Ggra5657.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5657.t1
Unique NameGgra5657.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length152
Homology
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A2V3IX14 (Ubiquitin-conjugating enzyme E2 2 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IX14_9FLOR)

HSP 1 Score: 321 bits (822), Expect = 2.600e-111
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWTT 151
            MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAA+LFQENRREYDKRVQQIVEESWTT
Sbjct:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAAKLFQENRREYDKRVQQIVEESWTT 151          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A7S0ZEW7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEW7_9RHOD)

HSP 1 Score: 289 bits (739), Expect = 1.190e-98
Identity = 133/150 (88.67%), Postives = 145/150 (96.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPAR+RL+RDFKKLQNDPP+G++GAP +N+IM WNAVIFGPDDT WEGGTFKLTLQF+EDYPNKPPVVKFVS+LFHPNVY DGGICLDILQ+NWSPIYDI+AVLTSIQSLLCDPNPNSPANSEAARLFQENRREY+KRVQ IVEESWT
Sbjct:    1 MSTPARRRLMRDFKKLQNDPPAGVTGAPGENDIMLWNAVIFGPDDTAWEGGTFKLTLQFSEDYPNKPPVVKFVSRLFHPNVYADGGICLDILQNNWSPIYDITAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYNKRVQAIVEESWT 150          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A1X6PGU1 (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGU1_PORUM)

HSP 1 Score: 286 bits (733), Expect = 9.450e-98
Identity = 133/150 (88.67%), Postives = 140/150 (93.33%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPAR+RLIRDFKKLQ DPPSGISGAPCDN+IMKW+AVIFGPDDT WEGGTFKLT+ FTEDYPNKPPVVKFV +LFHPNVY DGGICLDILQ+NWSPIYDI+AVLTSIQSLLCDPNPNSPANSEAARLFQEN REY KRVQ  VE SWT
Sbjct:    1 MSTPARRRLIRDFKKLQQDPPSGISGAPCDNDIMKWSAVIFGPDDTAWEGGTFKLTMHFTEDYPNKPPVVKFVCRLFHPNVYADGGICLDILQNNWSPIYDIAAVLTSIQSLLCDPNPNSPANSEAARLFQENPREYHKRVQATVEASWT 150          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A5J4Z0Q4 (Ubiquitin-conjugating enzyme E2 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0Q4_PORPP)

HSP 1 Score: 285 bits (728), Expect = 7.140e-96
Identity = 128/147 (87.07%), Postives = 142/147 (96.60%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEE 147
            MSTPAR+RL+RDFKKLQNDPP G++GAPCDN+IMKWNA+IFGPDDT WEGGTFKLT+QF+E+YPNKPPVVKFVS+LFHPNVY DGGICLDILQSNWSPIYDI+AVLTSIQSLLCDPNPNSPANSEAARLFQENRREY+KRVQ ++ E
Sbjct:    1 MSTPARRRLMRDFKKLQNDPPIGVTGAPCDNDIMKWNAIIFGPDDTAWEGGTFKLTMQFSEEYPNKPPVVKFVSRLFHPNVYADGGICLDILQSNWSPIYDITAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYNKRVQAVIRE 147          
BLAST of Ggra5657.t1 vs. uniprot
Match: M2XY40 (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY40_GALSU)

HSP 1 Score: 281 bits (719), Expect = 1.330e-95
Identity = 124/149 (83.22%), Postives = 141/149 (94.63%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESW 149
            MSTPAR+RLIRDFKKLQ DPPSG SGAPC+N+IM+WNAVI GP+D+ WEGGTFKLT QFTEDYPNKPP VKF+SK++HPN+Y+DG ICLDILQ+ WSPIYDISA+LTSIQSLLCDPNPNSPANSEAARL+QENRREYD+RVQ++VEESW
Sbjct:    1 MSTPARRRLIRDFKKLQQDPPSGCSGAPCENDIMRWNAVILGPEDSIWEGGTFKLTFQFTEDYPNKPPTVKFISKMYHPNIYSDGSICLDILQNQWSPIYDISAILTSIQSLLCDPNPNSPANSEAARLYQENRREYDRRVQEVVEESW 149          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A251PAM8 (UBC core domain-containing protein n=90 Tax=cellular organisms TaxID=131567 RepID=A0A251PAM8_PRUPE)

HSP 1 Score: 279 bits (714), Expect = 7.990e-95
Identity = 123/150 (82.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPARKRL+RDFK+LQ DPP+GISGAP DNNIM WNAVIFGPDDTPW+GGTFKLTLQFTEDYPNKPP V+FVS++FHPN+Y DG ICLDILQ+ WSPIYD++A+LTSIQSLLCDPNPNSPANSEAAR+F EN+REY++RV++IVE+SWT
Sbjct:    1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A371I8N4 (Ubiquitin-conjugating enzyme E2 2 (Fragment) n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A371I8N4_MUCPR)

HSP 1 Score: 279 bits (714), Expect = 1.090e-94
Identity = 123/150 (82.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPARKRL+RDFK+LQ DPP+GISGAP DNNIM WNAVIFGPDDTPW+GGTFKLTLQFTEDYPNKPP V+FVS++FHPN+Y DG ICLDILQ+ WSPIYD++A+LTSIQSLLCDPNPNSPANSEAAR+F EN+REY++RV++IVE+SWT
Sbjct:   10 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 159          
BLAST of Ggra5657.t1 vs. uniprot
Match: V4VU50 (UBC core domain-containing protein n=6 Tax=Citrus TaxID=2706 RepID=V4VU50_CITCL)

HSP 1 Score: 279 bits (713), Expect = 1.130e-94
Identity = 123/150 (82.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPA+KRL+RDFK+LQ DPP+GISGAP DNNIM WNAVIFGPDDTPW+GGTFKLTLQFTEDYPNKPP V+FVS++FHPN+Y DG ICLDILQ+ WSPIYD++A+LTSIQSLLCDPNPNSPANSEAARLF EN+REY++RV++IVE+SWT
Sbjct:    1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A072TRF9 (Ubiquitin-conjugating enzyme n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A072TRF9_MEDTR)

HSP 1 Score: 279 bits (714), Expect = 1.380e-94
Identity = 123/150 (82.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPARKRL+RDFK+LQ DPP+GISGAP DNNIM WNAVIFGPDDTPW+GGTFKLTLQFTEDYPNKPP V+FVS++FHPN+Y DG ICLDILQ+ WSPIYD++A+LTSIQSLLCDPNPNSPANSEAAR+F EN+REY++RV++IVE+SWT
Sbjct:   17 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 166          
BLAST of Ggra5657.t1 vs. uniprot
Match: A0A1U8NE34 (ubiquitin-conjugating enzyme E2 2 isoform X1 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8NE34_GOSHI)

HSP 1 Score: 279 bits (714), Expect = 1.950e-94
Identity = 123/150 (82.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEGGTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIYDISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT 150
            MSTPARKRL+RDFK+LQ DPP+GISGAP DNNIM WNAVIFGPDDTPW+GGTFKLTLQFTEDYPNKPP V+FVS++FHPN+Y DG ICLDILQ+ WSPIYD++A+LTSIQSLLCDPNPNSPANSEAAR+F EN+REY++RV++IVE+SWT
Sbjct:   27 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 176          
The following BLAST results are available for this feature:
BLAST of Ggra5657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX142.600e-11199.34Ubiquitin-conjugating enzyme E2 2 n=2 Tax=Rhodymen... [more]
A0A7S0ZEW71.190e-9888.67Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6PGU19.450e-9888.67UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A5J4Z0Q47.140e-9687.07Ubiquitin-conjugating enzyme E2 2 n=1 Tax=Porphyri... [more]
M2XY401.330e-9583.22Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A251PAM87.990e-9582.00UBC core domain-containing protein n=90 Tax=cellul... [more]
A0A371I8N41.090e-9482.00Ubiquitin-conjugating enzyme E2 2 (Fragment) n=2 T... [more]
V4VU501.130e-9482.00UBC core domain-containing protein n=6 Tax=Citrus ... [more]
A0A072TRF91.380e-9482.00Ubiquitin-conjugating enzyme n=3 Tax=Pentapetalae ... [more]
A0A1U8NE341.950e-9482.00ubiquitin-conjugating enzyme E2 2 isoform X1 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..150
e-value: 9.0E-70
score: 247.8
NoneNo IPR availablePANTHERPTHR24067:SF319UBIQUITIN-CONJUGATING ENZYME E2 2coord: 1..150
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..150
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..144
e-value: 3.9E-53
score: 178.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..150
score: 59.799175
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..145
e-value: 4.16215E-71
score: 208.596
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..151
e-value: 4.5E-66
score: 223.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..150
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 77..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1276445..1277036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5657.t1Ggra5657.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1276445..1277036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5657.t1 ID=Ggra5657.t1|Name=Ggra5657.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=152bp
MSTPARKRLIRDFKKLQNDPPSGISGAPCDNNIMKWNAVIFGPDDTPWEG
GTFKLTLQFTEDYPNKPPVVKFVSKLFHPNVYNDGGICLDILQSNWSPIY
DISAVLTSIQSLLCDPNPNSPANSEAARLFQENRREYDKRVQQIVEESWT
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS