Ggra5475.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5475.t1
Unique NameGgra5475.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length254
Homology
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BLAST of Ggra5475.t1 vs. uniprot
Match: A0A2V3J3S9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3S9_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 3.410e-39
Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 0 
Query:  137 PSQAKSAKVLSP---IEKAAERRRKNRESSSRCYYNRKRIIQNLEKQLLSEKQKLTDLYDRALQLRHDNARLKKEVVTNGYALPCSRTSRAYNNSNAFSLREYLRLLHHSTYHSA 248
            P Q K    L+P   I+KAAERRRKNRESSSRCYYNRKRIIQ LEK+LL EK+KLT LYD ALQLRHDNARLKKEVVT GYA+P +    A   S +FS+R+YL LLHHSTYHS+
Sbjct:  168 PPQPKQQPKLTPSSSIDKAAERRRKNRESSSRCYYNRKRIIQTLEKELLEEKRKLTMLYDNALQLRHDNARLKKEVVTKGYAIPAAPNKNA---SASFSMRDYLELLHHSTYHSS 279
The following BLAST results are available for this feature:
BLAST of Ggra5475.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3S93.410e-3970.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..114
NoneNo IPR availableCDDcd14686bZIPcoord: 152..209
e-value: 6.98173E-5
score: 37.5249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:406299..407060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5475.t1Ggra5475.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 406299..407060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5475.t1 ID=Ggra5475.t1|Name=Ggra5475.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=254bp
MTHVAPSGLAAVQSGLPPLPLDLSPLFADGAAVLPSQSSLLLSPLLSSSS
SSSPTFLDSMFASPVMPLNDTFAAIDTLHNTAQLYNTYTKTSPNTLSDAS
STSQSSTAVIHSRSSSPALPPPPPPPKSKPASQLALPSQAKSAKVLSPIE
KAAERRRKNRESSSRCYYNRKRIIQNLEKQLLSEKQKLTDLYDRALQLRH
DNARLKKEVVTNGYALPCSRTSRAYNNSNAFSLREYLRLLHHSTYHSASQ
GSM*
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