Ggra5476.t3 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5476.t3
Unique Name	Ggra5476.t3
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	404

Homology

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BLAST of Ggra5476.t3 vs. uniprot
Match: A0A2V3J0W5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0W5_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 6.760e-21
Identity = 99/362 (27.35%), Postives = 165/362 (45.58%), Query Frame = 0

Query:   35 VPDEEMFGVLYRLVKNLILHRRESHIASFVSLILNKSIRENIAGDFCKKLILFIEKLSNPAMLPNLHNFLFEKVADVDITWIQREIELHFEDKLASLSPE---SMTSAFVKKVVYHLKISEFVKQRKKDLAARAKEYRRKRRFLWRNGVKFKLPSVPKYPTEVEKKKSEMRMATEQFAHEFAWYSREIFLHDDIQSHFFLARFMMNNIHNTKTEEKLKCIIGRIGDVERADFFVEMERYITALWTKLIKEL---RDFLTYADPAALLEAFCADFDPRCRKVLIDVSTEMNPLGKVSTAHAVLIARYGNRIGSFCAKAFGR----ANDELSFKKKVLLIRGSNIEALCEVYEKFQESIASRQN 386
            V DE+MF VLY ++K+ ILHR+E+  A+FVS I+ +S+ E     F  + I+ IE +++   +  L   +    AD  +   ++     F D++A        S+T++ +     HL     ++ RKK L +   E++R RR L   G+ +K   +P   T VEKK S +     +  H  AWY  E+FL  D+  HF  AR ++  I     EE     +G+ GD+ +  F+  + + I  L   ++ E+   RD    A    +   F    +P    VL    T++  L  +S  +  L+  +G R+G              N  LSF  K    R  N+ ++   Y+++   + S  N
Sbjct:  280 VRDEDMFFVLYEMMKSRILHRQEAFHAAFVSYIMQESMAEKDCSSFFLRFIMSIEAVTSRTNVQQLATAILPSPADDALERARKAANNSFRDEVAKFDETNFISLTTSMIDDSEMHL---AEIRARKKGLHSIGAEFKRMRRALDEKGMPYKYIRLPSRKTSVEKKSSVLTARRGELVHLIAWYLNELFLCGDVTVHFVYARMLVKAIIIHTKEEFYADRVGQSGDLLKRLFYDYLVQRIETLGDLIVHEMTNERDMRIQAFMWMIRSNFS---EPDRSLVLSFDETKVPELEGISIGNP-LVPDHGVRLGPLLVSKLESDIQYQNWSLSFLNK----RELNVGSVRRAYDRYLAPLGSSGN 630

The following BLAST results are available for this feature:

BLAST of Ggra5476.t3 vs. uniprot

BLAST of Ggra5476.t3 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0W5	6.760e-21	27.35	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000842_pilon	contig	tig00000842_pilon:408185..409396 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5476.t3	Ggra5476.t3	Gracilaria gracilis GNS1m male	mRNA	tig00000842_pilon 408185..409396 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5476.t3 ID=Ggra5476.t3|Name=Ggra5476.t3|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=404bp
MGQEHVRSNTIQGIRCNPRSSKFFDTRSGHEVVVVPDEEMFGVLYRLVKN
LILHRRESHIASFVSLILNKSIRENIAGDFCKKLILFIEKLSNPAMLPNL
HNFLFEKVADVDITWIQREIELHFEDKLASLSPESMTSAFVKKVVYHLKI
SEFVKQRKKDLAARAKEYRRKRRFLWRNGVKFKLPSVPKYPTEVEKKKSE
MRMATEQFAHEFAWYSREIFLHDDIQSHFFLARFMMNNIHNTKTEEKLKC
IIGRIGDVERADFFVEMERYITALWTKLIKELRDFLTYADPAALLEAFCA
DFDPRCRKVLIDVSTEMNPLGKVSTAHAVLIARYGNRIGSFCAKAFGRAN
DELSFKKKVLLIRGSNIEALCEVYEKFQESIASRQNAPVTDVPTENHEGG
SAA*