Ggra5284.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5284.t1
Unique NameGgra5284.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length288
Homology
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A2V3ITD1 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITD1_9FLOR)

HSP 1 Score: 329 bits (843), Expect = 1.420e-104
Identity = 190/280 (67.86%), Postives = 209/280 (74.64%), Query Frame = 0
Query:   51 ELLARDILRQLHGAPTEDQTRETLVRLTKATRLGANVGIDTGRRKGTRTRQRVGNANQKLDRSAEAERAKEASAARRARRVGAQVKTYQSEAT-----------------------------------------RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELND--EKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALFL 287
            E +AR+I RQLHGAPTED TRE LVRL+KATRLGA+VGID+GRRK   TRQ  GNANQ LDRSAEAERAKEA+A RRARRVGAQVKTYQSEAT                                         RVG++GRNGCG TTLMRAI  RELPIPEDMD VYVE EIAGSEKTPLEVVLES+ ERQELL E+EELN+  E+ + AG E +P+V AR+ E+YE+ GQMDADKAK RAA ILDGLGFSDH M+NQTVNEFSGGWRMRISLASALFL
Sbjct:   71 EEIARNIRRQLHGAPTEDTTREKLVRLSKATRLGASVGIDSGRRKSVGTRQHAGNANQTLDRSAEAERAKEAAAVRRARRVGAQVKTYQSEATVSSVKAKYTPGSSDIHIEGLDLAFGGMSLLEGAELHIPYGRRVGVVGRNGCGKTTLMRAIARRELPIPEDMDSVYVEQEIAGSEKTPLEVVLESDVERQELLTEEEELNEKMEEAEAAGKEPEPAVTARLAEVYERLGQMDADKAKARAASILDGLGFSDHAMTNQTVNEFSGGWRMRISLASALFL 350          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A1X6PA38 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA38_PORUM)

HSP 1 Score: 145 bits (367), Expect = 7.190e-36
Identity = 99/229 (43.23%), Postives = 130/229 (56.77%), Query Frame = 0
Query:  104 GNANQKLDRSAEAERAKEASAARRARRVGAQVKTYQ---SEAT-----------------------------------------RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELND--EKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            GNAN  LDRS EA +AK+A+  RR+RR GA +++Y    SEA                                          R G+IGRNG G +TLMRA+  RELP+P DMD++YVE E+AG+++TPLE VL ++ +R  LLAE+ +L    + L  AG E       R+  +Y    +MDAD A+ RA+ ILDGLGFS  +M     +EFSGGWRMRI+LA ALF
Sbjct:   85 GNANATLDRSLEAAKAKDAADVRRSRRTGASLRSYTHAPSEAAVGSTKAKIAEGTRDVHIEGIDLSFGGLTLLSGASLHLAAGRRYGVIGRNGIGKSTLMRALARRELPLPPDMDVLYVEQEVAGNDQTPLECVLSADEKRTALLAEEAQLTASLDTLNAAGEE-------RLNLVYAALSEMDADAAESRASSILDGLGFSVQMMREMRSSEFSGGWRMRIALARALF 306          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A7S3EQX5 (Probable ATP-dependent transporter ycf16 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQX5_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 4.260e-31
Identity = 71/144 (49.31%), Postives = 107/144 (74.31%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGN-ELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            + G++GRNG G +TL++A+  RELP+ + +D++YVE EIAG E++ L++VL S+ ER+ELL E++E+    + +AG+ +L P  AAR+ E+Y++ G +D + A+ RA+ IL GLGFS  V  ++  NEFSGGWRMRI+LA ALF
Sbjct:  205 KYGVVGRNGIGKSTLLKALARRELPVSDSLDLLYVEQEIAGDERSALQIVLASDTEREELLEEEKEILA--VDEAGSSDLKPEAAARLEEIYKRLGAIDVEGAQARASSILAGLGFST-VNQSKPSNEFSGGWRMRIALACALF 345          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A7S1T603 (Probable ATP-dependent transporter ycf16 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T603_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 1.090e-30
Identity = 70/143 (48.95%), Postives = 99/143 (69.23%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            R G+IGRNG G T+L++A+  RELP+PEDMD++YVE E+   E+TPL++VL+S+ ER+ LL E+  L  + L       +  + AR+ ++Y K  ++ A +A+ RAAGIL GLGF D  M  Q   +FSGGWRMRI++A ALF
Sbjct:  215 RYGVIGRNGIGKTSLLKAVARRELPLPEDMDVLYVEQEVTADERTPLQIVLDSDSERKNLLEEEHALQAQ-LATVDPSQEEELNARLADIYAKLEEIGAGEAEGRAAGILSGLGF-DTDMQKQPSRDFSGGWRMRIAIAGALF 355          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A7S3ELP2 (Probable ATP-dependent transporter ycf16 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELP2_9RHOD)

HSP 1 Score: 124 bits (312), Expect = 1.640e-28
Identity = 69/143 (48.25%), Postives = 102/143 (71.33%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            + G+IGRNG G +TL+R++  RE+PIPE+++I++VE E AG+EKT L+ VL  + ER+ LL E+++L++EK   AG EL+        E+Y +  ++D+D A+ RA+ IL GLGF D  M N+   E+SGGWRMR++LA ALF
Sbjct:  120 KYGLIGRNGVGKSTLLRSLYNREIPIPENVNIIFVEQECAGTEKTVLQTVLLGDEEREWLLKEEKDLSNEKSGDAGTELE--------EVYLRLQEIDSDAAETRASTILTGLGF-DQEMMNKPTKEYSGGWRMRVALAQALF 253          
BLAST of Ggra5284.t1 vs. uniprot
Match: M2Y5M4 (Probable ATP-dependent transporter ycf16 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5M4_GALSU)

HSP 1 Score: 124 bits (312), Expect = 2.010e-28
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAAR-ITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            R GI+GRNG G +TLM+AI  R+LPIP DM ++YVE E+ G E+TPL+ VLES+ ER++L         EK+    N  + SV ++ I+  YE+   + ADKA+ RA+ IL GLGF++  M  Q   ++SGGWRMRI++A ALF
Sbjct:  205 RYGIVGRNGVGKSTLMKAIAHRDLPIPSDMSVLYVEQEVVGDERTPLQYVLESDEERRQLT--------EKILSYQNSSEDSVDSKDISATYERMSLLQADKAESRASAILAGLGFNNE-MQQQPSKQYSGGWRMRIAIAQALF 339          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A7S3UDX6 (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UDX6_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 2.500e-28
Identity = 68/148 (45.95%), Postives = 100/148 (67.57%), Query Frame = 0
Query:  140 SEATRVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALFL 287
            S  T+ G+IGRNG G +T++RAI  R +PIP  + +++VE EIAG + T L  VL+ + ER+ LLA+++EL ++ ++      +P     + E+YE+  ++D+D A+ RAA +L GLGF D  M N+   EFSGGWRMRI+LA ALFL
Sbjct:   64 SHGTKYGLIGRNGVGKSTMLRAINARTIPIPNFIFVIHVEQEIAGDDTTALNAVLKVDKEREWLLAKEKELLEKPVE------EPEGPISLNEVYERLEELDSDSAESRAASVLHGLGFDDE-MQNKKTREFSGGWRMRIALAQALFL 204          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A7S0G9P3 (Probable ATP-dependent transporter ycf16 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G9P3_9RHOD)

HSP 1 Score: 120 bits (302), Expect = 4.160e-28
Identity = 68/143 (47.55%), Postives = 101/143 (70.63%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            + G+IGRNG G +TL+RA+  RE+PIPE+++I++VE E AG+E++ L+ VL  + ER+ LL E+++L+ EK   AG EL+        E+Y +  ++D+D A+ RA+ IL GLGF D  M N+   E+SGGWRMR++LA ALF
Sbjct:  120 KYGLIGRNGVGKSTLLRALYNREIPIPENVNIIFVEQECAGTEQSVLQTVLLGDEEREWLLKEEKDLSLEKSGDAGTELE--------EVYLRLQEIDSDAAETRASTILTGLGF-DQEMMNKPTKEYSGGWRMRVALAQALF 253          
BLAST of Ggra5284.t1 vs. uniprot
Match: ATP-binding cassette sub-family F member 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBAB75 (ATP-binding cassette sub-family F member 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBAB75)

HSP 1 Score: 123 bits (309), Expect = 4.910e-28
Identity = 66/143 (46.15%), Postives = 96/143 (67.13%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALF 286
            R G++GRNG G +TL++ I C +L IP  +DI++VE E+ G +   L+ VLE +  R  LL E++ELND+    +    +  ++ R++++Y K   +DADKA  RA+ IL GLGFS H+ S +T  EFSGGWRMR++LA ALF
Sbjct:  206 RYGLVGRNGLGKSTLLKLIACGDLKIPSHVDILHVEQEVVGDDTLALDSVLECDEVRASLLKEEKELNDKIQATSPGSTESCLSTRLSQIYTKLEDIDADKAPSRASVILAGLGFSTHMQSQKT-REFSGGWRMRLALARALF 347          
BLAST of Ggra5284.t1 vs. uniprot
Match: A0A5J4YTW5 (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTW5_PORPP)

HSP 1 Score: 123 bits (308), Expect = 7.220e-28
Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 0
Query:  144 RVGIIGRNGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFERQELLAEKEELNDEKLKKAGNELDPSVAA-------RITELYEKHGQMDADKAKVRAAGILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALFL 287
            R GI+GRNG G +TLM+AI  RELP+PEDMD+++VE E+ G   TPLE VL+++ +R  LL E+ EL +    +A +E   S A+       R+ E+Y +     AD A  RAA IL GLGF++  M  +  + FSGGWRMRI++A ALF+
Sbjct:  227 RYGIVGRNGIGKSTLMKAIARRELPLPEDMDVLFVEQEVVGDATTPLECVLDADEQRARLLDEEAELTEALGDQATDEAPTSGASERVVLENRLKEVYAQLEMTGADTATARAAAILSGLGFTEQ-MQQKPSSSFSGGWRMRIAIARALFV 376          
The following BLAST results are available for this feature:
BLAST of Ggra5284.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITD11.420e-10467.86Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A1X6PA387.190e-3643.23Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A7S3EQX54.260e-3149.31Probable ATP-dependent transporter ycf16 n=2 Tax=R... [more]
A0A7S1T6031.090e-3048.95Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
A0A7S3ELP21.640e-2848.25Probable ATP-dependent transporter ycf16 n=3 Tax=R... [more]
M2Y5M42.010e-2848.61Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A7S3UDX62.500e-2845.95Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S0G9P34.160e-2847.55Probable ATP-dependent transporter ycf16 (Fragment... [more]
ATP-binding cassette sub-family F member 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBAB754.910e-2846.15ATP-binding cassette sub-family F member 3-like n=... [more]
A0A5J4YTW57.220e-2847.02Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..220
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 143..286
NoneNo IPR availablePANTHERPTHR19211:SF45ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 3coord: 143..286
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 139..286
e-value: 3.0E-11
score: 44.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 124..287
e-value: 1.7E-16
score: 62.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 144..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000082_piloncontigtig00000082_pilon:145535..146768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5284.t1Ggra5284.t1Gracilaria gracilis GNS1m malemRNAtig00000082_pilon 145535..146768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5284.t1 ID=Ggra5284.t1|Name=Ggra5284.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=288bp
MFTYPCISAIYQGQALRLSRDGATSSLDRCIIKIKIRCQTGVVTPTTTVL
ELLARDILRQLHGAPTEDQTRETLVRLTKATRLGANVGIDTGRRKGTRTR
QRVGNANQKLDRSAEAERAKEASAARRARRVGAQVKTYQSEATRVGIIGR
NGCGNTTLMRAIVCRELPIPEDMDIVYVELEIAGSEKTPLEVVLESEFER
QELLAEKEELNDEKLKKAGNELDPSVAARITELYEKHGQMDADKAKVRAA
GILDGLGFSDHVMSNQTVNEFSGGWRMRISLASALFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like_ATP-bd
IPR027417P-loop_NTPase