Ggra5193.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5193.t1
Unique NameGgra5193.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length461
Homology
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A2V3J6D2 (Transcription factor BOA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6D2_9FLOR)

HSP 1 Score: 377 bits (968), Expect = 8.190e-124
Identity = 230/461 (49.89%), Postives = 289/461 (62.69%), Query Frame = 0
Query:    1 MNQEQQHPSHYAAHQAQHQRPAEPSYXXXXXXXXXXXXXXXHPTSTALAVVTMNVYAVPCAYTVNNEPLYLQFGTHSAADAAQSASVLGQRYWHLKTQQTPRDDYAYSPATVNRPNRTYDPAQAPANERYEPYESGSAPRPQPTYEYP--PGDALARAR-EFNSAAPRSIGHEMQQQQPPQPQR-VYPEPEIARSVVPDIPRPSPVVVSKDDFSEQHAGSVPHATQVNRSANYEAEDRCSDRSGRDPGADRSVPKEQSSHHESNDIRDTSHHRMSFPDASHLNETSMKTTDYANSDRTPRSRGSKRFSDGLSNETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKKEKEEAEKKELLETLKGFMQCDPSNPRKNLSDADVLKEAAARQRVRKQDNTINLQGSMKADSPHVAMNRTSAKERREHTKASNR 457
            MN EQQ  S Y   Q Q     E +Y                 TS    VVTM VYAVPCAYT NNEPL+LQFGT +AA+AA+ A  L QRYW +++Q   R +Y  SPAT+NR  + YDP     N+RY+PYESG   R    YEYP    DA    R E+N    +S  ++ QQQ   Q Q  VY EP+IARSVVPDI R  PV   KD ++E +A +  H   VNR   ++ EDRCSDRS RDPG   S  KEQS HH+SNDIRDTS H  +     +  +   K T+   S++  R+RGSKR+S+G S  T+ R KRSRL+W+P+LH SFLAAV +LGI++AVPT+IIREM  EGLSRENVASHLQK+RS LKKEKE+AEK+ELLETLK  M+ DP+NP+K+L+D DVLK AA R+R  +   + + Q   +  +  +      +KER E T  + R
Sbjct:    1 MNPEQQQASLYPPGQTQQGPHNEHAYARAWTSQPPLRYEHVPSTSAVPGVVTMTVYAVPCAYTANNEPLFLQFGTQTAAEAARYAINLEQRYWQMRSQAEARGEYTRSPATLNRSGKPYDPTIPQHNDRYDPYESGYLRRNTQNYEYPYPSTDATQATRTEYNVTTNQSAAYDPQQQHCSQVQGPVYAEPDIARSVVPDISRTQPVTAVKDSYNEANASTAVHIAPVNRDPTFDTEDRCSDRSRRDPGQLSSTHKEQSVHHDSNDIRDTSRHNTNVXXXXNPTDVDTKRTNCTGSEKATRARGSKRYSEGQSQNTDERPKRSRLNWSPKLHASFLAAVQKLGIEHAVPTAIIREMKAEGLSRENVASHLQKYRSMLKKEKEDAEKRELLETLKTLMENDPNNPQKSLTDEDVLKVAAERKRSFQNSKSAHHQAPTQGSANPLRNEAAPSKERCEATSTNPR 461          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A7R9TMS0 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TMS0_MICPS)

HSP 1 Score: 86.3 bits (212), Expect = 4.750e-16
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:  299 GSKRFSDGLSNETEGRS-KRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            G KR SDG    T GR+ K+ RL WTPELH  F++AV+ LGI NAVP +I++ M VEG++RENVASHLQK+R  LK+
Sbjct:   44 GEKRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGIANAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 120          
BLAST of Ggra5193.t1 vs. uniprot
Match: C1N0L8 (G2-like myb-family transcription factor n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N0L8_MICPC)

HSP 1 Score: 86.7 bits (213), Expect = 5.230e-15
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:  299 GSKRFSDGLSNETEGRS-KRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            G KR SDG    T GR+ K+ RL WTPELH  F++AV+ LGI NAVP +I++ M VEG++RENVASHLQK+R  LK+
Sbjct:   41 GEKRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 117          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A090MAV9 (Myb domain, plants n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MAV9_OSTTA)

HSP 1 Score: 83.6 bits (205), Expect = 6.400e-15
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
Query:  316 KRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKKEKEEAEKKELLETLKGFMQCDPSNPRKNLSDAD 407
            KR+RL WTP LH  F+AAV++LG+D AVP SI++ M VEGL+RENVASHLQK+R +LK++K  +E  E L+   G  +      +    D+D
Sbjct:   72 KRARLVWTPALHAQFVAAVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKRKKFSSESTEGLDDTDGDTRSMRKKNKAEAGDSD 163          
BLAST of Ggra5193.t1 vs. uniprot
Match: A9RTK9 (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RTK9_PHYPA)

HSP 1 Score: 81.6 bits (200), Expect = 3.620e-14
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 0
Query:  306 GLSNETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            GL N  +   KR+RL WTP+LHK F+ AV  LGI NAVP +I++ M VEGL+RENVASHLQK+R  LK+
Sbjct:  121 GLMNSNDEPLKRARLVWTPQLHKRFVEAVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR 189          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A7S0IIQ9 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IIQ9_MICPS)

HSP 1 Score: 78.6 bits (192), Expect = 4.300e-14
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0
Query:  296 RSRGSKRFSDGLSNETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            RSR     S G  ++     KR RL WTP LHK F+ AV  LGI NAVP +I++ M VEGL+RENVASHLQK+R  LK+
Sbjct:    8 RSRSLPELSTGSEDDQAHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR 86          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A7J7PME6 (Homeodomain-like protein (Fragment) n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PME6_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 5.160e-14
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0
Query:  317 RSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            ++RL WTP LH  FLAAV QLGI NAVP +I+R MGV G++RENVASHLQK+R  LK+
Sbjct:   29 KARLIWTPALHARFLAAVQQLGIANAVPKTILRMMGVGGMTRENVASHLQKYRLYLKR 86          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A162AS65 (HTH myb-type domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162AS65_DAUCS)

HSP 1 Score: 80.5 bits (197), Expect = 1.540e-13
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
Query:  310 ETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            ETE  +KR+RL WTP+LHK F+  V  LGI NAVP  I+  M VEGLSRENVASHLQK+R  LK+
Sbjct:  117 ETEVATKRARLVWTPQLHKRFVEVVAHLGIKNAVPKRIMEMMNVEGLSRENVASHLQKYRLYLKR 181          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A834SI56 (Transcription factor PCL1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SI56_9FABA)

HSP 1 Score: 80.9 bits (198), Expect = 3.060e-13
Identity = 54/122 (44.26%), Postives = 71/122 (58.20%), Query Frame = 0
Query:  261 DIRDTSHHRM-------SFPDASHLNETSMKTTDYANSDRTPRSRGSKRFSDGLSNETEGRS-KRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            DIRD  HH++       S P  S  N T   + D+A+S              G + +   R+ KR RL WTP+LHK F+ AV  LGI NAVP +I++ M V+GL+RENVASHLQK+R  LK+
Sbjct:   39 DIRDPHHHQIPQPPPPSSNPLPSPSNPTQPNSADFADSAE---------LGSGTAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKR 151          
BLAST of Ggra5193.t1 vs. uniprot
Match: A0A3Q7ILT0 (HTH myb-type domain-containing protein n=4 Tax=Solanum TaxID=4107 RepID=A0A3Q7ILT0_SOLLC)

HSP 1 Score: 80.1 bits (196), Expect = 3.190e-13
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 0
Query:  304 SDGLSNETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIREMGVEGLSRENVASHLQKHRSSLKK 374
            S G+ +E     KR RL WTP+LHK F+ AV QLGI NAVP +I++ M V+GL+RENVASHLQK+R  LK+
Sbjct:   75 SSGVGDEPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKR 145          
The following BLAST results are available for this feature:
BLAST of Ggra5193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6D28.190e-12449.89Transcription factor BOA n=1 Tax=Gracilariopsis ch... [more]
A0A7R9TMS04.750e-1659.74Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1N0L85.230e-1559.74G2-like myb-family transcription factor n=2 Tax=Mi... [more]
A0A090MAV96.400e-1550.00Myb domain, plants n=2 Tax=Ostreococcus tauri TaxI... [more]
A9RTK93.620e-1460.87Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A7S0IIQ94.300e-1455.70Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7J7PME65.160e-1467.24Homeodomain-like protein (Fragment) n=2 Tax=Scened... [more]
A0A162AS651.540e-1364.62HTH myb-type domain-containing protein n=1 Tax=Dau... [more]
A0A834SI563.060e-1344.26Transcription factor PCL1 n=1 Tax=Senna tora TaxID... [more]
A0A3Q7ILT03.190e-1359.15HTH myb-type domain-containing protein n=4 Tax=Sol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..385
NoneNo IPR availableGENE3D1.10.10.60coord: 314..375
e-value: 1.9E-25
score: 90.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..229
NoneNo IPR availablePANTHERPTHR31442:SF21HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 162..444
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 321..368
e-value: 2.6E-6
score: 27.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 314..373
score: 12.439528
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 318..370
e-value: 2.7E-20
score: 70.4
IPR044841Transcription factor LUX/BOA-likePANTHERPTHR31442HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 162..444
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 315..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:725799..727181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5193.t1Ggra5193.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 725799..727181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5193.t1 ID=Ggra5193.t1|Name=Ggra5193.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=461bp
MNQEQQHPSHYAAHQAQHQRPAEPSYPSTWTSHQPQRYESAHPTSTALAV
VTMNVYAVPCAYTVNNEPLYLQFGTHSAADAAQSASVLGQRYWHLKTQQT
PRDDYAYSPATVNRPNRTYDPAQAPANERYEPYESGSAPRPQPTYEYPPG
DALARAREFNSAAPRSIGHEMQQQQPPQPQRVYPEPEIARSVVPDIPRPS
PVVVSKDDFSEQHAGSVPHATQVNRSANYEAEDRCSDRSGRDPGADRSVP
KEQSSHHESNDIRDTSHHRMSFPDASHLNETSMKTTDYANSDRTPRSRGS
KRFSDGLSNETEGRSKRSRLHWTPELHKSFLAAVDQLGIDNAVPTSIIRE
MGVEGLSRENVASHLQKHRSSLKKEKEEAEKKELLETLKGFMQCDPSNPR
KNLSDADVLKEAAARQRVRKQDNTINLQGSMKADSPHVAMNRTSAKERRE
HTKASNRGHP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR044841LUX/BOA-like
IPR009057Homeobox-like_sf