y ATYLPEV  D GW K   + S   KAG+ G  D+       + RYQS+K  L +  Y
Sbjct:   41 SMTSSSRPMCIFAFDALLASLRSEAPPPMPTNVPDVDDVGLFVTWNKRSTGXXXXXXSDGYRLRGCIGTLTPSSLHSSLATYAVMSAVGDRRFPAVTRAEVSSLSVSVSVLSAFEEAADVYDWTVGVHGIIVSFEAGNRSYRATYLPEVMGDMGWDKGDALASAVRKAGWSGRTDDRFWGRVRLRRYQSTKVSLPYGVY 239          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A383VW61 (AMMECR1 domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VW61_TETOB)

HSP 1 Score: 150 bits (379), Expect = 8.020e-42
Identity = 84/203 (41.38%), Postives = 114/203 (56.16%), Query Frame = 0
Query:    8 EASSRTEATVQM------CAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVL-----YLPGGYSATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDY 199
            +AS+ TE   QM      C+  F+ + + L    SP PDF        +FVTW+       +  LRGCIGTL P  LH AV  YA+ +A  DSRF P+ + E+S+L   VS+L  FE A    DW  G HG+++      L    +AT+LPEV  D GW+K  C+ +L  KAG++G   + +L+S  VTRYQSSK  L+F DY
Sbjct:    5 KASTSTEEVTQMQASQDHCSFCFDVLISHLTKVDSPAPDFA--DGYQPLFVTWNKSSNWGQNTQLRGCIGTLEPRRLHTAVKDYALTSALRDSRFSPVQLKEVSQLSCSVSLLRCFEEAASWQDWEIGQHGLIIDFTDPVLSCKRTATFLPEVAGDQGWSKQQCIEALIRKAGYQGKPSQELLDSLHVTRYQSSKAALSFADY 205          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A8H7PYH8 (AMMECR1 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PYH8_9FUNG)

HSP 1 Score: 149 bits (376), Expect = 8.650e-42
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 0
Query:   16 TVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGY----SATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEMIE 204
            TV+ C   F+ +A       S PP+FD   ++  +FVTW++   +   Y LRGCIG     PLH  + +YA+ +A HD RF+PIS  EL  L  GVS+L+ FE AK+  DW  G HGI +          +ATYLP+V  + GW K   + SL  K GF+G +  SV +S  + RYQSSK E+ +D+Y   +E
Sbjct:    4 TVKHCIYCFDVLAAHFEGRESIPPEFD--DNEYPLFVTWNI--RKHGSYRLRGCIGNFDAMPLHSGLKQYALTSALHDRRFNPISRKELPLLSCGVSLLTDFEKAKNYLDWDVGTHGIWIEFEDDSGRRRTATYLPDVIPEQGWDKIEAIDSLLRKGGFQGRITSSVRDSIRLKRYQSSKLEVTYDEYATYLE 192          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A397TU60 (AMMECR1 domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TU60_9GLOM)

HSP 1 Score: 148 bits (374), Expect = 2.180e-41
Identity = 78/194 (40.21%), Postives = 111/194 (57.22%), Query Frame = 0
Query:   15 ATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTW-SVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGYS----ATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEMI 203
            A ++ C   F+ +           P+F+  + Q  +FVTW SV +G+     LRGCIG     PLH  +  YA+ +A HD RF PI+  ELS L  GVS+L+ FE A+D  DW  GVHGI +     Y+    ATYLPEV  + GWTK+  + SL  K+G+ G + + + N   +TRYQS+K  + +D+Y+E I
Sbjct:    3 AAIEHCVFCFDILVAHFEGREHLEPEFE--NEQYPLFVTWNSVHQGQTR---LRGCIGNFDALPLHTGLKEYAITSAIHDRRFSPITARELSHLTCGVSLLTNFEDAEDYLDWEIGVHGIWIEFVDDYNRRRTATYLPEVAEEQGWTKEETIDSLLRKSGYNGRITDRIRNRVALTRYQSAKYVITYDEYIEHI 191          
BLAST of Ggra5673.t1 vs. uniprot
Match: A0A8J4PMX3 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PMX3_9MYCE)

HSP 1 Score: 147 bits (370), Expect = 5.990e-41
Identity = 79/195 (40.51%), Postives = 111/195 (56.92%), Query Frame = 0
Query:   11 SRTEATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGVFVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPISVAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGYS---ATYLPEVCADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYMEM 202
            +R +AT +M    F+++           P F   S    +FVTW +         LRGCIGT SP PL   + ++A+ +A  DSRF PIS  EL KL   VS+L +FE A+D +DW  G HGI +     ++   ATYLPEV  + GWTK+  ++SL  KAG++G VD S+ +   +TRYQSSK  L+F +Y  +
Sbjct:    6 ARVKATSEMVQYCFDSLVCHFENKELYVPTFTNDSFP--LFVTWKIDSNSSEEPELRGCIGTFSPRPLIEGLNKFALTSALKDSRFKPISSKELPKLHCSVSLLVEFEDAQDCWDWDIGTHGIWIEFNDSHTTRNATYLPEVMPEQGWTKEETMKSLVRKAGYQGKVDSSLYSKIKLTRYQSSKYSLSFQEYKNL 198          
The following BLAST results are available for this feature:
BLAST of Ggra5673.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX821.130e-11779.90AMMECR1 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q5571.850e-7863.64AMMECR1 domain-containing protein n=1 Tax=Chondrus... [more]
M2W5A94.330e-4541.49AMMECR1 family n=1 Tax=Galdieria sulphuraria TaxID... [more]
A0A016VVC32.570e-4442.86AMMECR1 domain-containing protein n=9 Tax=Strongyl... [more]
A0A1Y2B7T51.430e-4243.46AMMECR1 domain-containing protein n=1 Tax=Rhizoclo... [more]
A0A1X6NLF31.600e-4242.21AMMECR1 domain-containing protein n=1 Tax=Porphyra... [more]
A0A383VW618.020e-4241.38AMMECR1 domain-containing protein n=2 Tax=Scenedes... [more]
A0A8H7PYH88.650e-4240.93AMMECR1 domain-containing protein n=1 Tax=Umbelops... [more]
A0A397TU602.180e-4140.21AMMECR1 domain-containing protein n=2 Tax=Gigaspor... [more]
A0A8J4PMX35.990e-4140.51Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 22..191
e-value: 4.3E-44
score: 150.0
IPR002733AMMECR1 domainPROSITEPS51112AMMECR1coord: 8..203
score: 24.149672
IPR027485AMMECR1, N-terminalGENE3D3.30.700.20Hypothetical protein ph0010; domain 1coord: 9..137
e-value: 2.6E-29
score: 103.5
IPR023473AMMECR1TIGRFAMTIGR00296TIGR00296coord: 19..190
e-value: 1.4E-28
score: 97.9
IPR023473AMMECR1PANTHERPTHR13016AMMECR1 HOMOLOGcoord: 14..205
NoneNo IPR availablePANTHERPTHR13016:SF0ALPORT SYNDROME, MENTAL RETARDATION, MIDFACE HYPOPLASIA AND ELLIPTOCYTOSIS CHROMOSOMAL REGION GENE 1 HOMOLOG (HUMAN)coord: 14..205
IPR036071AMMECR1 domain superfamilySUPERFAMILY143447AMMECR1-likecoord: 15..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1317119..1317745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5673.t1Ggra5673.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1317119..1317745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5673.t1 ID=Ggra5673.t1|Name=Ggra5673.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MTPSLVHEASSRTEATVQMCAKAFETIATQLRPDLSPPPDFDLPSSQGGV
FVTWSVPRGRDSHYSLRGCIGTLSPAPLHIAVPRYAVQAAFHDSRFDPIS
VAELSKLKVGVSVLSQFEPAKDVFDWTTGVHGIVLYLPGGYSATYLPEVC
ADHGWTKDFCVRSLAEKAGFRGVVDESVLNSATVTRYQSSKTELAFDDYM
EMIEGTSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002733AMMECR1_domain
IPR027485AMMECR1_N
IPR023473AMMECR1
IPR036071AMMECR1_dom_sf