Ggra545.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra545.t1
Unique NameGgra545.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length493
Homology
BLAST of Ggra545.t1 vs. uniprot
Match: A0A2V3IEY8 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY8_9FLOR)

HSP 1 Score: 333 bits (854), Expect = 1.400e-105
Identity = 178/435 (40.92%), Postives = 265/435 (60.92%), Query Frame = 0
Query:   56 RSWEQNVQRINRKDPTFFTSKDARLMRDSTTWKEEKVYDGVKATKDNCFALDAIYKVFFRFKER-NGFEDKEGFSRISNTVSQFLRLCVAFGLCEKHHAYKENVLFDCVANLEVVECFINFNVNCCSRSTSNRKARHLRKVCMIAPGFMTDYGRTKDIARVSQYLDVIIRAKKNCAEYRCQSRQLIPIHGAQFIRECFQSSIEKLNDMVERFYSAR---EERTINQPVKFVSNWTPAFITFLVVCSAGQSPLAIAQIEVQSQEMFQRALDRASTTGYVQLPTLGGKRTQVLGHPMAAFPAFSVKFLRFHITVIHPMITAISGRNRSTGSFRTLLVHSWTGERMKSSKIAYEFRTFTSQTCTSASAISLRDVRSIVMNCFLSGFRAKLVMTEQSEAKFLDAVARHINTTALQVKKCVGVLGSAEYKSTAKELIRLL 486
            R W QN+Q I    P FF++  ++L R S  W   + Y+GV AT DNC  L  I+ VF++ KE+ N  +  + F R+SNTVSQFLRLC++ G+C ++ AY+ + LF  VA LEVV+ F++F+V C S  T  RKARHL+KVCM+A G      R+  + RVS+YLD +I A       +   +++ P +    ++ CF+ +   LNDM+ ++ S      E +      FVS WT  F+ ++V+ S GQ+PL I+++EV   E  +  L+ A+T G VQ  +L G+R   LG PM +  A S +F+RF + VI P+I++++   + TG+ R LLV + +G RM+  +++YEF  +  Q C   S++SL  ++   M+ FL GFR   +    +E + LD +ARH+NTT+ QVKKCVGV GSAEYK+ A EL R L
Sbjct:   75 RLWLQNLQSICSSQPRFFSTSSSKLSRLSRVWGNGEQYEGVNATADNCLGLWKIHDVFWKPKEQWNLSQGSDEFRRLSNTVSQFLRLCISRGVCRRNDAYQMDALFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNSESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMRPWQVSYEFHKYADQRCPEMSSVSLSSLKRSAMSVFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEYKAIASELARCL 509          
BLAST of Ggra545.t1 vs. uniprot
Match: A0A2V3IG72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG72_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 5.150e-46
Identity = 116/337 (34.42%), Postives = 166/337 (49.26%), Query Frame = 0
Query:  157 NVLFDCVANLEVVECFINFNVNCCSRSTSNRKARHLRKVCMIAPGFMTDYGRTKDIARVSQYLDVIIRAKKNCAEYRCQSRQLIPIHGAQFIRECFQSSIEKLNDMVERFYSAR---EERTINQPVKFVSNWTPAFITFLVVCSAGQSPLAIAQIEVQSQEMFQRALDRASTTGYVQLPTLGGKRTQVLGHPMA----AFPAFSVKFLRFHITVIHPMITAISGRNRSTGSFRTLLVHSWTGERMKSSKIAYEFRTFTSQTCTSASAISLRDVRSIVMNCFLSGFRAKLVMTEQSEAKFLDAVARHINTTALQVKKCVGVLGSAEYKSTAKELIRLL 486
            + LF  VA LEVV+ F++F+V C S  T  RKARHL+KVCM+A G      R+  + RVS+YLD +I A       +   +++ P +    ++ CF+ +   LNDM+ ++ S      E +      FVS WT  F+ ++V+ S GQ+PL I+++EV   E  +  L+ A+T G VQ  +L G+R   LG PM     A+ A +              I  IS   RS                 + S+  + F  F    C                  FL GFR   +    +E + LD +ARH+NTT+ QVKKCVGV GSAE+K+ A EL R L
Sbjct:    2 DALFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNSESGRDPEYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMHEERYAYEAMAC-------------ILRISQVRRS-----------------EVSRNVFCFPKFVKTQCNER---------------FLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEHKAIASELARCL 293          
The following BLAST results are available for this feature:
BLAST of Ggra545.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEY81.400e-10540.92Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IG725.150e-4634.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000153_piloncontigtig00000153_pilon:25070..26548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra545.t1Ggra545.t1Gracilaria gracilis GNS1m malemRNAtig00000153_pilon 25070..26548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra545.t1 ID=Ggra545.t1|Name=Ggra545.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=493bp
MAHPSTSFSSDGESFSLPKTHGVKRLREARDGDCKSKRHKVSQKSSPEIS
VASVKRSWEQNVQRINRKDPTFFTSKDARLMRDSTTWKEEKVYDGVKATK
DNCFALDAIYKVFFRFKERNGFEDKEGFSRISNTVSQFLRLCVAFGLCEK
HHAYKENVLFDCVANLEVVECFINFNVNCCSRSTSNRKARHLRKVCMIAP
GFMTDYGRTKDIARVSQYLDVIIRAKKNCAEYRCQSRQLIPIHGAQFIRE
CFQSSIEKLNDMVERFYSAREERTINQPVKFVSNWTPAFITFLVVCSAGQ
SPLAIAQIEVQSQEMFQRALDRASTTGYVQLPTLGGKRTQVLGHPMAAFP
AFSVKFLRFHITVIHPMITAISGRNRSTGSFRTLLVHSWTGERMKSSKIA
YEFRTFTSQTCTSASAISLRDVRSIVMNCFLSGFRAKLVMTEQSEAKFLD
AVARHINTTALQVKKCVGVLGSAEYKSTAKELIRLLGAWRTA*
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