Ggra5460.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5460.t1
Unique NameGgra5460.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length664
Homology
BLAST of Ggra5460.t1 vs. uniprot
Match: A0A2V3IZL6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZL6_9FLOR)

HSP 1 Score: 755 bits (1949), Expect = 2.580e-266
Identity = 406/665 (61.05%), Postives = 500/665 (75.19%), Query Frame = 0
Query:    1 MCDEH-TMHMPPEEYEQMPLVIGTDDPLYHVGEKELWQALRTARDNAWVADWLFSHNSRPFHSHVSVPPEAFDNALAIHLHHDISASDQCAPVEPYCRAPPXXXXRAADAHNKPVFSKDIDLLLVPVARMDGVTVGYTFIRGIREHSVHESLRPSFAPPSNSAIEFGAPMFIPGRFTFHNDRRDYLMVVNGMSPHMTGVVSMRWRTETTRDRCFFAIPKADYSANNLPRRVLTVQCNVDYARDTAPDLAVPASECSQQLSSDAPTDHHAQVNAAQTPAYTLPHKPLPFDFGLNAGAEPAEHLKEQQVPDPFFKFDTQLDNTWAQGLETIGTIIPPGDANGLPELMQDIFPNTSFEDMEQLFNAANTAWSNDNPFPISDEQPNSLSPAISSLTSSSRSTDVEQMPRALPPSLPELDNRSSTWLVSNQVGGTPDGVGIPRRPGGNDTSSGAFSMSALYDSLQSIERSMKGDFYSPKVRKDIMHPQTGELLSRSTGKLTAKFESIDAFSLKLFREVAAQSYYATVMALSSDNRLISMAQPISPSPPIANGRMVAQQTQ-IRQRPVFKRVAPAPLAPRPVPIVAAPVVTTQDEEGPGKSKEQAARQAKLEAKRIKNRMSAARSNQKRRAQLEAQRKELATLRKRVEELTTKKQGMLEENKILRRQVQES 663
            MCD+  T+ +PP  Y+++PL I +DDPL +VG+KEL  AL+TA +N WVA+WLF+   RPFH H+SVPPEAF+ ALAIHLHHDIS  D CAPVEPY R  P     +++   K V SKDIDLLLVPVARMDGVTVGYTFIRGIREH+V +  R +F  P  S  +F  P+F+PGRFTFHN+RRDYLMVVNGMSP MTG+VSMRWR   TRDRCFFAIPKA+Y  NNLPRRVL+VQCNVD+   T P    P  + + QLS    T H             LP + L FD  +++  +P    K+QQVP P  KFD  LDN+WAQGLET+GTII P  ANG+PE+MQD FPNTS +DM QL ++  T   +++PFP+SD+  +S SPA SSLTSSS ST  E   +A+   +PE+D+ +++W+++++ G TPDGVG+PRRPGGNDTSSGAF MS+L+DSL+SIERS+KG F+SPKVRKDIMHPQTGEL+SRSTG+L AK ++ID+ SL+LFREVAAQSYY++VM++S DN L+ +   ISP+P I     + Q  + +RQ+ + KRVAPAPLAPRPV I A       D+E   KS+E+AARQAKLE KRIKNRMSAARSNQKRRAQLEAQRKELA LRKRVEELT+KKQ M+EEN  LR+QVQ+S
Sbjct:    1 MCDDDATLQVPPHAYDKIPLNIESDDPLLNVGKKELSIALQTAAENPWVAEWLFTDPGRPFHPHISVPPEAFEKALAIHLHHDISTPD-CAPVEPYQRILP-----SSEKPKKIVVSKDIDLLLVPVARMDGVTVGYTFIRGIREHTVEQKFRSAFGAPHPSDFDFNRPLFVPGRFTFHNERRDYLMVVNGMSPIMTGIVSMRWRDHATRDRCFFAIPKAEYGPNNLPRRVLSVQCNVDHVVGTDP--TPPPQDTTSQLSQQLNT-HQVXXXXXXXXXXQLPKESL-FDIHVDSNVQPFLEPKDQQVPSPLLKFDAPLDNSWAQGLETLGTIISPEQANGIPEIMQDFFPNTSMDDMAQLLSSPETFGDDNSPFPLSDDLQHSTSPAESSLTSSSGSTQPELASKAMQL-VPEMDSVNNSWILTDENGRTPDGVGVPRRPGGNDTSSGAFDMSSLFDSLRSIERSLKGHFFSPKVRKDIMHPQTGELISRSTGQLMAKLDTIDSRSLQLFREVAAQSYYSSVMSMSRDNLLLPLQPLISPTPMIQAVTPIPQPPRSVRQKTIQKRVAPAPLAPRPVSIAAXXXXXAPDDETVKKSEEEAARQAKLEVKRIKNRMSAARSNQKRRAQLEAQRKELAALRKRVEELTSKKQVMMEENMNLRKQVQKS 654          
BLAST of Ggra5460.t1 vs. uniprot
Match: R7Q702 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q702_CHOCR)

HSP 1 Score: 335 bits (858), Expect = 6.450e-103
Identity = 247/623 (39.65%), Postives = 347/623 (55.70%), Query Frame = 0
Query:  121 LLLVPVARMDGVTVGYTFIRGIREHSVHESLRPSFAPPSNSAIEFGAPMFIPGRFTFHNDRRDYLMVVNGMSPHMTGVVSMRWRTE-TTRDRCFFAIPKADYSANNLPRRVLTVQCNVDYARDTAPDLAVPASE-----------------CSQQLSSDAPTDHHAQVNAAQTPAYTLPHKPLPFDFGLNAGAEP-----AEHLKEQQVPD-PFFKFDT--------QLDNTWAQGLETIGTIIPP-GDANG-LPELMQDI------FP-----NTSFEDMEQLFNAANTA----------WSNDNPFPISDEQPN-----SLSPAISSLTSSSRSTDVEQMPRALPPSLPELDNRSSTWLVSNQVGGTPDGVGIPRRPGGNDTSSGAFSMSALYDSLQSIERSMKGDFYSPKVRKDIMHPQTGELLSRSTGKLTAKFESIDAFSLKLFREVAAQSYYATVMALSSDNRLISMA---QPISPSP--------PIANGRMVAQQTQIRQRPVFKRVAPAPLAPRPVPIVAAPVVTTQDEE------------GPGKSKEQAARQAKLEAKRIKNRMSAARSNQKRRAQLEAQRKELATLRKRVEELTTKKQGMLEENKILRRQV 660
            +LLVPV  +   T+GY F++G+   S+     P+ A  +  A     P FI GRF+F   RRD+LMVVN MSPH+TG++S+R R +   RDRCFFAIPKADY   NLP R L+VQC VDY  D   D  +PA+                     ++ S    D+H      +TP +      +  DF   A  +      ++ L +Q VP  P    D          L  +WA GL+ +G +I P  D NG +PEL+ D       FP     N  F D E + +  N+           +   NP      +P+     +LS  ++S +++S  TD      ALP S  EL     +W++S+  G TPDGVG+PR PG NDTSSG+F+M++L DSL +IE+S+KG FY PKVRKD++HP TGEL+SR TGK+ A  +++DA SL   R++AAQ+YY++V++++ D RL+ ++   +P   +P        P    R    +T+ + RP     APAPLAPRPV  ++ P      E              P  + E++AR+AKLEAKRIKNR+SAARSNQKRRAQLEAQ++ELA LR+RV+EL  ++  + EEN+IL+RQ+
Sbjct:    1 MLLVPVLNVADTTLGYAFLKGVTGASM-----PTAAGDTPDA----PPHFIAGRFSFDARRRDFLMVVNSMSPHVTGLMSIRMRDDHRARDRCFFAIPKADYGPGNLPGRALSVQCQVDYLVD-GDDSDIPATPPYEYDPNAEYGDQDRPPAEDEICSGMTWDNH------ETPNHIADPPDVERDFAHQADYDDDDDPTSDVLLDQVVPGMPNISADLFLPQHQAEPLPESWADGLDAMGAVISPFEDPNGVIPELLNDFVVKGGAFPDDDDVNPIFSDDEDILSGINSIMPESPDPAHEYRKQNPTTGHKRRPDVLDQLALSSPVNSSSTTSNGTDFS-FHTALPAS--EL-----SWILSS-AGSTPDGVGVPRVPGANDTSSGSFNMNSLVDSLATIEKSLKGSFYGPKVRKDVLHPLTGELVSRCTGKVRASIDNVDASSLFHLRKIAAQTYYSSVLSVAPDARLLPLSLASRPFISAPTTSTNLRQPTDEPRRKQGRTEPQHRP-----APAPLAPRPVVTISLPPGLPHPEVLQLPEPIASTTIPPAPTDEKSAREAKLEAKRIKNRLSAARSNQKRRAQLEAQKQELAELRERVQELKWRETKVSEENEILKRQI 593          
BLAST of Ggra5460.t1 vs. uniprot
Match: R7Q314 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q314_CHOCR)

HSP 1 Score: 160 bits (406), Expect = 1.980e-38
Identity = 172/673 (25.56%), Postives = 279/673 (41.46%), Query Frame = 0
Query:   18 PLVIGTDDPLYHVGEKELWQALRTARDNAWVADWLFSHNSRPFHSHVSVPPEAFDNALAIHLHHDISASDQCAPVEPYCRA-PPXXXXRAADAHNKPVFSKDIDLLLVPVARMDGVTVGYTFIRGIREHSVHESLRPSFAPPSNSAIEFGAPMFIPGRFTFHNDRRDYLMVVNGMSPHMTGVVSMRWRTETTRDRCFFAIPKADYSANNLPRRVLTVQCNVDYARDTAPDLAVPASECSQQLSSDAPTDHHAQVNAAQTPAYTLPHKPLPFDFGLNAGAEPAEHLKEQQVPDPFFKFDTQLDNTWAQGLETIGTIIPPGDANGLPELMQDIFPNTSFEDMEQLFNAANTAWSND-----NPFPISDEQPNSLSPAISSLTSSSRSTDVEQM---PRALPPSLPELDNRSSTWL--VSNQVGG------TPDGVGIPRRPGGNDTSSGAFSMSALYDSLQSIERSMKGDFYSPKVRKDIMHPQTGELLSRSTGKLTAKFESIDAFSLKLFREVAAQSYYATVMALSSDNRLISMAQP------ISPSPPIANGRMVA-------QQTQIRQRPVFKRVAPAPLAPRPVPIVAAPVVTTQDEEGPGKSKEQAARQAKLEAKRIKNRMSAARSNQKRRAQLEAQRKELATLRKRVEELTTKKQGMLEENKILRRQV 660
            P +   D  L      +L   LR    N  VA WLFS+++  FH+  +  P +  +   + L      S   +   P+     P        AH        + LLLVP A  DG+ +GY+   G     +   L P  +PP      F     + GRF F   ++  + VVN +SP + G++ + W     R+R FF +P   Y  + LP RVL +  N+++                             +V  A+   +   H+P         G+    H +      P       L       L+      P G+    PEL     P+ S              W++D     +P P  D  P            S    D EQ    P  +PP  P L  R +  +     Q G       T     +     G D  +G F ++ ++ SL  +ERS++G +++P++ +DIM+P TGE+++R+TG++ A  +       ++ RE+ AQ+YYA  + +++D RL    +P           P    R +A       +   +R+RP  +    A +       V    +    E G     + A R+AK+EAKR KNR+SAARSN +++ +LEAQ+KEL  L++R+  L  +K+ +++ N +LR+QV
Sbjct:   13 PPLSEADHLLLEDATSKLRSTLRLPTSNPLVARWLFSNHTSAFHADAARLPPSVFSDSLV-LRISTDVSFTPSGASPFASPFAPLAKPATRSAH--------LHLLLVPAAHADGLVLGYSAALG---DPLDRELYPFESPPG-----FLPKGLMRGRFAFCPAQKHMVCVVNDLSPDVMGIIGLDWFEHNRRNRYFFTVPNRQYDFHTLPTRVLALLQNIEF-----------------------------KVAGAEEEWFARHHRP-------REGSPQQPHARPAPEVSPLASLVADLAEEHTLALDDDA---PEGE----PEL-----PDLSI-------------WNDDFLGALDPLPPDDGPP------------SPTKRDAEQQRPSPGPMPPQSP-LSTRFAEHMEIAFGQTGAGGTLVSTSTSAAVAPTGRGVDGDAG-FDLTTMFHSLLDLERSLEGKYFAPRMSRDIMNPHTGEIVARTTGEMRASLQLAKTKDARMLRELTAQTYYAITLPVTNDARLAFPRRPEFTWQQTGQQLPEGGFRGIAKPDCRPGESCLVRKRPRNESAGDASVGNAME--VCVKCIGQMSEVGASVVDQDAIREAKMEAKRRKNRLSAARSNHRKKERLEAQKKELLDLKERMALLQGRKEMLVDANSVLRQQV 591          
BLAST of Ggra5460.t1 vs. uniprot
Match: A0A2V3IZN0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZN0_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 1.230e-17
Identity = 79/251 (31.47%), Postives = 117/251 (46.61%), Query Frame = 0
Query:  412 ELDNRSSTWLVSNQVGGTPDGVGIPRRPGGNDTSSGAFSMSALYDSLQSIERSMKGDFYSPK-----VRKDIMHPQTGELLSRSTGKLTAKFESIDAFSLKLFREVAAQSYYATVMALSSDNRLISMAQPISPSPPIANGRMVAQQTQIRQRPVFKRVAPAPLAPRPVPIVAAPVVTTQDEEGPGKSKEQAARQAKLEAKRIKNRMSAARSNQKRRAQLEAQRKELATLRKRVEELTTKKQGMLEENKILR 657
            E+D  S    + ++     D VGIP  PG  DTSSGAF+  AL +S+  IER++ G F + +       KD   PQ          +      +  AF   L R  A   Y+A    + +D R +    P +P       + +    Q  Q        P  +AP+P+P+      T Q          Q AR+  LEA+R +NRMSAARSN++R+       + L +L+KRV EL T++  ++EEN +LR
Sbjct:  247 EIDLPSQLPWIIDESSRPADNVGIPATPGNADTSSGAFNFDALSESIHDIERAICGRFSTSESAHMSFTKDFELPQ----------RTVVDISTASAFDANLLRRRAVTEYFAATAPVVTDERYLPFVLPSNP-------QALLPMPQEDQPMGHSATRPTTIAPKPLPVSNTDRQTMQSNTAA-----QQARERMLEARRRRNRMSAARSNERRKQNWNRSMQTLNSLKKRVHELETRRAQLVEENDVLR 475          
The following BLAST results are available for this feature:
BLAST of Ggra5460.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IZL62.580e-26661.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7026.450e-10339.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q3141.980e-3825.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZN01.230e-1731.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 598..659
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 585..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 412..426
NoneNo IPR availableCDDcd14686bZIPcoord: 604..661
e-value: 3.0637E-11
score: 56.7849

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:364138..366129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5460.t1Ggra5460.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 364138..366129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5460.t1 ID=Ggra5460.t1|Name=Ggra5460.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=664bp
MCDEHTMHMPPEEYEQMPLVIGTDDPLYHVGEKELWQALRTARDNAWVAD
WLFSHNSRPFHSHVSVPPEAFDNALAIHLHHDISASDQCAPVEPYCRAPP
PPPPRAADAHNKPVFSKDIDLLLVPVARMDGVTVGYTFIRGIREHSVHES
LRPSFAPPSNSAIEFGAPMFIPGRFTFHNDRRDYLMVVNGMSPHMTGVVS
MRWRTETTRDRCFFAIPKADYSANNLPRRVLTVQCNVDYARDTAPDLAVP
ASECSQQLSSDAPTDHHAQVNAAQTPAYTLPHKPLPFDFGLNAGAEPAEH
LKEQQVPDPFFKFDTQLDNTWAQGLETIGTIIPPGDANGLPELMQDIFPN
TSFEDMEQLFNAANTAWSNDNPFPISDEQPNSLSPAISSLTSSSRSTDVE
QMPRALPPSLPELDNRSSTWLVSNQVGGTPDGVGIPRRPGGNDTSSGAFS
MSALYDSLQSIERSMKGDFYSPKVRKDIMHPQTGELLSRSTGKLTAKFES
IDAFSLKLFREVAAQSYYATVMALSSDNRLISMAQPISPSPPIANGRMVA
QQTQIRQRPVFKRVAPAPLAPRPVPIVAAPVVTTQDEEGPGKSKEQAARQ
AKLEAKRIKNRMSAARSNQKRRAQLEAQRKELATLRKRVEELTTKKQGML
EENKILRRQVQES*
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