Ggra511.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra511.t1
Unique NameGgra511.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
BLAST of Ggra511.t1 vs. uniprot
Match: A0A2V3J0S4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0S4_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 5.890e-51
Identity = 107/202 (52.97%), Postives = 128/202 (63.37%), Query Frame = 0
Query:  120 MDDENSPPLRPPARPQLPLLLPSERIPLAPPHIDHNASTPSAYESPTPPTSPSTDYPYGAVARVVPPSP----------------------------DADGYRERPQRESTQRRRQRIADTTILGVAIFVVTGVVFLVMDTGFTAMVTNENSPRLQIFSAWPDGGVISLEYGCHAPDGVPISIPLCWQDVALSATNLVTLYA 293
            M DE + PLRP   P+ PLL PSERIPLAP H DHNASTPSAYESP+PPTSPST+YPYGAVARVVP S                              AD Y +  + E + R RQR+ DT ILG  I  +T +V ++M +G   MV N NS +L+IFS WPDGGVI L+YGCHA    PISIPL W++V  SATNL+ L++
Sbjct:    1 MADEQTVPLRP--VPRSPLLSPSERIPLAPAHTDHNASTPSAYESPSPPTSPSTEYPYGAVARVVPDSYVTQNRRLNGLADPQQTVHLITDSSASEYSADRYVDHTRLEIS-RLRQRLMDTYILGAVIVAITTIVSVIMASGLATMVANRNSAKLEIFSDWPDGGVIPLKYGCHAHGHHPISIPLRWENVPASATNLIVLFS 199          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A2V3J0R0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R0_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 8.170e-47
Identity = 84/112 (75.00%), Postives = 94/112 (83.93%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGRK 112
            +VGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLC+ TAA+TF LY+   P   REESA+EF +DT+GV AFCVIGA+NGVRARVP  V  LC  ATATFGG VRD+L GR+
Sbjct:   88 LVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCLLTAATTFVLYSRNPPDQQREESALEFASDTVGVAAFCVIGAINGVRARVPALVTTLCGTATATFGGVVRDLLVGRE 199          
BLAST of Ggra511.t1 vs. uniprot
Match: R7Q7M5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M5_CHOCR)

HSP 1 Score: 145 bits (366), Expect = 2.780e-38
Identity = 75/112 (66.96%), Postives = 84/112 (75.00%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGRK 112
            +VGTITAVGGGTIRDAVIL  RPFWTEE EYLYLC+  +  TFA++    PR   + SA+ FV D+ GV AF VIGA NGVRA VP  V V+C MATATFGG VRDVLC RK
Sbjct:   92 VVGTITAVGGGTIRDAVILNARPFWTEEPEYLYLCLLASGLTFAMW----PREKEDNSALHFVTDSAGVAAFAVIGAQNGVRAGVPAIVSVVCGMATATFGGAVRDVLCNRK 199          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A836CDZ5 (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.130e-28
Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITAVGGGT+RD ++     FW  E EYLY+C+A A  TF  Y+A A +    +S +   AD +GVGAFCVIGA N VR R+  A+ V C M TATFGG +RDVLC R
Sbjct:   68 IVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQR 178          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A7S0IDQ1 (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDQ1_MICPS)

HSP 1 Score: 117 bits (294), Expect = 1.080e-26
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVI-LAKRPFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFV--ADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITAVGGGT+RD ++   +R FW EE+EYL++C+ T  +TF  +     RA   +   E+V  AD IGVGAFCVIGAMNG+RA VP A  V C M TATFGG +RDVL  R
Sbjct:  166 IVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICVGTGVATFLAWPHL-ERACGVKDTDEWVDWADAIGVGAFCVIGAMNGIRAGVPCAAAVACGMFTATFGGVIRDVLMSR 278          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A830HNH6 (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HNH6_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 1.600e-26
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRP-FWTEEVEYLYLCIATAASTFALYAACAPRAAREE-----SAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITAVGGGT+RD ++  + P FW  E EYLY+CIAT A+TF L+    P  ++ +      AV    D +G+GAFCVIGA NGVRA VP+    +C MATATFGG +RD LC R
Sbjct:  210 IVGTITAVGGGTVRDFLLGVRGPCFWMAEAEYLYMCIATTAATFFLW----PNISQSQMNPTAEAVIETGDFLGLGAFCVIGAHNGVRAGVPLVAAAICGMATATFGGVIRDTLCKR 322          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A6G0WP54 (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP54_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.440e-24
Identity = 62/124 (50.00%), Postives = 74/124 (59.68%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAP-------------RAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITA GGGT+RDA++L K PFW EE EYL L  A AA TF L+   +P              A   E  +    D IG+GAF VIGAMNG+RA+ P+ V  +C M TATFGG  RD L  R
Sbjct:   90 LVGTITATGGGTLRDALVLNKSPFWVEEWEYLVLSAAAAAGTFYLWGQLSPGKEIIEGSGMTLKSADGGEGTLLDWGDAIGIGAFAVIGAMNGIRAQCPLLVSSICGMMTATFGGMTRDTLLNR 213          
BLAST of Ggra511.t1 vs. uniprot
Match: C1MVB5 (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MVB5_MICPC)

HSP 1 Score: 112 bits (279), Expect = 1.760e-24
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVI-LAKRPFWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVA-DTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITAVGGGT+RD ++   +R FW EE+EYL++C+ T   TF  +         +ES     A D IGVGAFCVIGA NG+RA VP+  V+ C M TATFGG +RDVL  R
Sbjct:  189 VVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICLGTGVLTFLSWPTLRREFGVDESDWWVEAWDAIGVGAFCVIGAQNGIRAGVPLPAVIACGMFTATFGGVIRDVLMSR 301          
BLAST of Ggra511.t1 vs. uniprot
Match: D8LE41 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.780e-24
Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRP-FWTEEVEYLYLCIATAASTFALYAACAPRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITA GGGT+RD V+L   P FW  E EYL++C+AT    F L++  A R  R++ A+    D +GVGAFC IGA  GVR  +   V V C M T+TFGG +RDVLC R
Sbjct:  116 IVGTITATGGGTVRD-VLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSR 226          
BLAST of Ggra511.t1 vs. uniprot
Match: A0A6A4Y8W7 (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y8W7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.770e-24
Identity = 61/123 (49.59%), Postives = 72/123 (58.54%), Query Frame = 0
Query:    1 MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACAP------------RAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATFGGGVRDVLCGR 111
            +VGTITAVGGGT+ DA++L K+PFW +E EYL L  A AA  F  +    P             A   E  +    D IGVGAF VIGAMNG+RA+ PI V  +C M TATFGG  RD L  R
Sbjct:   30 LVGTITAVGGGTLHDALVLGKQPFWVDECEYLVLSAAAAAVAFYAWGELEPGQDILAPGVTLKAADGGEGTLMDWGDAIGVGAFAVIGAMNGIRAQCPIFVSAMCGMMTATFGGLTRDTLLHR 152          
The following BLAST results are available for this feature:
BLAST of Ggra511.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0S45.890e-5152.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0R08.170e-4775.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7M52.780e-3866.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A836CDZ55.130e-2854.95UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S0IDQ11.080e-2656.14Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
A0A830HNH61.600e-2653.85Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A6G0WP541.440e-2450.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
C1MVB51.760e-2453.10Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
D8LE415.780e-2451.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A4Y8W76.770e-2449.59Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005115Glycine transporterPFAMPF03458Gly_transportercoord: 63..111
e-value: 1.9E-12
score: 46.8
coord: 1..46
e-value: 7.4E-9
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..207
NoneNo IPR availablePANTHERPTHR30506:SF3UPF0126 INNER MEMBRANE PROTEIN YADScoord: 1..112
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 1..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 85..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000238_piloncontigtig00000238_pilon:118518..119897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra511.t1Ggra511.t1Gracilaria gracilis GNS1m malemRNAtig00000238_pilon 118518..119897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra511.t1 ID=Ggra511.t1|Name=Ggra511.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MVGTITAVGGGTIRDAVILAKRPFWTEEVEYLYLCIATAASTFALYAACA
PRAAREESAVEFVADTIGVGAFCVIGAMNGVRARVPIAVVVLCDMATATF
GGGVRDVLCGRKSSSSAVAMDDENSPPLRPPARPQLPLLLPSERIPLAPP
HIDHNASTPSAYESPTPPTSPSTDYPYGAVARVVPPSPDADGYRERPQRE
STQRRRQRIADTTILGVAIFVVTGVVFLVMDTGFTAMVTNENSPRLQIFS
AWPDGGVISLEYGCHAPDGVPISIPLCWQDVALSATNLVTLYATSTFRIV
YTPSDI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005115Gly_transporter