Ggra5325.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5325.t1
Unique NameGgra5325.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
BLAST of Ggra5325.t1 vs. uniprot
Match: A0A2V3IT57 (Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT57_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 6.480e-126
Identity = 164/217 (75.58%), Postives = 188/217 (86.64%), Query Frame = 0
Query:    7 QRWIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVEHGIRRVADADAQECYQTVCRPDDRFIQVCFRADLWDECYCSFQSDDNDWTKPPGQLMTVVPSKQPGRYFQLVVEASRMACAFNDGGENWDSRLNSNYLIGCPGKYEVCDGAAKYVSPSDKDLQTAPVKEA 223
            Q+WIEIFHSKPSMR+CYLLEKLPD +F+KPS QN+LRDASHIRDGFRVFRLPFR IEFVLTNGTDRNWEDNNG NY I  PGRYVVEHGIRRVADADA EC+QT+CRP D+FIQ+ FRADLW  CYCS+Q DD +WTK PG+LM ++ +   GR+F++VVEASRMACAFNDGGENWDSRLN NYLIGCPGKY+V  G  +Y+SPSD DL+  P+ +A
Sbjct:    8 QQWIEIFHSKPSMRFCYLLEKLPDSSFTKPSAQNQLRDASHIRDGFRVFRLPFRPIEFVLTNGTDRNWEDNNGHNYTIQQPGRYVVEHGIRRVADADANECFQTLCRPLDKFIQISFRADLWHTCYCSYQRDDLEWTKAPGELMKLLSTPSEGRHFEIVVEASRMACAFNDGGENWDSRLNKNYLIGCPGKYQVSAGVVRYISPSDPDLKRQPLADA 224          
BLAST of Ggra5325.t1 vs. uniprot
Match: A0A7S3EKX2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKX2_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 1.690e-53
Identity = 94/208 (45.19%), Postives = 129/208 (62.02%), Query Frame = 0
Query:    9 WIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVEH-GIRRVADADAQECYQTVCRPDDRFIQVCFRAD-LWDECYCSFQSDDNDWTKPPGQLMTVVPSKQPGRYFQLVVEASRMACAFNDGGENWDSRLNSNYLIGCPGKYEVCDGAAKYVSPSDKD 214
            WIEIFHS PS   C+++ +  D    K + +  LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G+NY I+  GRY+V +  + RV DAD   C + + R +DRFI++ ++    W  C   +  DD+ W + PG+ MT + SK P + F L  EA  M  AF DG E WDS ++ NY +G PGKY V DG  KY+ PS+ D
Sbjct:   15 WIEIFHSMPSWDRCFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRFIELIYQPPPSWLGCSIIYSKDDDPWLEAPGEAMTRIKSKDP-QLFMLRTEAQHMTFAFFDGVEEWDSNMDENYKVGLPGKYFVRDGVCKYIGPSEMD 219          
BLAST of Ggra5325.t1 vs. uniprot
Match: M1UQ90 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UQ90_CYAM1)

HSP 1 Score: 146 bits (369), Expect = 8.830e-40
Identity = 83/216 (38.43%), Postives = 123/216 (56.94%), Query Frame = 0
Query:    6 PQRWIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLP-FRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVE-HGIRRVADADAQECYQTVCRPDDRFIQVCFRADL-WDECYCSFQSDDN---DWTKPPGQLMTVVPSKQPGRYFQLVVEASRMACAFNDGGENWDSRLNSNYLIGCPGKYEVCDGAAKYVSPSDKDL 215
            P  WIEIFHS PS+   Y++       ++ P++  R  DASHIR+GFRVFR+   +R+EF +T+G  R W++N GQNYVI  PGRYVV   G++R  D D  E  +   +  D++I++ +RA   W + Y  +    N   DWT  PG+LM   P +Q   + +L+  A  +    N+GGE +D+    N+    PG+Y V     KY+  S++DL
Sbjct:   22 PNSWIEIFHSMPSLENVYIIFSKDGGKWT-PNRTYRFEDASHIREGFRVFRVSGCKRLEFAITDGK-RYWDNNGGQNYVITEPGRYVVSIRGLQRRGDVDMDEIRRQQTKATDQYIEILYRAPADWSQVYIMYAKQLNAKADWTSAPGELMLRNPEEQNLYFIRLL--AKELEFVLNNGGEEYDNCKGKNFKCHTPGRYLVQHEDCKYLGRSERDL 233          
BLAST of Ggra5325.t1 vs. uniprot
Match: A0A7J7ICQ2 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICQ2_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 3.130e-34
Identity = 77/213 (36.15%), Postives = 121/213 (56.81%), Query Frame = 0
Query:    9 WIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLP-FRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVE-HGIRRVADADAQECYQTVCRPDDRFIQVCFRADL-WDECYCSFQSDDN---DWTKPPGQLMTVVPSKQPGRYFQLVVEASRMACAFNDGGENWDSRLNSNYLIGCPGKYEVCDGAAKYVSPSDKDL 215
            WIE+FHS PS+   Y++       ++ P++ ++  DASHIR+GFRVFR+   +R+EF +T+G  R W+DN GQNYVI  PGRYVV  +G+ R  D D +E ++   +  D++I++ +R+   W   +  +    N    WT  PG+ M   P ++ G +F  ++ A  +   F DG   +D+R   NY    PG+Y V     +Y+  S +DL
Sbjct:   28 WIEVFHSMPSLENVYIIFSKDGGPWT-PNRTHKFEDASHIREGFRVFRVGGCKRLEFAITDGK-RYWDDNGGQNYVITEPGRYVVSINGLERRGDVDIEEIHRQQTKTVDQYIEILYRSPPGWQRAHILYAKQLNAQGGWTPSPGEPMLRNP-EESGLFFIRLL-AKELEFVFTDGENAYDNRKGKNYKCHTPGRYIVQYEQCQYLGRSQRDL 236          
BLAST of Ggra5325.t1 vs. uniprot
Match: A0A7S0BE94 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE94_9RHOD)

HSP 1 Score: 116 bits (290), Expect = 4.970e-29
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    9 WIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVEH-GIRRVADADAQECYQTVCRPDDRFIQVCFRA-DLWDECYCSFQSDDNDWTKPPGQLM 150
            WIEIFHS PS   C+++ +  D    K + +  LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G+NY+++  GRY+V +  + RV DAD   C + + R  DRFI++ ++    W  C   +  D+  W + PG+ M
Sbjct:   15 WIEIFHSMPSWDRCFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKAWTLEFYLTNGSSRNWENNSGKNYLVEESGRYLVSYKSMSRVGDADIGSCIRAM-RRHDRFIELIYQPPSSWLGCSIIYSKDNEPWLEAPGEAM 156          
BLAST of Ggra5325.t1 vs. uniprot
Match: A0A7S3A1A4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1A4_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 3.800e-23
Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    9 WIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVEH-GIRRVADADAQECYQTVCRPDDRF 118
            WIEIFHS PS   C+++ +  D    K + +  LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G+NY I+  GRY+V +  + RV DAD   C + + R +DR+
Sbjct:   15 WIEIFHSMPSWDRCFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRY 123          
The following BLAST results are available for this feature:
BLAST of Ggra5325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IT576.480e-12675.58Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S3EKX21.690e-5345.19Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1UQ908.830e-4038.43Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7ICQ23.130e-3436.15Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0BE944.970e-2941.67Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3A1A43.800e-2346.85Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 26..104
e-value: 5.1E-6
score: 28.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 110..211
e-value: 5.4E-14
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:98202..98936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5325.t1Ggra5325.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 98202..98936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5325.t1 ID=Ggra5325.t1|Name=Ggra5325.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MAPIAPQRWIEIFHSKPSMRYCYLLEKLPDDTFSKPSQQNRLRDASHIRD
GFRVFRLPFRRIEFVLTNGTDRNWEDNNGQNYVIDVPGRYVVEHGIRRVA
DADAQECYQTVCRPDDRFIQVCFRADLWDECYCSFQSDDNDWTKPPGQLM
TVVPSKQPGRYFQLVVEASRMACAFNDGGENWDSRLNSNYLIGCPGKYEV
CDGAAKYVSPSDKDLQTAPVKEAAPLSVAPSLGIPAAALPAVVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold