Ggra5121.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5121.t1
Unique NameGgra5121.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length377
Homology
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BLAST of Ggra5121.t1 vs. uniprot
Match: A0A2V3J7G5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7G5_9FLOR)

HSP 1 Score: 325 bits (834), Expect = 6.890e-106
Identity = 199/374 (53.21%), Postives = 257/374 (68.72%), Query Frame = 0 
Query:    1 MVRYLKNWTEKIDDQNALDRFVAVELLLARLHFPISVCFALGVLAQTGLVPYIAPHEWRLVLVASFFLTLANGRDLNHCIRHFYQIQSSEDDFSQSLLDLDAKDEVSSAWGQMQMLAAFSLTLGSVSLLNSSIIALIRDNAVSQVVSRRQYAASFALFLIGSGANGVLSSGRTQSLESFRILISFQNLLASATLCTASVLLLPDIGVEESMSPFQTSLLTILSSVGCIMLVMSSIVNYFHTLGYCTL---HYEGYNLLLERRKSQIG-KSKRMAAWETVKGLLWARKGTWWKRRKSN-RKRARYAISNTSLEHSIDEENQADDEGG-----SESSNY----SSSMTSRSTSSES---FSTIYDEEAGSRTSFAS 357
            MVR+L++  E ID++ +LD FVA E++LARLHFPI+VCF++G+LAQTGLVPY APHEW+ VL+AS FLTLANGRDLNHCIR  +Q +  E+D   SL  L   ++  SA G MQ+L+AF+LTLGSVSLLN+SII + RD+  S  + RRQ+A+SFALFLIGSGAN +  + + Q LE  RIL+ FQN+LASATL  ASVL+LP IG E++ S FQ SL + LS +G I+L+MSSIVNYF+T+ YCT    + E + L     K+++G K +R+  WE VK L W+ +  WWKRRK   RKR R   SN  ++          D GG     SESS +    SSS+ SRS SS S   FS++YDEE G  +S  S
Sbjct:    1 MVRFLRSCFEIIDNKKSLDWFVASEIMLARLHFPIAVCFSIGILAQTGLVPYAAPHEWKFVLIASLFLTLANGRDLNHCIRALFQTEPREEDAVTSL-GLTTWNDSGSAGGHMQLLSAFALTLGSVSLLNASIIGIARDSEGSSNICRRQFASSFALFLIGSGANNIPVNKKAQRLECTRILVGFQNILASATLSVASVLMLPGIGGEKTTSSFQLSLTSALSGIGSILLIMSSIVNYFYTVAYCTRQCEYLESFCLAHAHEKAEVGAKRRRLMTWERVKSLFWSGRSNWWKRRKPVVRKRLRRNASNNRIDQY--------DPGGTRIILSESSEFEMDSSSSLLSRSASSSSYSSFSSLYDEEQGRESSDGS 365
The following BLAST results are available for this feature:
BLAST of Ggra5121.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J7G56.890e-10653.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..376
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 240..376
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 203..213
NoneNo IPR availableTMHMMTMhelixcoord: 152..169
NoneNo IPR availableTMHMMTMhelixcoord: 218..240
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 181..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:524117..525247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5121.t1Ggra5121.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 524117..525247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5121.t1 ID=Ggra5121.t1|Name=Ggra5121.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=377bp
MVRYLKNWTEKIDDQNALDRFVAVELLLARLHFPISVCFALGVLAQTGLV
PYIAPHEWRLVLVASFFLTLANGRDLNHCIRHFYQIQSSEDDFSQSLLDL
DAKDEVSSAWGQMQMLAAFSLTLGSVSLLNSSIIALIRDNAVSQVVSRRQ
YAASFALFLIGSGANGVLSSGRTQSLESFRILISFQNLLASATLCTASVL
LLPDIGVEESMSPFQTSLLTILSSVGCIMLVMSSIVNYFHTLGYCTLHYE
GYNLLLERRKSQIGKSKRMAAWETVKGLLWARKGTWWKRRKSNRKRARYA
ISNTSLEHSIDEENQADDEGGSESSNYSSSMTSRSTSSESFSTIYDEEAG
SRTSFASGDSQDEEPNETRERKRGDP*
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