Ggra5188.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5188.t1
Unique NameGgra5188.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Homology
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A2V3J6E0 (Cell division control protein 42-like n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3J6E0_9FLOR)

HSP 1 Score: 348 bits (892), Expect = 1.960e-120
Identity = 166/179 (92.74%), Postives = 171/179 (95.53%), Query Frame = 0
Query:   37 MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPSACCTIA 215
            MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVH PSLEN+ERRWAPEIKRV PGSHMILCGCKMDLRHDPVE+ERLRQR  AP+T  EGE V++NIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAP ACCTIA
Sbjct:    1 MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHHPSLENVERRWAPEIKRVCPGSHMILCGCKMDLRHDPVEVERLRQRGQAPVTTAEGETVARNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPGACCTIA 179          
BLAST of Ggra5188.t1 vs. uniprot
Match: M2X0X3 (Cell division control protein 42 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X0X3_GALSU)

HSP 1 Score: 221 bits (564), Expect = 3.200e-70
Identity = 109/194 (56.19%), Postives = 142/194 (73.20%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPSACCTIA 215
            +K V+VGDG+VGKTCM+ SY  N+FPTDYVPTVFD +TATV VD  P  +EL DTAGQEDY+RLRALSY +TDVFILC+S+V+ PS EN+E +W PE++R SPG  +IL G K+DL +DP E+ +L +R  +P+  E G+++S  IG   + ECSA TQ GLK+VFDEA+ +A  P        S   ACC+I+
Sbjct:    7 IKIVVVGDGAVGKTCMLMSYTTNRFPTDYVPTVFDNYTATVMVDDEPVQIELWDTAGQEDYQRLRALSYFQTDVFILCFSLVNPPSFENVESKWIPELQRNSPGVPIILAGTKLDLVNDPQELSKLSKRGQSPIAVEMGKQLSSKIGG-VYRECSAFTQAGLKEVFDEAIRAALAPKLSNSVYTSTNQACCSIS 199          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A162UHE7 (Uncharacterized protein n=3 Tax=Mucorales TaxID=4827 RepID=A0A162UHE7_PHYB8)

HSP 1 Score: 216 bits (551), Expect = 2.390e-68
Identity = 103/193 (53.37%), Postives = 139/193 (72.02%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPSACCTI 214
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN++ +W PEI   +P + MIL G K+DLR DP  I +LRQ+  AP+T  +  +++K+IGA  + ECSALTQ+GLK+VFDEA+ +   P P P+R        CTI
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVKTKWYPEISHHAPNTPMILVGTKLDLREDPETIAKLRQKHMAPITYSQSLQMAKDIGAVKYLECSALTQKGLKNVFDEAIRAVLCPAPPPKRQKK-----CTI 191          
BLAST of Ggra5188.t1 vs. uniprot
Match: G4T953 (Related to Rac1 GTP binding protein n=2 Tax=Serendipita TaxID=358905 RepID=G4T953_SERID)

HSP 1 Score: 216 bits (550), Expect = 3.740e-68
Identity = 101/181 (55.80%), Postives = 134/181 (74.03%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 202
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD +TA V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +PG   +L G K+DLR DP  IE+LR+R+ AP+T ++G  + K IGA  F ECSALTQ+GLK+VFDEA+ +   P  KP+
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYTAQVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRSKWYPEINHHAPGVPKLLVGTKLDLREDPASIEKLRERRMAPVTYQQGVSMHKEIGATKFLECSALTQKGLKNVFDEAIRAVLYPTAKPK 185          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A6T6BWC2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BWC2_9RHOD)

HSP 1 Score: 214 bits (545), Expect = 3.170e-67
Identity = 98/171 (57.31%), Postives = 134/171 (78.36%), Query Frame = 0
Query:   21 RVKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEAL 191
            +VK V+VGDGSVGKTCM++SYA N+FPT+YVPTVFDT+TA+V +      LE+ DTAGQ+DY+RLRAL+Y  T+V +LCYS+V + S EN+  +WAPE++   P + +ILCG K DLR DPV +E+L+++   P++  +GER+   +GA +F ECSALT+EGLKDVFDEA+
Sbjct:    7 KVKIVIVGDGSVGKTCMLHSYARNEFPTEYVPTVFDTYTASVRISEDLVGLEIWDTAGQDDYDRLRALTYFNTNVIVLCYSVVSKASFENVLNKWAPEVQFRCPDAAVILCGTKTDLRTDPVTLEKLKKKGHYPISTLQGERMQTKVGASAFMECSALTKEGLKDVFDEAI 177          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A165IZP5 (Rac1 GTP binding protein n=2 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A165IZP5_EXIGL)

HSP 1 Score: 213 bits (543), Expect = 4.040e-67
Identity = 97/181 (53.59%), Postives = 137/181 (75.69%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 202
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P +  +L G K+DLR DP  IE+LR+R+ +P++ ++G  ++K+IGA  + ECSALTQ+GLK VFDEA+ +  +P PKP+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSYENVRTKWHPEISHHAPSTATLLVGTKLDLREDPQTIEKLRERRMSPISYQQGVSMAKDIGAAKYLECSALTQKGLKTVFDEAIRAVLNPQPKPK 184          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A075APZ8 (Ras-related C3 botulinum toxin substrate 1 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075APZ8_ROZAC)

HSP 1 Score: 212 bits (540), Expect = 1.120e-66
Identity = 99/182 (54.40%), Postives = 134/182 (73.63%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRR 203
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVFI+C+SIV  PS EN+  +W PEI   +P + +IL G K+DLR D   +E+LR+++ +P+T  +G+++ K IGA  + ECSALTQ+GLK VFDEA+ +   P PK  R
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFIICFSIVSPPSFENVRSKWYPEISHHAPHTPIILVGTKLDLREDKDTLEKLREKRTSPITYFQGDQLRKEIGAVKYLECSALTQKGLKQVFDEAIRAVLSPQPKESR 185          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A0C9VLL5 (Unplaced genomic scaffold SPHSTscaffold_85, whole genome shotgun sequence n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VLL5_SPHS4)

HSP 1 Score: 212 bits (540), Expect = 1.190e-66
Identity = 98/180 (54.44%), Postives = 135/180 (75.00%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKP 201
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P + ++L G K+DLR DP  IE+LR+R+ AP++ + G ++ K+IGA  + ECSALTQ+GLK VFD+A+ S   P PKP
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSYENVRSKWYPEISHHAPNTAILLVGTKLDLREDPATIEKLRERRMAPISYQLGLQMQKDIGAVKYLECSALTQKGLKTVFDDAIRSVLSPPPKP 183          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A0K6GAW4 (Hypothetical protein n=7 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6GAW4_9AGAM)

HSP 1 Score: 212 bits (539), Expect = 2.120e-66
Identity = 97/185 (52.43%), Postives = 137/185 (74.05%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSAS 206
            +K V+VGDG+VGKTC++ SY  N FP +Y+PTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P + ++L G K+DLR DPV  ++LR+R+ AP++  +G +++K+IGA  + ECSALTQ+GLK VFDEA+ S   P P+  +  S
Sbjct:   11 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRTKWWPEISHHAPSTSLVLVGTKLDLRDDPVTTDKLRERRMAPISYPQGVQMAKDIGAVKYLECSALTQKGLKTVFDEAIRSVLSPAPRQPKKKS 195          
BLAST of Ggra5188.t1 vs. uniprot
Match: A0A493TYA2 (Cell division control protein 42 homolog n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=A0A493TYA2_ANAPP)

HSP 1 Score: 213 bits (541), Expect = 2.590e-66
Identity = 98/190 (51.58%), Postives = 140/190 (73.68%), Query Frame = 0
Query:   22 VKTVLVGDGSVGKTCMVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQRQDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPSAC 211
            +K V+VGDG+VGKTC++ SY  NKFP++YVPTVFD +  TV + G P TL L DTAGQEDY+RLR LSY +TDVF++C+S+V   S EN++ +W PEI    P +  +L G ++DLR DP  IE+L + +  P+T E  E++++++ A  + ECSALTQ+GLK+VFDEA+L+A +P P+P+++ S P  C
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP-PEPKKTRSIPMMC 192          
The following BLAST results are available for this feature:
BLAST of Ggra5188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6E01.960e-12092.74Cell division control protein 42-like n=2 Tax=Rhod... [more]
M2X0X33.200e-7056.19Cell division control protein 42 n=1 Tax=Galdieria... [more]
A0A162UHE72.390e-6853.37Uncharacterized protein n=3 Tax=Mucorales TaxID=48... [more]
G4T9533.740e-6855.80Related to Rac1 GTP binding protein n=2 Tax=Serend... [more]
A0A6T6BWC23.170e-6757.31Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A165IZP54.040e-6753.59Rac1 GTP binding protein n=2 Tax=Agaricomycetes in... [more]
A0A075APZ81.120e-6654.40Ras-related C3 botulinum toxin substrate 1 n=1 Tax... [more]
A0A0C9VLL51.190e-6654.44Unplaced genomic scaffold SPHSTscaffold_85, whole ... [more]
A0A0K6GAW42.120e-6652.43Hypothetical protein n=7 Tax=Rhizoctonia solani Ta... [more]
A0A493TYA22.590e-6651.58Cell division control protein 42 homolog n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 62..84
score: 43.98
coord: 124..137
score: 38.28
coord: 45..61
score: 30.66
coord: 172..194
score: 30.95
coord: 22..43
score: 40.73
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 22..197
e-value: 3.0E-12
score: 43.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 19..197
e-value: 1.7E-19
score: 80.8
NoneNo IPR availablePANTHERPTHR24072:SF17RHO-RELATED GTP-BINDING PROTEIN RHOJcoord: 19..214
NoneNo IPR availablePROSITEPS51420RHOcoord: 15..194
score: 21.16107
NoneNo IPR availablePROSITEPS51419RABcoord: 16..215
score: 16.179497
NoneNo IPR availableCDDcd00157Rhocoord: 22..190
e-value: 4.15327E-94
score: 270.569
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 24..197
e-value: 2.2E-84
score: 296.3
IPR001806Small GTPasePFAMPF00071Rascoord: 23..191
e-value: 4.1E-46
score: 156.5
IPR001806Small GTPasePROSITEPS51421RAScoord: 10..215
score: 15.014747
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 19..199
e-value: 5.2E-61
score: 207.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..190
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 22..164
e-value: 4.5E-30
score: 102.6
IPR003578Small GTPase RhoPANTHERPTHR24072RHO FAMILY GTPASEcoord: 19..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:709922..710569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5188.t1Ggra5188.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 709922..710569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5188.t1 ID=Ggra5188.t1|Name=Ggra5188.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MARGGYSAGPQQNDNNNDFVRVKTVLVGDGSVGKTCMVYSYAENKFPTDY
VPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCY
SIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEIERLRQR
QDAPLTREEGERVSKNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPK
PRRSASAPSACCTIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho