Ggra5414.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5414.t1
Unique NameGgra5414.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
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BLAST of Ggra5414.t1 vs. uniprot
Match: A0A843J1Q4 (DNA alkylation repair protein n=2 Tax=Methanomicrobium TaxID=2204 RepID=A0A843J1Q4_9EURY)

HSP 1 Score: 58.2 bits (139), Expect = 4.020e-6
Identity = 44/162 (27.16%), Postives = 78/162 (48.15%), Query Frame = 0 
Query:   21 WKTHVPQISNQLQVVVAMELFRSQYLEDKFSAIVLVGELLISDHVITPIHMPQFANLIDTSCISGYEVCDRFSQLVLKQLLIVHRHETMPIIAEWANSDNSWRARSAIWALIPLAKDAIYENLILDGCAIVLSKTEDCCKLAVGSALRALARTSPGPVYEFL 182
            WK ++  +  +  + +  EL+++ YLE+  +    + +L       TP  + +F +LID   I  +  CD F   V+   L  +  E +P++ EWA+S+N W  R+A  +LI  AK   Y +   D   I+L   ED  +   G  L+  +R     V +++
Sbjct:   60 WK-NIKNLGKEEILAICEELYKTGYLEESLAVPGFLSKL---RKEYTPEDIRRFEHLIDRY-IRNWAACDGFCTRVMGDYLEKYP-ENLPVLKEWAHSENLWLRRAAAVSLIKPAKKGEYLDEAFDIADILLRDGEDMVQKGYGWLLKEESRRHTREVLDYV 215
The following BLAST results are available for this feature:
BLAST of Ggra5414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A843J1Q44.020e-627.16DNA alkylation repair protein n=2 Tax=Methanomicro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014825DNA alkylation repair enzymePFAMPF08713DNA_alkylationcoord: 4..188
e-value: 1.1E-18
score: 67.7
NoneNo IPR availableGENE3D1.25.10.90coord: 2..207
e-value: 2.7E-23
score: 84.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..346
NoneNo IPR availablePANTHERPTHR34070ARMADILLO-TYPE FOLDcoord: 4..200
NoneNo IPR availableCDDcd06561AlkD_likecoord: 38..193
e-value: 1.62851E-18
score: 80.4341
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 16..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:373953..374993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5414.t1Ggra5414.t1Gracilaria gracilis GNS1m malemRNAtig00000099_pilon 373953..374993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5414.t1 ID=Ggra5414.t1|Name=Ggra5414.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MARGVRIMGVRYCVHNWYTDWKTHVPQISNQLQVVVAMELFRSQYLEDKF
SAIVLVGELLISDHVITPIHMPQFANLIDTSCISGYEVCDRFSQLVLKQL
LIVHRHETMPIIAEWANSDNSWRARSAIWALIPLAKDAIYENLILDGCAI
VLSKTEDCCKLAVGSALRALARTSPGPVYEFLNEDHNLLRMSAHGLSRAC
GDHNEWKQFFRNKRKDIVRNRRPVLPGADAVENSGAGALAASAASAPMDT
DQMAVSLPATTEVRPPQATRGVGASESGLPSISELIGMRSTARGSTAGAV
PVASLIHASGAQDEREAGETDEANNAATLANEEAGNGVANGEREDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014825DNA_alkylation
IPR016024ARM-type_fold