Ggra5473.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5473.t1
Unique NameGgra5473.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length337
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5473.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..273
NoneNo IPR availableTMHMMTMhelixcoord: 164..186
NoneNo IPR availableTMHMMTMhelixcoord: 10..30
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 251..273
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:400036..401046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5473.t1Ggra5473.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 400036..401046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5473.t1 ID=Ggra5473.t1|Name=Ggra5473.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=337bp
MPTEARVEGAFVAPVAAPLWLLVLGGVLSLRAGLFRVAAVRAALGACCLL
LFVSALVPIGGGEGGGAWDGGARRAFVRDHARARARGAMPVVVRQITQPV
LSPLPQRPSPSPAPSPQPSPAPSPPPVAPVQPPAPLPGGGVVPAQSDFQV
TSIPPLSECGGPLFRMQIVLLLELCFEILFLFLRCFAERDDDDDSTTSGT
TDTNANVQINMRAYILIRAIYTVPVLIINVSIYWIGGGPTGACLSNYPEL
QVPFTHLLFYLFFCVIIIVMGLIRIDEWDPSTTDTSYRARTFRSDGPPTR
TTSYFRFSRPARRNRTSTSYSEPNFRCNLGCCAINL*
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