Ggra5505.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5505.t1
Unique NameGgra5505.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length83
Homology
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A2V3IZX6 (zf-met2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZX6_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 4.630e-36
Identity = 67/80 (83.75%), Postives = 74/80 (92.50%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLQSSD 80
            MGGGNGAK+ATKR RNAAK+KK AK SQ+ASNQ+AM+IIC +CRATFMCTMKEASLRQHAESKHPKHQLTDCFPHL  S+
Sbjct:    1 MGGGNGAKAATKRERNAAKNKK-AKRSQMASNQSAMNIICNICRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLAKSN 79          
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A1X6PLK3 (zf-met2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PLK3_PORUM)

HSP 1 Score: 92.4 bits (228), Expect = 5.970e-23
Identity = 51/74 (68.92%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFP 74
            MGGGNGAKS TKR RNA K  K    SQ+ +N  AMSIICTVC+ +FMCTM EASLRQHAESKHPK     CFP
Sbjct:    1 MGGGNGAKSKTKRERNATKPAKGGNTSQLGANLKAMSIICTVCKQSFMCTMAEASLRQHAESKHPKSTFELCFP 74          
BLAST of Ggra5505.t1 vs. uniprot
Match: uncharacterized protein At2g23090 n=2 Tax=Chenopodiaceae TaxID=1804623 RepID=UPI0003E681E8 (uncharacterized protein At2g23090 n=2 Tax=Chenopodiaceae TaxID=1804623 RepID=UPI0003E681E8)

HSP 1 Score: 85.9 bits (211), Expect = 2.200e-20
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLQ 77
            MGGGN  KS T R RN  K+K S KGSQ+ +N+ AMSI C VC  TFMCT  E   R+HAE+KHPKH +T CFPH+Q
Sbjct:    1 MGGGNAQKSKTARERNLEKNKAS-KGSQLDTNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKHDITACFPHIQ 76          
BLAST of Ggra5505.t1 vs. uniprot
Match: A9S6M2 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S6M2_PHYPA)

HSP 1 Score: 85.5 bits (210), Expect = 3.470e-20
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLQSSDA 81
            MGGGNG K+   R RNA K K + KGSQ+ SN+ AM++ C VC  TFMCT  EA  R+HAE+KHPK  +T CFPHL +  A
Sbjct:    1 MGGGNGQKAKMARERNAEKLKGAGKGSQLESNKKAMNLQCKVCMQTFMCTSNEAKCREHAEAKHPKVDVTKCFPHLANPSA 81          
BLAST of Ggra5505.t1 vs. uniprot
Match: D7TT97 (Uncharacterized protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=D7TT97_VITVI)

HSP 1 Score: 84.7 bits (208), Expect = 6.290e-20
Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHL 76
            MGGGNG KS T R RN  K+K +AKGSQ+ SN+ AM+I C VC  TF+CT  EA  ++HAE+KHPK +L+ CFPHL
Sbjct:    1 MGGGNGQKSKTARERNMEKTK-AAKGSQLESNKKAMTIQCKVCMQTFICTTSEAKCKEHAEAKHPKSELSTCFPHL 75          
BLAST of Ggra5505.t1 vs. uniprot
Match: K4AHI2 (Uncharacterized protein n=20 Tax=Spermatophyta TaxID=58024 RepID=K4AHI2_SETIT)

HSP 1 Score: 82.0 bits (201), Expect = 7.310e-19
Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHL 76
            MGGGNG KS   R RNA K+K +AKGSQ+ +N+ AMSI C VC  TFMCT  E   R+HAE+KHPK  +  CFPHL
Sbjct:    1 MGGGNGQKSRMARERNAEKNK-AAKGSQLDTNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKSDVYQCFPHL 75          
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A6J1D6E9 (uncharacterized protein At2g23090-like n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A6J1D6E9_MOMCH)

HSP 1 Score: 80.9 bits (198), Expect = 2.090e-18
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLQ 77
            MGGGNG K+   R RN  K +K AKGSQ+ SN+ AM+I C VC  TFMCT  E   R+HAE+KHPK  ++ CFPHLQ
Sbjct:    1 MGGGNGQKAKMARERNLEK-QKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQ 76          
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A6J0ZJ93 (uncharacterized protein At2g23090 n=2 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J0ZJ93_9ROSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.150e-18
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHL 76
            MGGGNG KS   R ++  K+K + KGSQ+ +N+ AMSI C VC  TFMCT  E   ++HAE+KHPK  L+ CFPHL
Sbjct:    1 MGGGNGQKSKMAREKHLEKAKAAGKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCKEHAEAKHPKSDLSTCFPHL 76          
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A8J5EUR4 (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5EUR4_ZINOF)

HSP 1 Score: 80.9 bits (198), Expect = 5.050e-18
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHLQS 78
            MGGGNG KS T R RN  K+K + KGSQ+ SN+ AM+I C VC  TF+CT  E   R+HAE+KHPK+ +  CFPHL++
Sbjct:   34 MGGGNGQKSKTARERNLEKNKPT-KGSQLESNKKAMNIQCKVCMQTFICTTSEVKCREHAEAKHPKNDVYQCFPHLKN 110          
BLAST of Ggra5505.t1 vs. uniprot
Match: A0A2R6XG92 (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XG92_MARPO)

HSP 1 Score: 79.7 bits (195), Expect = 6.150e-18
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCTMKEASLRQHAESKHPKHQLTDCFPHL 76
            MGGGNG K+   R RNA K K  AKGSQ+ +N+ AM+I C +C  TF+CT  EA  ++HAE++HPK++L  CFPHL
Sbjct:    1 MGGGNGQKAKMARERNAEKLK-GAKGSQLETNKKAMTIQCKICMQTFICTTSEAKCKEHAEARHPKNELAQCFPHL 75          
The following BLAST results are available for this feature:
BLAST of Ggra5505.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZX64.630e-3683.75zf-met2 domain-containing protein n=1 Tax=Gracilar... [more]
A0A1X6PLK35.970e-2368.92zf-met2 domain-containing protein n=1 Tax=Porphyra... [more]
uncharacterized protein At2g23090 n=2 Tax=Chenopodiaceae TaxID=1804623 RepID=UPI0003E681E82.200e-2061.04uncharacterized protein At2g23090 n=2 Tax=Chenopod... [more]
A9S6M23.470e-2056.79Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
D7TT976.290e-2060.53Uncharacterized protein n=6 Tax=Pentapetalae TaxID... [more]
K4AHI27.310e-1960.53Uncharacterized protein n=20 Tax=Spermatophyta Tax... [more]
A0A6J1D6E92.090e-1858.44uncharacterized protein At2g23090-like n=3 Tax=Pen... [more]
A0A6J0ZJ932.150e-1855.26uncharacterized protein At2g23090 n=2 Tax=Byttneri... [more]
A0A8J5EUR45.050e-1856.41Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A2R6XG926.150e-1855.26Uncharacterized protein n=1 Tax=Marchantia polymor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039438At2g23090-like, zinc-binding domainPFAMPF12907zf-met2coord: 39..76
e-value: 7.4E-17
score: 61.1
IPR026939ZNF706/At2g23090 superfamilyGENE3D4.10.1050.10coord: 1..78
e-value: 6.2E-31
score: 108.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..70
NoneNo IPR availableSUPERFAMILY118359Expressed protein At2g23090/F21P24.15coord: 1..77
IPR039713At2g23090-likePANTHERPTHR33788OS07G0114300 PROTEINcoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:620383..620811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5505.t1Ggra5505.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 620383..620811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5505.t1 ID=Ggra5505.t1|Name=Ggra5505.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=83bp
MGGGNGAKSATKRGRNAAKSKKSAKGSQIASNQTAMSIICTVCRATFMCT
MKEASLRQHAESKHPKHQLTDCFPHLQSSDAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039438At2g23090-like_Znf
IPR026939ZNF706/At2g23090_sf
IPR039713At2g23090-like