Ggra5586.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5586.t1
Unique NameGgra5586.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length544
Homology
BLAST of Ggra5586.t1 vs. uniprot
Match: A0A2V3IDE8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE8_9FLOR)

HSP 1 Score: 579 bits (1492), Expect = 4.710e-201
Identity = 330/538 (61.34%), Postives = 382/538 (71.00%), Query Frame = 0
Query:   13 MSPTELLLPPTAEEAQALASLTLNPDFVCYETILSLQGVLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFIRTRVEPGNCTNNSLSYHTSGSYLLMPAFTVNQTTYGFGIHTYFDTSSGNTCEGRPLAV-HTAESRFVKNESSGILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNKFRSVLRSGTLDMPHVLSCISEFYTANEYRRCPICSCGHNFCECMPQFAKPRHPFDTNAFLKNISLRFGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQLNTSGVEQMRSTVIEKHLSRVNPLNFSVTSYPPKYTQDMPTSGCQQPH-----GDILSELLSKQGDMFMPKPKSKSYENDSSWLL---GSAQPALGASPPFGDQDCILPDDFGLFFPQAAELMQPVQSKHPEQGSSNSTFREVSXXXXXXXXXXXXXXXXXXXSNVAVSPVTPLSSSTQCSKQEELLRLQKLEKRKARNRASAMRSHLKKKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRKLLT 541
            MS  +LLLP TAE+ QALA+L LNP+    E +LSLQGVLDFIS +DIF FLFTEDPVHI HIAMPDLSSKSIAG+F +TRVEPGN T +SLS H SGSY+L+PAFTVN TTYGFGIH + DTS+  T    P  + HTAESRFVKNESSGILLKV+DS+Q+GF+TVEYSCMSS+TR+ RS+ATFYRNKFRSVLRSG LDMP VLSCISEF TAN+YRRCPIC+ GH  C C  +  +PRHPFDT AFLKN+S+RFGK+EGVG VT YVNG+D RKALLGCRY++DG+LN S VEQMRS VIEKHL++ NPLNF V+   P  +  +PTS    P       DILSELL K+ +    K  S + EN    L    G+   +  +SPP   Q          FFP A +L   + S  P      ST  + S                   +N     +     +T  S  +ELLRLQKLEKRKARNRASAMRSHLKKKAFID LKQELHRNHD+ILHLRSREMMLRKENLRLRKLL+
Sbjct:    1 MSTAQLLLP-TAEDVQALAALALNPEVTPCEALLSLQGVLDFISDSDIFKFLFTEDPVHIPHIAMPDLSSKSIAGNFTKTRVEPGNTTVDSLSCHASGSYILVPAFTVNHTTYGFGIHMFVDTSANRTPTSPPSPLFHTAESRFVKNESSGILLKVLDSDQSGFITVEYSCMSSYTRILRSAATFYRNKFRSVLRSGRLDMPRVLSCISEFQTANQYRRCPICTRGHRSCHCTLRATEPRHPFDTIAFLKNMSMRFGKFEGVGGVTSYVNGKDRRKALLGCRYIVDGKLNLSKVEQMRSLVIEKHLNKANPLNFFVS---PDMSDQLPTSSTFAPTDTRAPSDILSELLLKEDE----KKVSMALENHDHALYLWDGNQTCSDHSSPPTLTQQS--------FFPMANDLSLLIPSTQPY----TSTAMQHSQLQTSSTGFDQVDSLVSTPNNNDTDGI-----NTTTSNPDELLRLQKLEKRKARNRASAMRSHLKKKAFIDSLKQELHRNHDSILHLRSREMMLRKENLRLRKLLS 513          
BLAST of Ggra5586.t1 vs. uniprot
Match: A0A2V3IY12 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY12_9FLOR)

HSP 1 Score: 185 bits (470), Expect = 8.120e-49
Identity = 153/507 (30.18%), Postives = 236/507 (46.55%), Query Frame = 0
Query:   51 VLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFIRTRVEPGNCTNNSLSYHTSGSYLLMPAFTVNQTTYGFGI--HTYFDTSSGNTCEGRPLAVHTAESRFVKNESSG--ILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNKFRSVLRSGTLDMPHVLSCISEFYTANEYRRCPICSCGHNFCECMPQFAKPRHPFDTNAFLKNISLRFGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQLNTSGVEQMRSTVIEKHLSRVNPL-NFSVTSYPPKYTQDMPTSGCQQPHGDI--LSELLSKQGDMFMPKPKSKSYENDSSWLLGSAQPALGASPPFGDQDCILPDDFGLFFPQAAELMQPVQSKHPEQGSSNSTFR-EVSXXXXXXXXXXXXXXXXXXXSNVAVSPVT------PLSSSTQCSKQEELLRLQKLEKRKARNRASAMRSHLKKKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRKLLTKD 543
            +L    + DI NFLF ++P+H+ ++A P L   +IA  F  T+V+P     NS+S   +G + L PAFT N  T+GFG+  + ++   + NT E    A+   E RFVKN   G  I++    +E +    +EY    S T  AR       + FR   + G+ ++  V   +    T+ E+R CP C+  H+ C+C  QFA P HP D ++FL N    FG Y GV  VT Y  G       LG R           V+++R+  I +H    +P  + S+        QD+P    ++P  D   +++ +  Q D      +  S +N ++ ++      L A+    D D     D  +  P   +       +  +  SSN     +VS                   S    S  T      P SSS   +  ++ +R  K E R+ +NRA+A RS+++KKA  D LK  L   H+ +  LRS+EM+LR+EN+RLR+LL KD
Sbjct:    1 MLRIFDNPDIHNFLFADEPIHLSYLANPQLKQSAIACSFNETKVDPTPSPQNSMSDRFAGDFFLTPAFTYNHITFGFGVMNNVFYPAQAWNTPETAMNAL--GECRFVKNSKEGYNIVIAYYGTECS---RIEYVKTVSTTTQARCVIGTKISSFRDATKGGSCNVDAVFPTVLLLQTSFEHRDCPFCNSDHSQCKCQLQFATPFHPLDHSSFLANTLSEFGNYMGVSHVTMYREGAAMCMGALGSRLSFAPSAEDDLVDRLRTLAISRHALIQDPAPSLSIQ-------QDVP----EEPRSDQVNITDEIFDQSDQ-----QQLSQQNSTNAIVTDLPCPLLATDLNFDADLEQVIDITML-PTFGDSSSRTSPEILQDISSNGVASFDVSPAPVATVQQQDSHSSRDQPSQPPTSCETQPSNTPPTSSSIGKATVKDQIRKLKAELRREKNRAAAQRSNMRKKALNDSLKSSLKTTHEKLDILRSKEMLLREENIRLRQLLGKD 485          
BLAST of Ggra5586.t1 vs. uniprot
Match: A0A2V3IWY4 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWY4_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 5.230e-44
Identity = 152/545 (27.89%), Postives = 242/545 (44.40%), Query Frame = 0
Query:   22 PTAEEAQALASLTLNPDFVCYETILSLQGVLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFIRTRVEPGNCTNNSLSYHTSGSYLLMPAFTVNQTTYGFGIHTYFDTSSGNTCEGRPLAVHT-AESRFVKNESSGILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNKFRSVLRSGTLDMPHVLSCISEFYTANEYRRCPIC--SCGHNFCECMPQFAKPRHPFDTNAFLKNISLRFGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQLNTSGVEQMRSTVIEKHLSRVNPLNFSVTSYPPKYTQDMPTSGCQQPHGDILS--------ELLSKQGDMFMPKPKSKSYENDSSW--LLGSAQPALGASPPFGDQDCILPDDFGLFFPQAAELMQPVQSKHPEQGSSNSTFREVSXXXXXXXXXXXXXXXXXXXSNVAVSPVTPLS-----------SSTQCSK----QEELLRLQKLEKRKARNRASAMRSHLKKKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRK 538
            PT  EA++LASL  +     +  I    G+L  +    + NFLFT +P+ + H+A P L  +++A + +   VEP    +NSLS   +  + + P  TV+  TYGF I        G+      L + + A +RFVKN+  G  + V   E      +EYS +++ T+  R         FR++L++G L +  ++  ++      EYR+CP C  +CG   C C     KPRHPFD  AF      R G ++G  ++  + NG   R  +LG RY+ +   +   VE++R   I  H+ +    +  + S          T   Q P   I          E L  +G +     ++ S  +   W  L    +  +GAS        I P     F       + P++   P   ++ S+   VS                    + A+    PLS           S T+ +K     +E +R  K E R+ +NRASA RS++KKKA +D LK +L  + +    LRS+E++LR+ENL L+K
Sbjct:    9 PTHAEARSLASLATSSRSQPFSGIQYFHGLLRVLQDPAVSNFLFTPEPIELHHLAHPRLYDQAVANNMLEINVEPNANVHNSLSDQWNSKHFMFPTHTVDGNTYGFIISDDI-YMPGSAWGAANLKIESRAVTRFVKNDEDGHTVFVAYYEDWDTFRLEYSKLTTSTQQIRFLVAVQGKAFRALLKNGVLSISAIVPLLAFMQMTTEYRKCPQCLRACGE--CYCAAPNIKPRHPFDYEAFKLGAMSRSGIFDGRTEMALFANGVKIRSGVLGSRYISNPSFDFDLVERLRRLAISDHVGKEAARHSHIFSNAVGVAS---TGRDQNPFDSIGKPVQLHTPLEDLGNEGALI----QTSSANDAEVWAPLTEEGEQGIGASQQ------ITPSILSSF-------LTPLEELTPSDENTQSSV--VSDPMTTDLIDTSVQLRQSNALDAAIMNSEPLSTESGSLSVDQDSGTKTAKTASPDKEQVRRLKAELRREKNRASAQRSNMKKKAVLDALKHDLATSREKADLLRSKELLLRRENLSLKK 528          
BLAST of Ggra5586.t1 vs. uniprot
Match: R7QKC1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKC1_CHOCR)

HSP 1 Score: 113 bits (282), Expect = 6.810e-23
Identity = 133/536 (24.81%), Postives = 222/536 (41.42%), Query Frame = 0
Query:   48 LQGVLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFI---RTRVEPGNCTNNSLSYHTSGSYLLMPAFTVNQTTYGFGIHTYFDTSSGNTCEGRPLAVHTAESRFVKNESSGILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNKFRSVLRSGTLDMPHVLSCISEF--YTANEYRRCPICSCGH---NFCECMPQ-FAKPRHPFDTNAFLKNISLRFGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQLNTSGVEQMRSTVIEKHLSRVNPLNFSVTSYPPKYTQ-------------DMPTSGCQQPHGDILS--ELLSKQGD----------MFMPKPKSKSYENDSSWLLGSAQPALGASPPFGDQDC---ILPDDFGLFFPQAAELMQPVQS--------KHPEQGSSNSTFREVSXXXXXXXXXXXXXXXXXXXSNVAVSPVTPLSSSTQCSKQEELLRLQKLEKRKARNRASAMRSHLKKKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRK 538
            L  +LDF +   I NFLFT++P+++ ++  P L+  ++           VE     ++         YL++P F     T G G+    D S  +       A      RFV++      L V+DS +   + ++Y  M S +     S +F R+KF SV   G L   ++ S  + +  Y+   + R P  +CG    + C C       PRHPFDT  F  + +  FG+Y G+       + ++   +  G R +    ++T+ + +M    +   L    P      S  P++ +             DM   G    HG  +S  E  S + D            +P P S+    D   L      +L  SP   D       LP    +      E  + +++        KH  Q +   +F+ ++                   S+ ++SP    S ++  S+   + +  +  +R+ +NRASA RS++KKKAFI+ +K++L  + D I  LR +EM LR ENLRLRK
Sbjct:   35 LANLLDFFNKQWICNFLFTKEPINLVYLESPGLAQSALTLDLSIASTAEVEQPLSADSVDKTLFCARYLMIPCFAAESLTLGVGV---LDPSKRDRAGQASPAAQFRNMRFVRDSKRRRTLAVMDSPEDDSIFMQYFSMDSSSCPYTLSISFRRSKFFSVAEEG-LHQVNIRSLEASYIKYSHTSHLR-PCINCGAPPASGCTCYSDGMQNPRHPFDTENFKLSFAHDFGEYHGLMSNVAKRSNQEVSHSFCGVRSLFQEAVDTAHMNRMSRWGMRTRLGNDTPR----ASVQPRFQRLDIRSDVQAVLYPDM--DGHNFAHGQRVSGNENSSNRPDDDCDTVAQPTSHLPIPPSRDTGIDLHGLEAIPLLSLSQSPCADDGSAGKEFLPTATSVIHGNLHESPREMRTEAQPQNRLKHTIQQNGELSFQAINSPERQGLQEGMEMCLS---SSGSLSPKDEHSPTSNFSQSRSIAKELQAARRRLQNRASAHRSNMKKKAFINDMKEKLRESKDRIEVLRDKEMKLRLENLRLRK 556          
BLAST of Ggra5586.t1 vs. uniprot
Match: R7QJL1 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJL1_CHOCR)

HSP 1 Score: 77.4 bits (189), Expect = 2.490e-11
Identity = 133/562 (23.67%), Postives = 217/562 (38.61%), Query Frame = 0
Query:   22 PTAEEAQALASLTLNPDFVCYETILSLQGVLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFIRTRVEPGNCTNNSLSYH-TSGSYLLMPAFTVNQTTYGFGIHTYFDTSSGNTCEGRPLAVHTAESRFVKNESSGILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNKFRSVLRSGTLDMPH-----VLSCISEFYTANEYRRCPICSCGHNFCECMPQFAKPRHPFDTNAFLKNISLR--FGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQLNTSGVEQMRSTVIEKHLSRV--NPLNFSVTSYPPKYTQDMPTSGC-QQPHGDILSELLSKQGDMFMPKPKSKSYENDSSWLLG--SAQPALGASPPFGDQ----------DCILPDDFGLFFPQAAELMQPVQSKHPEQGSSNSTFREVSXXXXXXXXXXXXXXXXXXXSNVAVSPVTPLSSSTQCSKQE-----------------ELLRLQKLEKRKARNRASAMRSHLKKKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRKLLTKD 543
            P+A +   L S T +           LQ  LD  +   I +FL T  P+H+ H++ P L   S A H   TR  P   T  SL+ H T   YL +P  +    T G G+     T+  +      L     + RFV +  +  L+ ++D+ ++  + +  S  ++      ++A+F R K +++L     D P      V + +  F   ++ R CP+C      C  +P+   P  P   +  L   S     G + GV     + NG  + K  LG             V       ++++ +    +PL+  +   PP+  +  P S    + H     + L+ Q       P  +  +  +   +G  SAQ A+    P   Q                             QP+    P   S  ++ + V                    + VA S VT  SSS++ S+ E                  ++R  + E+RK RNR SA RS+L+KK     ++ EL      +  LR REM LR ENLRLRK++ ++
Sbjct:   11 PSATDLHRLGSTTPSDSRPSLSIPALLQPFLDLATPPFIRHFLSTSTPLHVPHLSRP-LPPTSFACHITITRA-PAPFT--SLTPHRTHAQYLFVPLSSHGSITLGVGVLHSIGTALPSDRNTFSLPF---DMRFVHDAETRTLVALLDAPKSDNILLHLSRTAANLPTYTATASFPREKLQALLHP---DAPPPTARAVSAALVAFSHTSQRRTCPLCPSPSCHCN-VPEPPAPPLPAKNDLRLVRHSFARDAGTHLGVTSKLVFRNGLPAAKLALGAYSAFSHSYAPQNVAHFVGWSLQRYATETTQDPLHSLLALAPPEGAESQPPSATVSEVH--CTDDTLTSQQHACAIDPLLQGVDASTLVDVGAASAQRAVAGVAPLALQLXXXXXXXXXXXXXXXXXXXXXXXXXXAPQPILPA-PSSLSVETSLQSVETSTADRREVRSVGTCAEATAGVAQSCVT--SSSSEPSRGEAVAERKGDGETAEEDVRNVMRKMRAEERKIRNRESAQRSNLRKKYRRQEIRAELGVLMAKMESLRGREMRLRGENLRLRKMIKEE 556          
The following BLAST results are available for this feature:
BLAST of Ggra5586.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IDE84.710e-20161.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY128.120e-4930.18BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IWY45.230e-4427.89BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QKC16.810e-2324.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJL12.490e-1123.67BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.170coord: 481..543
e-value: 3.0E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..448
NoneNo IPR availableCDDcd14686bZIPcoord: 484..540
e-value: 1.96804E-9
score: 51.3921
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 482..540

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1041409..1043040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5586.t1Ggra5586.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1041409..1043040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5586.t1 ID=Ggra5586.t1|Name=Ggra5586.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=544bp
MHPTATVPHSCAMSPTELLLPPTAEEAQALASLTLNPDFVCYETILSLQG
VLDFISHADIFNFLFTEDPVHIRHIAMPDLSSKSIAGHFIRTRVEPGNCT
NNSLSYHTSGSYLLMPAFTVNQTTYGFGIHTYFDTSSGNTCEGRPLAVHT
AESRFVKNESSGILLKVIDSEQAGFVTVEYSCMSSFTRVARSSATFYRNK
FRSVLRSGTLDMPHVLSCISEFYTANEYRRCPICSCGHNFCECMPQFAKP
RHPFDTNAFLKNISLRFGKYEGVGDVTCYVNGRDSRKALLGCRYVIDGQL
NTSGVEQMRSTVIEKHLSRVNPLNFSVTSYPPKYTQDMPTSGCQQPHGDI
LSELLSKQGDMFMPKPKSKSYENDSSWLLGSAQPALGASPPFGDQDCILP
DDFGLFFPQAAELMQPVQSKHPEQGSSNSTFREVSSSNSTLREVSSSNST
LRDVSNVAVSPVTPLSSSTQCSKQEELLRLQKLEKRKARNRASAMRSHLK
KKAFIDGLKQELHRNHDNILHLRSREMMLRKENLRLRKLLTKD*
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