Ggra5140.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5140.t1
Unique NameGgra5140.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length488
Homology
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BLAST of Ggra5140.t1 vs. uniprot
Match: A0A2V3IEN1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEN1_9FLOR)

HSP 1 Score: 378 bits (971), Expect = 2.490e-124
Identity = 213/465 (45.81%), Postives = 285/465 (61.29%), Query Frame = 0 
Query:   25 VAGEAVRFASDLLHPAPAPLPPPLRSARANVPTDVRVTAQQSLPDISVPPTLLPFDVVRRLVPRLFTLDNDPLLDVDEEVQMRDGPCPPVECELLNSEFNRSVLMHVLYGFSFQTVPHLMSSLRQTVTDHQVDKDKRNHNDDENELEQNKPTAAGEQEGINNKSAPPKRMTAANWFNAWAKDAALMQRNLISFNLAAISNLLNLPSTWTFTLHLHSSPYFGYAGLEARVVLFSPHFKFLSFHLLGISDPHTDLPSLVLLLETLCPDVHRKLMGVQIHLTPTEHHNMTGASASRVLAALYKLAPRKPLFFTPDVHRALPHPPLLPHQLAALTSEQMKQLVDQYKLRMQLSWSQQQIQQVLDDHAVLSQSTTLQDAPQN--ASDVSFEQSWAFAEDRFRQLRLFVGGLATASAYKSPKSERVSVTALELCSANAAQVTVVADIILQARQFLQLRPFVLPEFYKAMSD 487
            +A  A+R   +LL P P  LP PL + R+ VPTD R+     LPDISV  T +PF +  RLVPRLFT+ NDPL     E+     P     C + NS+FNR VL+H LYGFSFQT P +M +L Q   D +V + +  H                                    F+ W  DAA +QR+++S NL A+SNLLNLP+TWTFTL L SSPY+G+AGLEAR+VLFSP  ++ SFHLLGIS PH D+P+L+LLL+TLCP +H+KLMGV IHL+  EH+ + G  ASRVL+   + +PR+P FFTP VH  LP P + P  +AAL  +  + LV++Y+ R++  W+  QI+Q+L  H+      T+Q    N  AS +S  Q WA AE RF  L  F+GGL ++  YK   + RVS+TALE+   +A+ +T  ADIIL ARQF+ LRPF+  +  KAM++
Sbjct:    1 MAPPAIRMRDELLVPLPPSLPAPLLALRSTVPTDTRLPVLPPLPDISVASTDVPFAIYHRLVPRLFTIPNDPLQQQPCELFSAQHPAHTHSCTVANSDFNRVVLLHALYGFSFQTTPQVMFTLHQATEDDRVTEQQTPH----------------------------------KIFSRWKLDAAYLQRHILSLNLLAMSNLLNLPTTWTFTLTLQSSPYYGHAGLEARIVLFSPQLEYASFHLLGISRPHIDIPNLLLLLQTLCPQLHQKLMGVNIHLSDAEHNALPGVIASRVLSTFLRRSPRRPRFFTPQVHCQLPGPNVNPLAIAALAPDHFRSLVNEYRPRLESFWTSNQIEQILLQHSQFR--NTVQHLLNNPTASKLSLAQQWALAERRFASLFYFIGGLGSSFDYKPTPTPRVSITALEITPESASAMTTAADIILHARQFVHLRPFISWDACKAMAE 429
The following BLAST results are available for this feature:
BLAST of Ggra5140.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEN12.490e-12445.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:576013..577476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5140.t1Ggra5140.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 576013..577476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5140.t1 ID=Ggra5140.t1|Name=Ggra5140.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=488bp
MLRFTPPRAVAFVCGRAHDGLMAWVAGEAVRFASDLLHPAPAPLPPPLRS
ARANVPTDVRVTAQQSLPDISVPPTLLPFDVVRRLVPRLFTLDNDPLLDV
DEEVQMRDGPCPPVECELLNSEFNRSVLMHVLYGFSFQTVPHLMSSLRQT
VTDHQVDKDKRNHNDDENELEQNKPTAAGEQEGINNKSAPPKRMTAANWF
NAWAKDAALMQRNLISFNLAAISNLLNLPSTWTFTLHLHSSPYFGYAGLE
ARVVLFSPHFKFLSFHLLGISDPHTDLPSLVLLLETLCPDVHRKLMGVQI
HLTPTEHHNMTGASASRVLAALYKLAPRKPLFFTPDVHRALPHPPLLPHQ
LAALTSEQMKQLVDQYKLRMQLSWSQQQIQQVLDDHAVLSQSTTLQDAPQ
NASDVSFEQSWAFAEDRFRQLRLFVGGLATASAYKSPKSERVSVTALELC
SANAAQVTVVADIILQARQFLQLRPFVLPEFYKAMSD*
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