Ggra5659.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A2V3IU96 (Putative 16S rRNA-processing protein RimM n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU96_9FLOR) HSP 1 Score: 429 bits (1103), Expect = 4.020e-149 Identity = 211/274 (77.01%), Postives = 239/274 (87.23%), Query Frame = 0
Query: 8 TDPRLDQWAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLLMPAGQNTVINANDV 281
TDPR DQWAPENLGFLHVATITGAHGVKGELKARTEGDF VRLS KKNAQQRY+LLPGRRYPRP+NL AGRQASQ AWIVKLDG+ +RES+ KLRGARLYVRESDRP+LE GEFMVADLVG RVSL +++D DPWYT+E + A +PIGVVDSVITR DLC ASG G++GA++ASDL+EIA+FDV DQ V G+++EPPP EA+RVLVPFVNQIVPVVD+ NAVIVL PP+GLLDIA+VNRKRK++P RGLLMPA QNTVINAN+V
Sbjct: 56 TDPREDQWAPENLGFLHVATITGAHGVKGELKARTEGDFTPVRLSTKKNAQQRYLLLPGRRYPRPINLVAGRQASQNKAWIVKLDGYSSRESVDKLRGARLYVRESDRPSLESGEFMVADLVGSRVSLFASVDDDDPWYTAEGRETSKAVCAANPIGVVDSVITRDDLCLASGGGAAGAAVASDLIEIALFDVSDQQVEDGIHSEPPPEEAQRVLVPFVNQIVPVVDVRNAVIVLDPPDGLLDIAVVNRKRKQKPPRGLLMPAAQNTVINANEV 329
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A5J4Z6X1 (Putative 16S rRNA-processing protein RimM n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6X1_PORPP) HSP 1 Score: 185 bits (469), Expect = 1.050e-51 Identity = 106/263 (40.30%), Postives = 150/263 (57.03%), Query Frame = 0
Query: 7 GTDPRLDQWAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITK-LRGARLYVRESDRP-ALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLL 267
G D ++W P+ LGF + TI GAHGV+GEL+ R+ DF++ RL+ + RY+LLPGR++PRPV L AGRQASQ WI+K+ G NRE I + LRGA+L+V+ +DRP +L + EF+ +L G V + GD +G V VITR ++ ++G+GS+ A +DLL + +FD P EA +V +PFV QIVP VD N + + PPEGL D+A+V R + R L+
Sbjct: 115 GVDDTEEEWTPDKLGFSEICTIIGAHGVRGELRVRSSSDFSKERLTVSSSHSTRYMLLPGRKFPRPVTLVAGRQASQAECWIIKIQGITNREYINQMLRGAKLFVKSTDRPKSLRKNEFLARELEGMDVRMFDTQKFGDGV-----------------VGRVSEVITRYEI--STGAGSAAAEFGNDLLMVELFD------------RGPNREATQVWIPFVEQIVPFVDALNREVHIDPPEGLFDVAVVKRSARRIRPRALI 346
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A1X6NZ83 (RimM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ83_PORUM) HSP 1 Score: 145 bits (367), Expect = 4.990e-38 Identity = 116/321 (36.14%), Postives = 148/321 (46.11%), Query Frame = 0
Query: 15 WAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKK-----------------------------NAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSL-----------------PLN---------LNDGDPWYTSEANGQPNEIRAGD--PIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPV------EARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLLMPAGQ 272
++PE L F V ITGAHGV+GELK R D+ R RL+ QR++LLPGRRYPRPV +T R+A+Q WIV LD RE + L G RLYVR S+RP + GEF+V DLVG V L PL+ DG RA +G V +V+TR L A + S + L D+LE+A+ D G P V +A RVLVPFV IVPVVD+ VI + PP GL ++A+V R+ + RGLL A +
Sbjct: 14 YSPEALSFSEVGAITGAHGVRGELKLRAATDWARQRLAPDTPLPPRQGRRRPGASSXXXXXXXXXXXXXXXPPQRFLLLPGRRYPRPVGVTGARKATQAGTWIVSLDCCTCREEVAPLVGGRLYVRASERPRMGAGEFLVRDLVGMDVLLRPXXXXXXXXXXXAVGAPLSGAPAVAGSHAGDGXXXXXXXTAAAEVPPRASPLPVVGRVVAVMTRDQLA-AGATEESTSVLGGDVLEVALGDWAAAEAPGG-----PGVAAWDWADAVRVLVPFVRPIVPVVDVERRVIEVDPPAGLFEVAVVPRRGGVK-IRGLLTAAAE 327
BLAST of Ggra5659.t1 vs. uniprot
Match: I2CPH4 (16s rrna-processing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH4_NANGC) HSP 1 Score: 125 bits (314), Expect = 3.190e-30 Identity = 85/248 (34.27%), Postives = 128/248 (51.61%), Query Frame = 0
Query: 12 LDQWAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGD-PIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKR 258
+D + P GF+ + GAHGV G L+ + D V SA + R+I P RRYPRP+ + R A+ ++ ++VK++G RE+ LR ++YV+E +RP+LE EF V D+V V + + A D IG V VIT ++ + LA+DLLE+ + + D+ L EPPP+ +VLVPFV QIVP+VD+ + + PP GLLD+A ++
Sbjct: 106 IDPYEPNTFGFIEAGLVQGAHGVDGCLRVKGTSD---VAGSALTSPGLRHIKGPKRRYPRPITVLEAR-ATVEDTYLVKVEGIEGREAAAALRDFKIYVKEEERPSLEEDEFYVKDMVDMDVVM---------------------VGAEDVSIGRVVDVITAENARQG---------LANDLLEVELINQDDESGRPQLRTEPPPI--YQVLVPFVKQIVPIVDLPGRTLHIDPPPGLLDLAYAKAEK 317
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A7J7IFE5 (RimM domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFE5_9RHOD) HSP 1 Score: 114 bits (286), Expect = 7.690e-27 Identity = 92/272 (33.82%), Postives = 130/272 (47.79%), Query Frame = 0
Query: 10 PRLDQWAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESD-RP-ALERGEFMVADLVGCRVSLPLNLN----DGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMF------DVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLLMP 269
P L + P GF+ + TITG HGV+GE K R DF R RL ++ QRY+ L R YPRPV + GR ASQ N WI+++ G +R++ +LRGA LY+ E++ RP +L E+ + + +G V L L D +T +A G IG V V+ R+DL A D LE+ +F DVP +N + +L P ++ + VL PP GLL +A V ++ K RG L P
Sbjct: 21 PELADYDPSRFGFIEIGTITGPHGVRGECKVRLSTDFVRERLPSQ--PVQRYLKLSYRVYPRPVQVQDGRPASQPNQWIIRIHGVDDRDAAKRLRGASLYIHETEERPRSLTENEYTIREWLGRAVILRERLEMLRAQKDFRWTRQA-------LLGHCIGKVIGVVLREDL-----------GGAHDSLELLLFEGYRCLDVPFVDAFITEWN------SAEMLAPTLSD----PGTLPTLAVLDPPPGLLALAQVRKRTKPPRIRGYLPP 262
BLAST of Ggra5659.t1 vs. uniprot
Match: ribosome maturation factor RimM n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI001682E379 (ribosome maturation factor RimM n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI001682E379) HSP 1 Score: 112 bits (280), Expect = 1.660e-26 Identity = 83/233 (35.62%), Postives = 115/233 (49.36%), Query Frame = 0
Query: 22 FLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITR-QDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPV--EARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDI 251
L + I A G+KGEL+ ++ DF +N QR++L PG P+PV L +GR KN +IVKL G +R L GA+L V ESDRPALE GE+ V DL+G +V + E+ G+ +GVV V + DL E S A +A + + P+ +G P + VL+PFV I P+VDI N I ++PP GLL+I
Sbjct: 6 LLEIGKIVSAQGLKGELRVYSQSDFP----ERFENPGQRWLLRPGETEPQPVELVSGRYVDGKNLYIVKLAGVEDRTQAEALVGAKLMVPESDRPALEEGEYHVLDLIGLQV------------FNQES---------GENVGVVVDVFSAGHDLLEVK-LHQSPAPVAIES------ENPEAKAKTGKKRNKPKAAKQPETVLIPFVTAIAPIVDIENGRIEITPPPGLLEI 206
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A7S0G5Z6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5Z6_9RHOD) HSP 1 Score: 112 bits (280), Expect = 8.410e-26 Identity = 76/221 (34.39%), Postives = 114/221 (51.58%), Query Frame = 0
Query: 60 RYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLLMPAGQNTVINAND 280
RY+ P R YPRP+ + G++A+QK WIV L+G + E + L+GAR+ V+ D+P ++RGE+ V DLVG +V L G +G V+ V T ++L + + S + D+LEI + D + VLVPFV Q+VPVVDI I++ PPEGLLD+A VN + R A L + A + T++ + +
Sbjct: 97 RYLKSPNRLYPRPIKILRGQKAAQKETWIVWLEGLTSPEEVKTLKGARICVKLGDKPKVKRGEYYVRDLVGLKVRL---------------------YGKGALLGAVNDVYTHEELTKHIRNPSK---VGHDMLEIMIDDNAED----------------LVLVPFVKQLVPVVDIEGGEILIDPPEGLLDVAKVNLIVR-RGAPRLFLRAAEGTMLESEE 276
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A7R9U2Y6 (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Y6_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.520e-25 Identity = 84/248 (33.87%), Postives = 124/248 (50.00%), Query Frame = 0
Query: 12 LDQWAPENLGFLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRES---DRPALERG-EFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAM---FDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIA 252
+D + P G+++V + GAHG++G ++ R + DF R+ K R++ P RR PR V L G+ + + +IVKL G NR +L+G LYV E + AL+ E+ V DLVG RV ++ G+ +G V V+ +D+C S G L +DLLE+ + + + V + Y RR+LVPFVN IVP V IS VI + PPEGLL++A
Sbjct: 178 VDPYDPSTFGYIYVGYVMGAHGIQGHVRIRVDSDFASDRVCKK---GVRHLKDPSRRMPRAVLLEGGK-LQRDDVYIVKLSGVRNRNDAARLQGWSLYVLEEVAREPGALDADDEYFVEDLVGLRVL---------------------HVKTGEYVGSVAGVVASEDVCTVSVEG-----LGNDLLELELPPLKNYANSPVTADAYKSGFGWRERRLLVPFVNAIVPDVRISEGVIYIDPPEGLLEMA 395
BLAST of Ggra5659.t1 vs. uniprot
Match: A0A834ZKV5 (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZKV5_9MAGN) HSP 1 Score: 108 bits (270), Expect = 3.450e-24 Identity = 80/251 (31.87%), Postives = 121/251 (48.21%), Query Frame = 0
Query: 22 FLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYIL--LPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVPDQHVHSGLYNEPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLDIAIVNRKRKERPARGLLMPA 270
F+ + I HG++GEL+ + DF +R + +R++ + G+ R V L GR S + +WIV + G E +L G+ L VRE DRPALE GEF + DLVG RV L G+P+G V +V +SGAS DLL++ + + +G V A V VPFV IVP VD++ + ++PP+GLL++ + + R ++ R L+ PA
Sbjct: 78 FIEIGYICNVHGLQGELRVKPSTDFPELRFA---EPGRRWLRERISGKETVREVELVEGRGHSGQKSWIVSIGGIDTVEEAKQLVGSTLLVREEDRPALEEGEFYIPDLVGMRVILK---------------------DTGEPVGTVVNVF------------NSGAS---DLLQVMLNSDEKMNDGAGSSKSETGVSAPLVWVPFVEAIVPDVDMNRREMQITPPKGLLELNLRSDWRSKKERRQLVRPA 289
BLAST of Ggra5659.t1 vs. uniprot
Match: K9YIL0 (Ribosome maturation factor RimM n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) TaxID=292563 RepID=K9YIL0_CYASC) HSP 1 Score: 103 bits (257), Expect = 3.500e-23 Identity = 80/241 (33.20%), Postives = 112/241 (46.47%), Query Frame = 0
Query: 22 FLHVATITGAHGVKGELKARTEGDFNRVRLSAKKNAQQRYILLPGRRYPRPVNLTAGRQASQKNAWIVKLDGFGNRESITKLRGARLYVRESDRPALERGEFMVADLVGCRVSLPLNLNDGDPWYTSEANGQPNEIRAGDPIGVVDSVITRQDLCEASGSGSSGASLASDLLEIAMFDVP--DQHVHSGLYN----------EPPPVEARRVLVPFVNQIVPVVDISNAVIVLSPPEGLLD 250
+ + TI GA G+KGEL+ DF +N QR++ + P+ V L GR+ KN ++VKL+ +R L+GA L+V +SDRP LE GE+ VADL+G E Q N G+ IGVV V S A ++LE+ + P + L N +P +A VL+PFV +IVP+VDI N I ++PP GLLD
Sbjct: 6 LIEIGTIVGASGLKGELRVNITTDFP----ERFENPGQRWLTINNNSSPQIVELLRGRKVPGKNIYVVKLENVNDRTQAENLKGATLWVDKSDRPYLEEGEYHVADLIGM-----------------EVYNQQN----GENIGVVVDVF----------------SAAHEILEVKLHKQPLVETKPPVNLENISRISRRKKVKPKKTKAITVLIPFVAEIVPIVDIDNQKIEINPPTGLLD 205 The following BLAST results are available for this feature:
BLAST of Ggra5659.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5659.t1 ID=Ggra5659.t1|Name=Ggra5659.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=282bpback to top |