Ggra5535.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5535.t1
Unique NameGgra5535.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra5535.t1 vs. uniprot
Match: A0A2V3IYL8 (Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYL8_9FLOR)

HSP 1 Score: 342 bits (878), Expect = 1.240e-113
Identity = 165/318 (51.89%), Postives = 219/318 (68.87%), Query Frame = 0
Query:   28 ELIKQFLPCAALRLSRPPWTTTYFEPSIIPSSVQNITQEQLEELVSAENFTCGGTIPVTGHTLTCSPAGFTFIPPRPARFALITLHGIMPPGNEPSLLPILARLLATDSALGSQIRVEFPLYEFRRITFSTFRSPPIPVARAYFDLFPPPAAPTLEATIAAQDDRLGLYRSAQFVDFVVRSQMCKASIPTSRVALFGHSLGGFAVLETVMSTGLDLAGAVVVSGSLPRAGDYVQPGLQPFDTRRRSFNISMIHATADDIVPFAFANLSAQVLQPVFTSLGGGFSFQPLQGLDHFVKLFAD-DQVYQRVTTALRNAFVR 344
             L++ + PCAALR+S+P WTTTYFEPS++PSS QN T E+L  L    NF+C   +P T HTL CS +G+T +P    ++A+I L G+   G E + LPI   ++  D  +  ++ + +PL  FR ITFS F  PP+ + RA+FDL PPP +   E  +AAQ DRLGLYR+AQ +DF+ R+Q C   IPT RVAL GHSLGGFA+LETVMST L  A A+ VSG LPR GDY++P   P++  RRS+N++M+HAT DD++PF F N SAQ+LQP+FTSLGGGF F   QG DHF K+F   + +Y  +  ALRN F++
Sbjct:   28 RLLEAYFPCAALRISQPDWTTTYFEPSLLPSSAQNSTLEELAALARDRNFSCFEKVPGTNHTLQCSTSGYTLVPATRPKYAVIFLAGLYRKGFEAAALPIFPLIIQQDPTMFDELIIHYPLIPFRTITFSQFTEPPLTIGRAWFDLLPPPRSTAPEDLLAAQFDRLGLYRAAQRIDFITRAQHCLHGIPTDRVALLGHSLGGFALLETVMSTDLSPAAAITVSGILPRVGDYLRPNTLPYNPSRRSYNLTMVHATEDDVIPFQFGNASAQILQPLFTSLGGGFRFVAPQGFDHFSKIFFQYEGLYPLIAEALRNGFIK 345          
BLAST of Ggra5535.t1 vs. uniprot
Match: A0A2V3IXF0 (Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF0_9FLOR)

HSP 1 Score: 327 bits (839), Expect = 1.000e-107
Identity = 158/316 (50.00%), Postives = 215/316 (68.04%), Query Frame = 0
Query:   28 ELIKQFLPCAALRLSRPPWTTTYFEPSIIPSSVQNITQEQLEELVSAENFTCGGTIPVTGHTLTCSPAGFTFIPPRPARFALITLHGIMPPGNEPSLLPILARLLATDSALGSQIRVEFPLYEFRRITFSTFRSPPIPVARAYFDLFPPPAAPTLEATIAAQDDRLGLYRSAQFVDFVVRSQMCKASIPTSRVALFGHSLGGFAVLETVMSTGLDLAGAVVVSGSLPRAGDYVQPGLQPFDTRRRSFNISMIHATADDIVPFAFANLSAQVLQPVFTSLGGGFSFQPLQGLDHFVKLFADDQVYQRVTTALRNAFV 343
            +L++ + PC AL +S+P WTTTYFEPS++P SVQN T ++L  L    N +C   +P T HTL CS  G+TF+P +  ++ALI + G++  G E   LPI  R++  D  L   + + +PL  FR ITF +F SPP+ + RA+FD+ PP A+ +     +A+ DRLGLYR+AQ +DF+ R+Q C   IP +RVAL GHSLG  A+LETV+ST ++ A A+ VSG LPRAGDY +    P++  RRS+N++M+H T D +VPF   N SAQ+++PVFTSLGGGF F  LQGLDH  KLF DDQVY  +  ALRN F+
Sbjct:   29 QLLETYFPCVALDISQPDWTTTYFEPSLVPPSVQNSTLDELSALARDNNISCFQRLPGTTHTLQCSTTGYTFVPAKRPKYALIYIAGLVRKGFEGRTLPIFRRIIQEDPNLTQHVIIHYPLIPFRSITFDSFVSPPLTIGRAWFDVLPPAASTSPSDLQSAEYDRLGLYRAAQKIDFITRAQNCLHGIPPNRVALLGHSLGALALLETVLSTDINPAAAIAVSGVLPRAGDYFRQDTLPYNPSRRSYNLTMVHGTEDKVVPFFSGNASAQIVRPVFTSLGGGFRFHALQGLDHLFKLFEDDQVYSIIREALRNGFM 344          
BLAST of Ggra5535.t1 vs. uniprot
Match: A0A086W831 (Carboxylesterase n=4 Tax=Massilia TaxID=149698 RepID=A0A086W831_9BURK)

HSP 1 Score: 58.2 bits (139), Expect = 3.020e-6
Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 0
Query:  102 PRPARFALITLHGIMPPGNEPSLLPILARLLATDSALGSQIRVEFPLYEFRRITFSTFRSPPIPVARAYFDLFPPPAAPTLEATIAAQDDRLGLYRSAQFVDFVVRSQMCKASIPTSRVALFGHSLGGFAVLETVMSTGLDLAGAVVVSGSLPRAGDYVQPGLQPFDTRRRSFNISMIHATADDIVPFAFANLSAQVLQPVFTSLGGG 309
            P P + A+I LHG+   GN+   +P++  L   D +    IR  FP  +   +T +        V RA++D+          A +  ++D  GL  S + V+ ++  +  +  IP SR+ L G S G    L+T M     LAG + +SG LP A   +    Q       +  I M H T D++VPFA A  S  VL     SLG G
Sbjct:   13 PNP-QAAVIWLHGLGADGND--FVPLVNEL---DLSGLPGIRFVFPHAKTMPVTINGGY-----VMRAWYDI--------TGAELTRREDEGGLRASQRDVEALIAREKARG-IPASRIILAGFSQGCAMTLQTGMRHPEKLAGMLCLSGYLPLANVVINERTQ----ESLATPIFMAHGTHDNVVPFARARESKDVL----VSLGYG 192          
The following BLAST results are available for this feature:
BLAST of Ggra5535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYL81.240e-11351.89Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IXF01.000e-10750.00Acyl-protein thioesterase 1 n=1 Tax=Gracilariopsis... [more]
A0A086W8313.020e-630.77Carboxylesterase n=4 Tax=Massilia TaxID=149698 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 89..341
e-value: 9.5E-23
score: 82.9
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 99..337
IPR003140Phospholipase/carboxylesterase/thioesterasePFAMPF02230Abhydrolase_2coord: 193..304
e-value: 7.4E-10
score: 39.0
NoneNo IPR availablePANTHERPTHR10655LYSOPHOSPHOLIPASE-RELATEDcoord: 102..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..346
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:846567..847607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5535.t1Ggra5535.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 846567..847607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5535.t1 ID=Ggra5535.t1|Name=Ggra5535.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MRPTAAILLAALLAAHVSLAVAAWRPVELIKQFLPCAALRLSRPPWTTTY
FEPSIIPSSVQNITQEQLEELVSAENFTCGGTIPVTGHTLTCSPAGFTFI
PPRPARFALITLHGIMPPGNEPSLLPILARLLATDSALGSQIRVEFPLYE
FRRITFSTFRSPPIPVARAYFDLFPPPAAPTLEATIAAQDDRLGLYRSAQ
FVDFVVRSQMCKASIPTSRVALFGHSLGGFAVLETVMSTGLDLAGAVVVS
GSLPRAGDYVQPGLQPFDTRRRSFNISMIHATADDIVPFAFANLSAQVLQ
PVFTSLGGGFSFQPLQGLDHFVKLFADDQVYQRVTTALRNAFVRYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR003140PLipase/COase/thioEstase