Ggra5319.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5319.t1
Unique NameGgra5319.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Homology
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A2V3IJR6 (Peroxisome biogenesis protein 22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJR6_9FLOR)

HSP 1 Score: 194 bits (492), Expect = 1.140e-57
Identity = 115/195 (58.97%), Postives = 140/195 (71.79%), Query Frame = 0
Query:   67 KPRWLARVHVVTMGAVCSRAQRGALFCRREEAVLEAAAMARGGADGGGACKEHML----DDAAQIPELPFVVRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVALVTSDADACAAAAQQPLGSNVARFSSLASFF 257
            KP+WLARV  VT+GA C+RA+  ALF   + A LE    A   AD   A  E  L     +  Q+P+LP VV+P+ V  L+RFA+LFDL++VVRVDDDD E+ VT AL A G+FEPGLL   KLLFC+TDTGR+SVARQLEPQLH+DET +V+T LQRFV FVALVT   D+ ++   QPL SNVA F+SLASFF
Sbjct:   76 KPQWLARVRRVTLGAKCTRAEMCALFVSHQRA-LEQIESAAPPADHVVADSEKALLKEKSEQPQLPDLPIVVQPSAVPHLKRFAKLFDLYIVVRVDDDDTERHVTDALSAVGVFEPGLLDPRKLLFCDTDTGRVSVARQLEPQLHIDETTSVITALQRFVPFVALVTPVRDSTSS---QPLASNVAAFASLASFF 266          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A2I0BBK1 (Peroxisome biogenesis protein 22 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BBK1_9ASPA)

HSP 1 Score: 84.0 bits (206), Expect = 1.810e-15
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0
Query:  134 VRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVALVTSD 231
            VRP++V  L   A+  D++++ R+ DD+ E+ V  AL +AGLF    L R K+LFC T++GRIS  RQLEP  HVD  + +++ L RFV     ++SD
Sbjct:  152 VRPSVVEVLHEIAKYCDIYLMDRILDDECEERVLEALESAGLFHSSGLSRDKVLFCGTESGRISFVRQLEPDWHVDSNLDIISQLARFVRCQLFISSD 249          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A5J4Z1W5 (Peroxisome biogenesis protein 22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1W5_PORPP)

HSP 1 Score: 79.0 bits (193), Expect = 3.610e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0
Query:  141 ALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVAL 227
            A+ + A  F+L+++VRVD D  EQLV  A    GLF  G   + KLLFCET  GR S+ARQ+EP+LH+D +  V   L RF+ + A+
Sbjct:  287 AIEKLAGTFNLYMIVRVDTDQDEQLVRLAFEKVGLFTTGAA-KHKLLFCETLMGRASIARQIEPELHMDSSTIVTESLFRFIRYAAV 372          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A7J7QDW6 (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QDW6_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 7.060e-13
Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 0
Query:  142 LRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLF--EPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVALVTSDADACAAAAQQPLGSNVARFSSLASFF 257
            LR      D +V+ +V DD G+ +VT AL AAGL   +PG L   +LLFC T  G++S+ RQLEP LH+D +   +  L+RF+  +  V     A AA        NVA  SSL +FF
Sbjct:  172 LRELCACADTYVITQVQDDVGQAVVTGALEAAGLVGSQPGQLKPHRLLFCSTLDGKVSIVRQLEPDLHIDGSAKTIEDLKRFMPQLLHVVQTGSAAAAQGSP----NVASSSSLQAFF 285          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A383VKM4 (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKM4_TETOB)

HSP 1 Score: 75.1 bits (183), Expect = 3.360e-12
Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 0
Query:  142 LRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLF--EPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVALVTSDADACAAAAQQPLGSNVARFSSLASFF 257
            LR      D +++ +V DD G+ +VT AL AAGL   +PG L   +LLFC T  G++S+ RQ+EP LH+D +   +  L+RF+  +  +     A AA        NVA  SSL +FF
Sbjct:  170 LRELCACADTYIITQVQDDVGQAVVTGALEAAGLVGSQPGQLRPHRLLFCSTLDGKVSMVRQIEPDLHIDGSAKTIEDLKRFMPQLLHIVQPGSAAAAQGSP----NVASSSSLQAFF 283          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A8J4RXA9 (Uncharacterized protein n=2 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RXA9_9ROSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.710e-11
Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 0
Query:  134 VRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHF 224
            VR A++  L    +  DL+++ RV DD+ E+ V  AL  AG+F  G L + K+LFC T+ GR S  RQLEP  H+D    +++ L RF+ +
Sbjct:  154 VRSAVLEVLLEITKYCDLYLMERVLDDESEKKVLMALEDAGVFTAGGLVKDKVLFCNTENGRSSFVRQLEPDWHIDTNPEIISQLARFIKY 244          
BLAST of Ggra5319.t1 vs. uniprot
Match: peroxisome biogenesis protein 22-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4DD323 (peroxisome biogenesis protein 22-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4DD323)

HSP 1 Score: 71.6 bits (174), Expect = 4.860e-11
Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 0
Query:  134 VRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHF 224
            +R  ++  ++   +  DL+++  V DD+ E+ V  AL  +G+F+ G L + K+LFC T+TGRIS  RQLE   H+D  + +++ L RF+ F
Sbjct:  152 IRLPVLEVVKEICKHCDLYLMETVLDDESEERVLSALENSGIFQSGGLIKDKVLFCSTETGRISFVRQLEADWHIDSNLDIISQLSRFIRF 242          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A1X6PIE8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIE8_PORUM)

HSP 1 Score: 70.9 bits (172), Expect = 8.330e-11
Identity = 61/167 (36.53%), Postives = 80/167 (47.90%), Query Frame = 0
Query:   63 RAADKPRWLARVHVVTMGAVCSRAQRGALFCRREEAVLEAAAMARGGADGGGACKEHMLDDAAQIPELPF--VVRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVAL 227
            R A++PR LA V  +T+G   S A+ GALF       L +A                           P    +RP +V AL   A   +L+++ RV  D+GE  V  AL   G+   G+ +  K LFCET  GR+S+ RQLEPQL +DE   VV  L RFV  V L
Sbjct:   79 RDANRPRKLATVRRLTIG---SDAEGGALF------TLSSAPPXXXXXXXXXXXXXXXXXXXXXXXSAPMRLTLRPEVVPALCTLASTVELYLLTRVSSDEGESEVVSALVDGGVIAAGM-NVHKALFCETVEGRVSMVRQLEPQLALDEAPGVVDALGRFVKSVQL 235          
BLAST of Ggra5319.t1 vs. uniprot
Match: D8UIW6 (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UIW6_VOLCA)

HSP 1 Score: 68.6 bits (166), Expect = 5.380e-10
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 0
Query:  125 AQIPELPFVVRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFE--PGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHFVALVTSDADACAAAAQQPLGSNVARFSSLASFF 257
            AQ+ E   V   AL   L+  + + D++++  V+DD GE +VT AL AAG+    PG + +  +L C +  G++ +ARQLEP+LHVD   A V  L+RF+  + LV   A   A ++Q     NV+  +SL  +F
Sbjct:  128 AQLQESATVCPKAL-EVLQEISRVSDVYLIAHVEDDVGEAVVTGALEAAGVLGNGPGQVKQHHVLCCSSLDGKVPIARQLEPELHVDGHPASVDELKRFLPRLLLVREGAPGGAGSSQV----NVSVAASLTEYF 257          
BLAST of Ggra5319.t1 vs. uniprot
Match: A0A1D1XNU5 (Peroxisome biogenesis protein 22 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XNU5_9ARAE)

HSP 1 Score: 68.2 bits (165), Expect = 9.210e-10
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0
Query:  134 VRPALVRALRRFAELFDLFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVARQLEPQLHVDETVAVVTGLQRFVHF 224
            VRP+++  L       DL+++ RV DD  E+ V  AL  AG+F    +   K+LFC+T+ GR S  RQLEP  H+D    VV  L RF+ +
Sbjct:  159 VRPSVLEVLSEITRTCDLYLMERVLDDQSEERVLSALSDAGVFTSCGIVGEKVLFCDTENGRTSFVRQLEPDWHIDTNPDVVHQLARFIKY 249          
The following BLAST results are available for this feature:
BLAST of Ggra5319.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3IJR61.140e-5758.97Peroxisome biogenesis protein 22 n=1 Tax=Gracilari... [more]
A0A2I0BBK11.810e-1543.88Peroxisome biogenesis protein 22 n=1 Tax=Apostasia... [more]
A0A5J4Z1W53.610e-1347.13Peroxisome biogenesis protein 22 n=1 Tax=Porphyrid... [more]
A0A7J7QDW67.060e-1341.53Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A383VKM43.360e-1238.98Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A8J4RXA92.710e-1140.66Uncharacterized protein n=2 Tax=Fagaceae TaxID=350... [more]
peroxisome biogenesis protein 22-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4DD3234.860e-1137.36peroxisome biogenesis protein 22-like n=2 Tax=Zing... [more]
A0A1X6PIE88.330e-1136.53Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
D8UIW65.380e-1037.04Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A1D1XNU59.210e-1040.66Peroxisome biogenesis protein 22 n=1 Tax=Anthurium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037485Peroxisome biogenesis protein 22PANTHERPTHR34126PEROXISOME BIOGENESIS PROTEIN 22coord: 132..230
NoneNo IPR availablePANTHERPTHR34126:SF1PEROXISOME BIOGENESIS PROTEIN 22coord: 132..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:17060..17851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5319.t1Ggra5319.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 17060..17851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5319.t1 ID=Ggra5319.t1|Name=Ggra5319.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MSPAVVAAAAAAAAALLYVLRGRRGGGGGGGTGGGAARDARAARRRAAVG
ADAHGRGAREDARAADKPRWLARVHVVTMGAVCSRAQRGALFCRREEAVL
EAAAMARGGADGGGACKEHMLDDAAQIPELPFVVRPALVRALRRFAELFD
LFVVVRVDDDDGEQLVTRALHAAGLFEPGLLHRSKLLFCETDTGRISVAR
QLEPQLHVDETVAVVTGLQRFVHFVALVTSDADACAAAAQQPLGSNVARF
SSLASFFAPSPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037485PEX22