Ggra5484.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5484.t1
Unique NameGgra5484.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length214
Homology
BLAST of Ggra5484.t1 vs. uniprot
Match: A0A2V3J122 (Centrin-4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J122_9FLOR)

HSP 1 Score: 207 bits (527), Expect = 8.020e-65
Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 0
Query:   32 SALANVQNQSDLLTHSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVENDEIFQVLDEDESGTISAEELAKVMNVFGVTITLGEALAMTDVADEYNPAPNVLQKNHIDINDFSNIMRRLNLFEHEEHSSSASD 213
            S +ANV+  SDL  H+INDL RVFDLFDL+KD+ MD  EL QVV L  +NPP  ETV   LRQACRL P+ P+PTSI F+QFLDFFAVYKL+MG V+  E+FQVLDED+SG+I   E+  VM  FGV+IT  EA AMTDVAD+ N  P+   K+ ID++DF+NI+ R++ F  +   +++S+
Sbjct:    5 SGVANVETHSDLTAHAINDLRRVFDLFDLTKDRRMDLSELRQVVLLAEENPPSPETVNNYLRQACRLSPEQPLPTSITFQQFLDFFAVYKLHMGTVDQTELFQVLDEDQSGSIGVAEMINVMRAFGVSITFDEAQAMTDVADQLNFGPSASIKDQIDMDDFANIVDRVSRFSFDTDQATSSE 186          
BLAST of Ggra5484.t1 vs. uniprot
Match: S7MWJ7 (Centrin-2 n=1 Tax=Myotis brandtii TaxID=109478 RepID=S7MWJ7_MYOBR)

HSP 1 Score: 59.7 bits (143), Expect = 1.440e-7
Identity = 49/161 (30.43%), Postives = 70/161 (43.48%), Query Frame = 0
Query:   17 PRAGGAASSLAASKMSALANVQNQSDLLTHSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVENDE----IFQVLDEDESGTISAEELAKVMNVFGVTITLGEALAMTDVAD 173
            P+A  +  +   +  S    V  + +L    I +L + FDLF     + +D REL  V+R  G  P   E  K        +   DP  T      F DFF V      + ++ E     F++ D+DE+GTIS + L +V N  G  IT  E   M D AD
Sbjct:   21 PKASSSLKTTNVASSSQPKRVSPKLELSPQQIQELRQAFDLFHTDATRTIDVRELKVVMRAMGFEPKKEEITKM-------ISEIDPEGTGK--MNFNDFFTVMTQKKCEKDSKEDILKSFKLFDDDETGTISFDNLKRVFNELGENITDEELQEMIDEAD 172          
BLAST of Ggra5484.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D9914F2 (uncharacterized protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D9914F2)

HSP 1 Score: 58.2 bits (139), Expect = 2.600e-7
Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 0
Query:   48 INDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVEND--EIFQVLDEDESGTISAEELAKVMNVFGVTITLGEALAMTDVADEYNPAPNVLQKNHIDINDFSNIM 196
            I      FDLFD      +   EL  V++  G NP   E     LR     + D     SIDF +FL   ++ K+   DVE +  E F+V D D SGTISAEEL +V++  G  +T  E   M   AD            +ID  +F++IM
Sbjct:    6 IEQYKAAFDLFDKDSTGDITAEELGAVMKSLGLNPSEQE-----LRDMVD-EVDVDKNGSIDFDEFLKMMSM-KVESTDVEKELKEAFKVFDRDNSGTISAEELRRVLSSLGENLTDAEIDEMLRSADTNGDG-------NIDYEEFASIM 142          
BLAST of Ggra5484.t1 vs. uniprot
Match: A0A7S4IWQ3 (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IWQ3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.500e-7
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0
Query:   42 DLLTHSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVEND----EIFQVLDEDESGTISAEELAKVM 153
            DL    I DL   F +FD+  D  +   EL +V+R  GQNP   E V+           DD     IDF++FL    + K  +G+ + D    + F+V D D SG+IS +EL ++M
Sbjct:   82 DLTEDEIADLKEAFSMFDIDGDGTITLTELREVMRSLGQNPTDAELVEMIN------SVDDNGDNEIDFQEFL---VLMKSRIGERDPDKELRDAFRVFDSDGSGSISRDELQRLM 188          
BLAST of Ggra5484.t1 vs. uniprot
Match: G1Q5P9 (Uncharacterized protein n=2 Tax=Myotis lucifugus TaxID=59463 RepID=G1Q5P9_MYOLU)

HSP 1 Score: 57.8 bits (138), Expect = 5.800e-7
Identity = 47/137 (34.31%), Postives = 63/137 (45.99%), Query Frame = 0
Query:   42 DLLTHSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVENDE----IFQVLDED-ESGTISAEELAKVMNVFGVTITLGEALAMTDVAD 173
            +L    I +L + FDLFD      +D REL  V+R  G  P   E +K        +   DP  T      F DFF V    M + ++ E     F++ D+D E+GTIS + L +V N  G  IT  E   M D AD
Sbjct:   24 ELSPQQIQELRQAFDLFDTDATGTIDVRELKVVMRAMGFEPKKEEIMKM-------ISEIDPEGTGK--MNFNDFFTVMTQKMCEKDSKEDILKAFKLFDDDDETGTISFDNLKRVSNELGENITDEELQEMIDEAD 151          
BLAST of Ggra5484.t1 vs. uniprot
Match: A0A0C3DI02 (Uncharacterized protein n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3DI02_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 1.510e-6
Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   55 FDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMG-DVENDEIFQVLDEDESGTISAEELAKVMNVFGVTITLGEALAMTDVADE 174
            F LFD   +  +   EL +V++  GQNP  TE ++  + +      D     SIDF +F     +   ++  + E    F+V D D SGTIS EEL KVM  FG  +T  E  +M    D+
Sbjct:   21 FSLFDADGNGTISISELHEVMKSLGQNPTKTE-IEDMVNEV-----DTDRNGSIDFDEFCKMMTMPTKDVDFEAEMKSAFKVFDMDNSGTISLEELRKVMKSFGEILTEDELDSMIKEVDK 135          
BLAST of Ggra5484.t1 vs. uniprot
Match: A0A6U0KVD2 (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KVD2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.680e-6
Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 0
Query:   42 DLLTHSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVEND----EIFQVLDEDESGTISAEELAKVM 153
            +L    I DL   F +FD+  D  +   EL +V++  GQNP   E V+           DD     IDF++FL    + K  +G+ + D    + F+V D D SG+IS +EL ++M
Sbjct:    5 NLSEEEIADLKEAFSMFDIDGDGTVTLTELKEVMKSLGQNPTDAELVEMIN------SVDDNGDNEIDFEEFL---VLMKSRIGERDPDKELRDAFKVFDTDGSGSISRDELKRLM 111          
BLAST of Ggra5484.t1 vs. uniprot
Match: A0A1R2C5X0 (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C5X0_9CILI)

HSP 1 Score: 54.7 bits (130), Expect = 5.990e-6
Identity = 46/164 (28.05%), Postives = 74/164 (45.12%), Query Frame = 0
Query:   36 NVQNQSDLLT-HSINDLHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKPDDPVPTSIDFKQFLDFFAVYKLNMGDVEND--EIFQVLDEDESGTISAEELAKVMNVFGVTITLGEALAMTDVADEYNPAPNVLQKNHIDINDFSNIM 196
            N  N +D LT   I+   R+FD+FD++KD+ +  +EL +V+R    NP   +       +A   K D      I+F+ FL  +A  K+     + D    F + D +  G I   E  +VM   G  +T  E   +   AD+           +ID N+FS ++
Sbjct:    4 NKSNMADKLTPEQIDQCKRLFDIFDINKDRTISSKELGKVLRSLNLNPSQGDL------EAMVKKADHTGTGRIEFEDFLKLYAE-KIRESITKEDVCRYFAMFDRNGDGKIDPSEFKRVMTTMGEPLTNEEVDFIISEADKD-------MNGYIDYNEFSEML 153          
The following BLAST results are available for this feature:
BLAST of Ggra5484.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J1228.020e-6557.14Centrin-4 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
S7MWJ71.440e-730.43Centrin-2 n=1 Tax=Myotis brandtii TaxID=109478 Rep... [more]
uncharacterized protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D9914F22.600e-734.44uncharacterized protein n=1 Tax=Truncatella angust... [more]
A0A7S4IWQ34.500e-734.48Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
G1Q5P95.800e-734.31Uncharacterized protein n=2 Tax=Myotis lucifugus T... [more]
A0A0C3DI021.510e-633.88Uncharacterized protein n=1 Tax=Oidiodendron maius... [more]
A0A6U0KVD22.680e-632.76Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1R2C5X05.990e-628.05Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 128..156
e-value: 0.021
score: 24.0
coord: 50..78
e-value: 1.6
score: 16.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 46..81
score: 11.305434
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 124..159
score: 12.198088
NoneNo IPR availableGENE3D1.10.238.10coord: 41..123
e-value: 3.8E-9
score: 38.6
NoneNo IPR availableGENE3D1.10.238.10coord: 124..212
e-value: 4.5E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR23048MYOSIN LIGHT CHAIN 1, 3coord: 47..169
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 137..149
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 47..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:429064..429705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5484.t1Ggra5484.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 429064..429705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5484.t1 ID=Ggra5484.t1|Name=Ggra5484.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=214bp
MISIYRVPPRLAASPRPRAGGAASSLAASKMSALANVQNQSDLLTHSIND
LHRVFDLFDLSKDKHMDFRELLQVVRLTGQNPPGTETVKQCLRQACRLKP
DDPVPTSIDFKQFLDFFAVYKLNMGDVENDEIFQVLDEDESGTISAEELA
KVMNVFGVTITLGEALAMTDVADEYNPAPNVLQKNHIDINDFSNIMRRLN
LFEHEEHSSSASD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair