Ggra5436.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5436.t1
Unique NameGgra5436.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Homology
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BLAST of Ggra5436.t1 vs. uniprot
Match: A0A2V3J4X2 (Mite allergen Der p 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X2_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 7.600e-10
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0 
Query:  223 RAPRNCPLMMPPPSVRSLAQPRSVGALFSDAYIKSHLVCFYGEGCAGSLLSTSWAATAVYCLFKPTSNS--------THDVVLMDAYSSQPYGSALP 311
            RA + CP+ +P       + PR VG  +S+ YI+SH++ FY EGCAG+L+S  WA TA +CL KP+S +        +  +V + A  S P G ALP
Sbjct:   30 RASKTCPVRLPVHD----SSPRIVGGAYSNYYIQSHIISFYDEGCAGTLISPEWALTAAHCLVKPSSKAYVAGAVADSGTLVTIKAVYSHP-GFALP 121
The following BLAST results are available for this feature:
BLAST of Ggra5436.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4X27.600e-1041.24Mite allergen Der p 3 n=1 Tax=Gracilariopsis chord... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..193
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 138..157
NoneNo IPR availableTMHMMTMhelixcoord: 194..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:183481..186634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5436.t1Ggra5436.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 183481..186634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5436.t1 ID=Ggra5436.t1|Name=Ggra5436.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MWFTLRRAATRACTSMLLHGGDSGRNRQQPVEARDASVIGVDLHGRLSAW
VWVTSITRKWATVWTIGFEDDDAVCAQKIEALVHGVLTVEAVAIEGMWEP
KDLADEVVFFTLGNLQQKNSPPAVAARCTAAVNIAHPVVVVRAAAYATCV
AYGAGLAVPPAAPLAAAVTAVLQAAASHQIFVAAAGVVFALRRLVFISVV
MHFAVMLACLAVVLAQHAIAAPRAPRNCPLMMPPPSVRSLAQPRSVGALF
SDAYIKSHLVCFYGEGCAGSLLSTSWAATAVYCLFKPTSNSTHDVVLMDA
YSSQPYGSALPGATDESPLEQESHESCLAVVVTGVDNPLYTMSQGAADWG
ADGVEDLIPSSSPISAVESSL*
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