Ggra5445.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra5445.t1
Unique Name	Ggra5445.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	632

Homology

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BLAST of Ggra5445.t1 vs. uniprot
Match: R7QC11 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC11_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 4.840e-37
Identity = 159/482 (32.99%), Postives = 207/482 (42.95%), Query Frame = 0

Query:  231 MCEGSASWQGKVRVTVVNNLTSPHF---DAFMDVTSSYNPSIDNLLASRMKRLAIMEKVAASTCIPAPIAMLEDDQKAYEQLQTHRTPNPNHASSFPSQQPTAFPAAPQSPSSSKHATFSPQRPPLLSSPPSKL----PPDISLLASPKSAPLASLSNHSALHASPPTFPFFEPDHMEVADHFLVPPNVPISEP-LMEQPMLPADPSTLPAGIETCLHGMDFEDDWC--------------------SYIASDQD---------------------------ARSVSST----LSNAGS---------------------------DVAPLPDSVPCVEDAIEMIEPENDFEMAPNAPKRKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSV-TDGFIWQIGAFAGNEAVLSARLEAMEKERKAEERRKKNRQAAARSNARKKDIMDGIRAEIRQQRKREAELRXXXXXXXSENDQLRR 625
            M EG A W GKVRVTVVN L   +    DA MDV ++Y PS+D+ LA+ M+RLAI EKV+    +PAP++            ++   P P                   SP+S +H         ++SS  S +    PPD++      + PLA   N S+         F+ P    V +   +P       P  +E  MLPADPSTLP GIE C+ GMD E+DW                     SY+ SDQ                            A ++SS+    L NA                              VAP+   V   E+A+   EP    EM P  P R                              AGM+  +DGFIWQ+G+   N  +L ARL+AMEKERKAEERRKKNRQAAARSNARKK IMDG ++EI+  + R A+LR        +N  L+R
Sbjct:    1 MREGPAKWYGKVRVTVVNTLHEKNLCDIDACMDVRATYEPSMDSALAADMQRLAIFEKVSDCAIVPAPLS-----------TRSIAEPQP-------------------SPASDEHQAR------IISSSLSDVSVQTPPDVA------ADPLAESENPSSGDDYFINAQFYAPQEAPVVEDPFMPSIQRYEIPEFLESAMLPADPSTLPGGIELCMDGMDIEEDWDALLRHEKETSPSTTSSIITESYVDSDQKVPQPHYLGEHQSQHLQQLHPSKTHPETAHNLSSSHSHPLPNASPIQSHFQPPSFRQFPWQQQLSPTGVLMPPVAPVQSPVVPKEEAVLSAEP---MEMKPQFPHR----------------------GVTLAPRPAGMAACSDGFIWQMGSSTTNNPILQARLDAMEKERKAEERRKKNRQAAARSNARKKSIMDGYKSEIKAGQARIAQLRRHELELKQQNQALKR 415

The following BLAST results are available for this feature:

BLAST of Ggra5445.t1 vs. uniprot

BLAST of Ggra5445.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QC11	4.840e-37	32.99	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 554..581
None	No IPR available	COILS	Coil	Coil	coord: 592..626
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 490..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 568..631
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	CDD	cd14686	bZIP	coord: 570..621 e-value: 1.43554E-12 score: 60.6369
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 567..624 score: 9.312066

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000842_pilon	contig	tig00000842_pilon:292049..293944 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5445.t1	Ggra5445.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000842_pilon 292049..293944 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra5445.t1 ID=Ggra5445.t1|Name=Ggra5445.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=632bp
MPPPPPPPPSLPPQPPPSPPRAVDVLGDDLHKALALLRRERLIADFMLRP
PRAPADIQLLTASRPSFILSTDEEQRGAVNGKIAMHYLGIPLFSERAGFS
GGLVVTTYTARTHPLHAPAVMADVRVGRYVRHNATGEWCIITRNDRDGVT
RLQYVRVMHAQRERICLTCKSDLFETGDIKGSVMFQCHDREWRFCSSCGS
SLPGVCLCVPSSQSPLLGTLTGLNQAVWRVMCEGSASWQGKVRVTVVNNL
TSPHFDAFMDVTSSYNPSIDNLLASRMKRLAIMEKVAASTCIPAPIAMLE
DDQKAYEQLQTHRTPNPNHASSFPSQQPTAFPAAPQSPSSSKHATFSPQR
PPLLSSPPSKLPPDISLLASPKSAPLASLSNHSALHASPPTFPFFEPDHM
EVADHFLVPPNVPISEPLMEQPMLPADPSTLPAGIETCLHGMDFEDDWCS
YIASDQDARSVSSTLSNAGSDVAPLPDSVPCVEDAIEMIEPENDFEMAPN
APKRKQQLQPQIAKKQRPLAPQPTLKPKPLAPRPAGMSVTDGFIWQIGAF
AGNEAVLSARLEAMEKERKAEERRKKNRQAAARSNARKKDIMDGIRAEIR
QQRKREAELREREARLRSENDQLRRHATARQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004827	bZIP