Ggra5224.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5224.t1
Unique NameGgra5224.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra5224.t1 vs. uniprot
Match: A0A2V3J693 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J693_9FLOR)

HSP 1 Score: 183 bits (464), Expect = 2.040e-54
Identity = 118/249 (47.39%), Postives = 149/249 (59.84%), Query Frame = 0
Query:    1 MCEDWFHEKCYILDALARKRSSPFDMEYELTCKDCVKRLPVLAEYYEALSVWKKNRYIKK-------------------------------------QCVELYQSGRVSYIVDRNDFVSPASEDEESXXXXXXXXXXXXEIVELEEVSASESSVPEESSAPKTFDEGERIPRKPR-----VQKKSAPPQKPVEQPKRARQGNEPLGVHEIMNIRRKITDFLREAIQTNGGNLNRDSLLSYMSELKVELL 207
            MCEDWFHEKC+  D + R ++SPF  EYELTCKDCV+ LPVLAEYYE LSVWKK    KK                                     +C+ELY++G+ SYI D++DFVSP ++DE++   XXXXXXXXX   EL EV   E   PE+    K FDEG RIPRK        Q+K++     +E  +  R   +P GV E   IRR+ITDFL+EAIQTNGGNL++D LL +M++LK E+L
Sbjct:    1 MCEDWFHEKCFKCDGIPRSQTSPFAFEYELTCKDCVRNLPVLAEYYELLSVWKKKGSHKKYKGNSCVRPKNVSVATKAGTLDYMWYPGFRLHLCKCEECMELYEAGKASYIADKSDFVSPLTDDEDTDQVXXXXXXXXXXEYELIEVEVEE---PEQPERRKVFDEGARIPRKSASGENDTQQKASG----IELQRSNRDSKKPSGVQERSAIRRRITDFLKEAIQTNGGNLSQDVLLQFMTDLKAEML 242          
BLAST of Ggra5224.t1 vs. uniprot
Match: R7QQP8 (UBR-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQP8_CHOCR)

HSP 1 Score: 115 bits (288), Expect = 4.530e-27
Identity = 78/256 (30.47%), Postives = 122/256 (47.66%), Query Frame = 0
Query:    1 MCEDWFHEKCYILDALARKRSSP---FDMEYELTCKDCVKRLPVLAEYYEALSVWKKNR-----------------------------YIKKQ-----------CVELYQSGRVSYIVDRNDFVSPASEDEESXXXXXXXXXXXXEIVELEEVSASESSVPEESSAPKTFDEGERIPRKPRVQKKSAPPQKPVEQPKRARQGNEPLGVHEIMNIRRKITDFLREAIQTNGGNLNRDSLLSYMSELKVELLSNVAEK 213
            MCEDWFHE C+  D++ R   S     D+ YE TC+DCV  LPVL EYYE  ++W +++                             ++ +Q           C +LY +   SYI+DR DF+   ++++ S            ++++ +   + + +  +         E E IPRKP     SA P            GN  L   EI +IR +I+ FL+E I++NGG++N DSL  Y+S+LK +LL +++EK
Sbjct:  129 MCEDWFHENCFKTDSVRRGSKSSHNNLDLVYEFTCRDCVATLPVLTEYYELYNIWGRDKSRIKSPDRRSSRCTRPCNADIALKPGAIDFVWRQGFRLTLCRCTDCCKLYDTAGASYIIDRGDFIGAPAQEDTSILNATNDEEILQDVIDGDWRLSRKRNRDD-------VMESEPIPRKPAAASSSASPV-----------GNL-LSTEEISDIRSRISYFLKETIESNGGSINPDSLRGYLSDLKADLLLSLSEK 365          
BLAST of Ggra5224.t1 vs. uniprot
Match: A0A2V3J6L0 (Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L0_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 1.720e-14
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 MCEDWFHEKCYILDALARKRSSPFDMEYELTCKDCVKRLPVLAEYYEALSVWK 53
            MCEDWFHEKCY L+  A   ++P++ EYE  CKDCVK LP+LAEYYE  SVWK
Sbjct:  123 MCEDWFHEKCYKLEPSAN-HATPYEFEYEFICKDCVKILPILAEYYEYYSVWK 174          
The following BLAST results are available for this feature:
BLAST of Ggra5224.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6932.040e-5447.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQP84.530e-2730.47UBR-type domain-containing protein n=1 Tax=Chondru... [more]
A0A2V3J6L01.720e-1466.04Protein mlo2 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:804671..805426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5224.t1Ggra5224.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 804671..805426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5224.t1 ID=Ggra5224.t1|Name=Ggra5224.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MCEDWFHEKCYILDALARKRSSPFDMEYELTCKDCVKRLPVLAEYYEALS
VWKKNRYIKKQCVELYQSGRVSYIVDRNDFVSPASEDEESESFSEQEDDD
DDEIVELEEVSASESSVPEESSAPKTFDEGERIPRKPRVQKKSAPPQKPV
EQPKRARQGNEPLGVHEIMNIRRKITDFLREAIQTNGGNLNRDSLLSYMS
ELKVELLSNVAEKE*
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