Ggra5093.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5093.t1
Unique NameGgra5093.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length562
Homology
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A2V3J975 (Nucleoporin GLE2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J975_9FLOR)

HSP 1 Score: 494 bits (1273), Expect = 8.590e-169
Identity = 233/310 (75.16%), Postives = 265/310 (85.48%), Query Frame = 0
Query:   18 LPDP--PDDTVSRLRFSSTNAPFLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINSFATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSSGRTNMEST 325
            LP P  PDDT+SRLRFS T+ PFLAASSWNGT RVWKVDPA GNATAVSL  +S P+LDL+WLSD  TI+YAG    A+RWDLA+   E+VAAH+  IRCT +VS++NSFATAGWD  LRYWD+RSPTG PLL V+L ERAYAMDARGPLMVLALADRKIAIYDVRKP+  Y+ER+TQL+YQTRCIA WPD+MGYNVG VEGKV VE VQ SK  Q+YSFFCH+DKQG   +VNAIRFH QS AFCTA +DGM+HFWDKDR+DRA MRRFQKMGQ +CD+DFSSDG+M AYAVGYDW+QGS+GR+NMEST
Sbjct:   84 LPTPGSPDDTISRLRFSPTSTPFLAASSWNGTTRVWKVDPAAGNATAVSLQTESTPVLDLTWLSDGGTIVYAGVGKLAYRWDLASERKEIVAAHNEPIRCTCEVSTVNSFATAGWDKRLRYWDIRSPTGNPLLDVQLSERAYAMDARGPLMVLALADRKIAIYDVRKPNAPYVERFTQLRYQTRCIATWPDSMGYNVGSVEGKVGVEYVQPSKVDQSYSFFCHRDKQGNSKAVNAIRFHQQSGAFCTASNDGMVHFWDKDRRDRAPMRRFQKMGQAVCDVDFSSDGNMLAYAVGYDWIQGSAGRSNMEST 393          
BLAST of Ggra5093.t1 vs. uniprot
Match: R7QHN8 (WD40 repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHN8_CHOCR)

HSP 1 Score: 370 bits (950), Expect = 4.240e-121
Identity = 179/327 (54.74%), Postives = 230/327 (70.34%), Query Frame = 0
Query:    6 SNAPANPNNGYLLPDPPDDTVSRLRFS--STNAPFLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINSFATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMS-SVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSSGR-TNMESTKLL 328
            S A  NPNNGY++P PPDDTVSRLRFS  ST   +L ASSWNG+VR WKV+P  G A AVS+T   AP+LD +W +D ST+   GAS   + WDLATG T +VAAHD  +    DV      AT  WD  LRYWDVR+PTG+P+ SV L +RAYAMD + P +V+ LADRK+ ++DVRKP+  + E+YT  KYQTRC++ WPD MGY VG V+G+VSV+ VQ+ +   + SF CH+DK   +  +++AIRFH  S  F TA SDG   FWDKDRK+RA  RRF+KM  P+ D+DF++DG  YAYAVGYDW +G+SG  T+ + T ++
Sbjct:    6 SGAANNPNNGYVVPQPPDDTVSRLRFSPASTGDIYLIASSWNGSVRCWKVNPNQGLAVAVSMTEQGAPVLDCAWAADGSTVYCGGASKIVNSWDLATGATTIVAAHDEPVTQVCDVEEKKLLATTSWDKTLRYWDVRAPTGSPVGSVPLADRAYAMDVKEPTVVVGLADRKLVVFDVRKPATPFKEKYTLHKYQTRCVSIWPDRMGYLVGSVDGRVSVDYVQELEPGASTSFSCHRDKANRVGYAIHAIRFHKPSGMFATAASDGRFSFWDKDRKERARTRRFEKMNGPVTDIDFAADGKTYAYAVGYDWTKGASGNVTSPDQTYII 332          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A5J4YY25 (Protein RAE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY25_PORPP)

HSP 1 Score: 291 bits (746), Expect = 1.430e-90
Identity = 150/321 (46.73%), Postives = 205/321 (63.86%), Query Frame = 0
Query:    5 VSNAPANPNNGYLLPDPPDDTVSRLRFSSTN-AP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHD---NSIRCTHDVSS-INSFATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSSG 318
               A  NPNN  L+ +PP+D +S L FS    AP  FL A SW+  VR W+V  + G    V +   SAP+LD++W  D   I  AG   +A  W +AT   +V+A HD   + I   +DV +      T  WD  L+YWD+R+PTG+P+  V +PER YAMDARG L+V+  ADRKI +YDVRKP++ YL++ +QLKYQTR IA +PD  G+ VG VEG+VS+++VQ S    +++F CH++ +  + SVN+I FH     F TAGS+G   FWDKD K R  ++ F+K+ QPI    FS+DGS+YAYAVGYDW +G+ G
Sbjct:    8 TGTAADNPNNDILVSNPPNDGISSLAFSPRALAPKNFLVAGSWDNGVRCWEVQQS-GQTVPVGMIEHSAPVLDVTWREDGQAIFSAGCDKQAKMWSIATNQNQVIAQHDAPISKIAYLNDVGNGTPCVVTGSWDKTLKYWDIRAPTGSPMGVVPMPERVYAMDARGALLVVGTADRKILVYDVRKPTQPYLDKLSQLKYQTRVIACFPDQRGFAVGSVEGRVSIDHVQQSDRPNDFAFKCHRE-ENNIYSVNSIAFHEGYGTFATAGSNGTFIFWDKDSKQR--LKNFKKLLQPITASCFSADGSIYAYAVGYDWSKGAEG 324          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A2V3J6U5 (GARS_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U5_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 1.630e-89
Identity = 139/186 (74.73%), Postives = 155/186 (83.33%), Query Frame = 0
Query:  376 DVKAYSIADTLRDSPHLNSTLLTAMRDYFGDDGREVQDYMKRPRTADGEPMFRCVIVGSGGRELQLAKTLCDSGVISGLYYCPDHDVACDIEMNKYAQSTTVSAEKRPKDAVRFAKWCVADAVFIGPDRQQHISREEEVELAKAKITVFPHDVSAAIADGSMDVKECLFPLAQGEQEVPADEELVE 561
            DV AYS+ADT++DSP LNSTL+ AMRDYFGDDGREVQDYMKRP   +GEPMFRCVIVGSG RELQLA+ L  S V+ GLYYCPDH   CDIEMNK+AQS TVSAE RP+D VRFAKWC+ADAVFIGPDRQ+ ISRE E ELA A ITVF HDVSAAIA+G+MD KECL PLAQ E +   +E+LVE
Sbjct:   43 DVSAYSLADTVKDSPLLNSTLMNAMRDYFGDDGREVQDYMKRPLNENGEPMFRCVIVGSGERELQLARVLSGSDVMRGLYYCPDHAAVCDIEMNKFAQSATVSAETRPEDVVRFAKWCLADAVFIGPDRQRSISREVESELAHAGITVFQHDVSAAIAEGNMDAKECLLPLAQSESDTRTEEQLVE 228          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A7S0ZFC4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFC4_9RHOD)

HSP 1 Score: 277 bits (709), Expect = 4.400e-85
Identity = 146/338 (43.20%), Postives = 206/338 (60.95%), Query Frame = 0
Query:    1 MSPFVSNA---PANPNNGYLLPDPPDDTVSRLRFS-STNAP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINS----FATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSSGRTNMESTKLL 328
            MS F S A   P NPNN  L+ +PP+D +S + FS S   P  FL A SW+  VR W+V  + G    V + +  AP+L ++W +D S I  AG    A  W  AT   ++VA HD  I+    VS + +      T  WD  ++YWD+R PTG+P+ SV + ER Y+MDA G L+V+A ADRKI IYDVRKP+  Y E+ + LKYQTR ++ +PD  G+ VG VEG+VS+++V ++  K +++F CH+D  G + +VN+I FH       TAGSDG   FWDKD K R  +++FQK+  PI    F+S+G++YAYAV YDW +G+        + +L
Sbjct:    1 MSAFGSPAAAAPNNPNNDILVSEPPNDGISSMAFSPSALRPKNFLVAGSWDNQVRCWEVQQS-GQTVPVGMINHDAPVLSVAWSTDGSAIFSAGCDKTAKMWSPATNQQQLVAQHDAPIKSVLYVSDMGNGSPCIITGSWDKSVKYWDIRQPTGSPIGSVPMSERVYSMDAVGNLLVVATADRKILIYDVRKPTTPYFEKLSMLKYQTRVVSCFPDQTGFAVGSVEGRVSIDHVSEADKKNDFAFKCHRD-DGAIYAVNSIAFHEGYGTLATAGSDGGFTFWDKDAKQR--LKQFQKLPYPISTSCFNSEGNIYAYAVSYDWSKGAENHNPSNKSYIL 334          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A6T6AZA7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AZA7_9RHOD)

HSP 1 Score: 276 bits (707), Expect = 1.770e-84
Identity = 134/313 (42.81%), Postives = 198/313 (63.26%), Query Frame = 0
Query:   11 NPNNGYLLPDPPDDTVSRLRFS-STNAP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINS----FATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGS 316
            NPN   L+   P+D V  LRFS S+ AP  FL A SW+G VR W+V    G  + V +     P+L ++W +D   +  AGA   A  W+  T     +A HD  IR    +  + +      T  WD  +R+WDVR+PTG P+ +V + ER YAMD RGPLMV+  A+RKI ++D+R PS  Y ++++QLKYQTRCI+ +PD  G+ VGGVEG+VS+++V+++    +++F CH+D  G++ +VN+I FH     F TAGSDG  +FWDKD ++R  +++F K+ QPI    F+ DG+++ Y+VGYDW +G+
Sbjct:   35 NPNGDILVQQCPNDGVQELRFSPSSLAPKNFLVAGSWDGEVRCWEVQ-GNGQTSPVGMYKHDGPVLSVAWSADGQAVFSAGADQLAKMWNPVTNQAVPIAKHDGVIRHIFYIPDMGNGSPAVVTGSWDKSVRFWDVRAPTGTPMGTVPVSERIYAMDVRGPLMVVGTAERKIYVFDIRSPSRPYSDKFSQLKYQTRCISTFPDQTGFAVGGVEGRVSIDHVREADRPNDFAFKCHRDTDGSIYAVNSISFHEGYGTFATAGSDGAFNFWDKDSRNR--LKQFHKLDQPIMSTAFNHDGTIFGYSVGYDWSKGA 344          
BLAST of Ggra5093.t1 vs. uniprot
Match: M2XRG4 (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRG4_GALSU)

HSP 1 Score: 269 bits (688), Expect = 8.710e-82
Identity = 133/331 (40.18%), Postives = 200/331 (60.42%), Query Frame = 0
Query:   11 NPNNGYLLPDPPDDTVSRLRFS-STNAP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINS----FATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSSGRT-NMESTKLLAFVAP 333
            NPNN  L+   P+DTVS + FS    AP  F+ A SW+  VR+W++  A G+ + + +    AP+LD++W +D  TI   G       W+ AT   + +A HD  IRC    S + +      T  WD  L+YWD R+ T  PL +V LPER YAMD  GP++V+A A+R+  +YD+R P+  Y ++ + ++YQ+RC+A + D  G+ +G +EG+V +E +Q++  K ++++ CH+D+   + +VNAI FH     F TAGSDG  +FWDKD K R  + +FQ++ QPI    F+ DG+++ YAVGYDW QG   R  N ++  LL  V P
Sbjct:   28 NPNNDKLVNQSPNDTVSSIAFSPKALAPNNFIVAGSWDNEVRLWQIQ-ASGDTSPIGMIQHEAPVLDVAWSADGMTIFSVGCERTGKMWNPATNQVQPIAQHDAPIRCVRFASDLGTGSPAVVTGSWDKTLKYWDPRASTNTPLGTVTLPERVYAMDVLGPVLVVATANRRTLVYDIRNPTTPYRDKESPMRYQSRCVAIFTDMTGFALGSIEGRVGIEYIQEADQKLSFAYKCHRDRNNRIFAVNAISFHPVFGTFSTAGSDGYFNFWDKDSKMR--LHQFQQVNQPITCTAFNHDGTIFGYAVGYDWSQGVENRDPNAKNYILLHAVKP 355          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A1X6PDL1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDL1_PORUM)

HSP 1 Score: 268 bits (686), Expect = 1.310e-81
Identity = 137/327 (41.90%), Postives = 199/327 (60.86%), Query Frame = 0
Query:    1 MSPFVSNAPA---NPNNGYLLPDPPDDTVSRLRFSSTN-AP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINSFA----TAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGSS 317
            M+ F + AP    NPNN  L+ +PP+D +S L FS T  AP  FL A +W+  VR +++    G  T V L   + P+LD+ W  D  TI+ A     A  W +AT  +  VA H  +I+    V  +   A    T  WD  ++YWD R+PTG P+ +V +PER YAMD R PLMV+A ADRK+ +YD+R+P+  + E+ + LKYQTRC+A + D  GY VG VEG+VS+++V ++   ++++F CH+D  G   +VNAI FH     F TAG+DG   FWDKD K R  +++F K+  PI    F+ DG+++AYA  Y+W +G++
Sbjct:    1 MAAFGTAAPGPPHNPNNDVLVSEPPNDGISSLAFSPTALAPKNFLIAGTWDNEVRCYEISNT-GTTTPVGLIKHAGPVLDVGWSPDGQTIVSASCDKSAKIWSVATQQSNPVAMHAAAIKSIAYVGDMGGGAPAVITGSWDKTVKYWDPRAPTGQPMGTVNVPERVYAMDVRAPLMVVATADRKLQVYDIRRPTTPFHEKLSLLKYQTRCVATFADGTGYAVGSVEGRVSIDHVTEADRTKDFAFKCHRDPDGPAHAVNAIAFHQTWGTFATAGADGNFTFWDKDAKQR--LKQFSKLDTPISATCFNHDGTIFAYAASYEWSKGAA 324          
BLAST of Ggra5093.t1 vs. uniprot
Match: R7QAP6 (WD40 repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAP6_CHOCR)

HSP 1 Score: 263 bits (671), Expect = 1.790e-79
Identity = 137/319 (42.95%), Postives = 189/319 (59.25%), Query Frame = 0
Query:    6 SNAPANPNNGYLLPDPPDDTVSRLRFSS-TNAP--FLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIR----CTHDVSSINSFATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMS-SVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQGS 316
            S  P NPN   LL DPP DTV  L FS  T AP  FL ++SW+  VR W+V  + G++T + +   SAP+LD++W +D  ++  AGA   A  W L+   T  VAAHD  IR    C    +   +  T  WD  ++YWD+R+PTG  + +V+L  + YAMD R P                  P E+Y E+  QLK+Q RC+A +PD  GY VG +EG+VS+++VQD   K +++F CH+D    +   VN+I FH Q   F TAG DG  +FWDKD K R  +++FQ++ QPI    FSSDG++YAYAVGYDW +G+
Sbjct:    8 SAQPHNPNGDVLLTDPPSDTVQSLSFSPPTLAPKSFLVSASWDSEVRCWEVQ-SNGSSTPIGMIKHSAPVLDVAWSADGRSVFSAGAEKVAKMWMLSGNQTTTVAAHDAPIRHVFYCNDLGNGSPALVTGSWDKTIKYWDIRAPTGTAMGTVQLSSKVYAMDVRAPXXXXXXXXXXXXXXXXXXPQEVYHEKIAQLKHQFRCLATFPDQAGYAVGSIEGRVSIDHVQDKDRKLDFAFKCHRDADSNVIYPVNSIAFHEQHGTFATAGGDGGFNFWDKDNKHR--LKQFQRVNQPITAGAFSSDGNIYAYAVGYDWSKGA 323          
BLAST of Ggra5093.t1 vs. uniprot
Match: A0A090M6J9 (WD40/YVTN repeat-like-containing domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M6J9_OSTTA)

HSP 1 Score: 259 bits (661), Expect = 4.020e-78
Identity = 131/315 (41.59%), Postives = 190/315 (60.32%), Query Frame = 0
Query:    1 MSPFVSNAPANPNNGYLLPDPPDDTVSRLRFSSTNAPFLAASSWNGTVRVWKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLATGTTEVVAAHDNSIRCTHDVSSINSFATAGWDSLLRYWDVRSPTGAPLLSVKLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRCIAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNAIRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSDGSMYAYAVGYDWLQG 315
            MS     APANPN  + + +PP D +S L +S     FL A++W+G V  ++V    G A   + T   AP+L  +W +D +++   G    A +WDLAT  +  VAAHD++IR    +  +N   T  WD  LRYWD R     P L V+LPER YA+D + PL+V+  A+R+I I+D+ +P   Y    + LKYQTRC+A +PD  GY VG +EG+V+V++V+D+   +N++F CH++    + SVN+I FH     F TAG+DG  +FWDKD K R  ++   K   PI   +F+ DG++YAYAV YDW +G
Sbjct:    1 MSWGAPTAPANPNGDFTVANPPSDGISSLEWSPVGN-FLVATAWDGDVYCYEVAQN-GQAMPKASTKHEAPVLCSAWSADGASVFAGGCDNIAKKWDLATQQSTQVAAHDSAIRHMAWIQEVNLLVTGSWDRTLRYWDTRQQN--PALKVQLPERCYALDVKHPLLVVGCAERQIQIFDLNRPDVAYKNVMSPLKYQTRCVATFPDRSGYLVGSIEGRVAVQHVEDNLQSKNFTFKCHREGTQDIYSVNSISFHPTFGTFVTAGADGNYNFWDKDSKQR--LKNMNKCPAPISCGNFNRDGTIYAYAVSYDWSKG 309          
The following BLAST results are available for this feature:
BLAST of Ggra5093.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J9758.590e-16975.16Nucleoporin GLE2 n=1 Tax=Gracilariopsis chorda Tax... [more]
R7QHN84.240e-12154.74WD40 repeat-containing protein n=1 Tax=Chondrus cr... [more]
A0A5J4YY251.430e-9046.73Protein RAE1 n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A2V3J6U51.630e-8974.73GARS_N domain-containing protein n=1 Tax=Gracilari... [more]
A0A7S0ZFC44.400e-8543.20Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6T6AZA71.770e-8442.81Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XRG48.710e-8240.18Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]
A0A1X6PDL11.310e-8141.90Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QAP61.790e-7942.95WD40 repeat-containing protein n=1 Tax=Chondrus cr... [more]
A0A090M6J94.020e-7841.59WD40/YVTN repeat-like-containing domain n=2 Tax=Os... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 99..138
e-value: 18.0
score: 9.0
coord: 58..97
e-value: 16.0
score: 9.4
coord: 11..52
e-value: 0.28
score: 20.2
coord: 228..273
e-value: 9.3E-4
score: 28.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 32..52
e-value: 0.057
score: 14.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 241..282
score: 8.837541
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 106..141
score: 8.536777
NoneNo IPR availableGENE3D3.40.50.20coord: 427..524
e-value: 7.5E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..353
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 8..318
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..331
e-value: 7.4E-75
score: 254.6
IPR037631mRNA export factor Gle2/RAE1PANTHERPTHR10971:SF11MRNA EXPORT FACTORcoord: 8..318
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 22..307
IPR016185Pre-ATP-grasp domain superfamilySUPERFAMILY52440PreATP-grasp domaincoord: 427..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:442415..445260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5093.t1Ggra5093.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 442415..445260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5093.t1 ID=Ggra5093.t1|Name=Ggra5093.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=562bp
MSPFVSNAPANPNNGYLLPDPPDDTVSRLRFSSTNAPFLAASSWNGTVRV
WKVDPAVGNATAVSLTHDSAPILDLSWLSDNSTIIYAGASTRAHRWDLAT
GTTEVVAAHDNSIRCTHDVSSINSFATAGWDSLLRYWDVRSPTGAPLLSV
KLPERAYAMDARGPLMVLALADRKIAIYDVRKPSELYLERYTQLKYQTRC
IAAWPDAMGYNVGGVEGKVSVENVQDSKSKQNYSFFCHKDKQGTMSSVNA
IRFHYQSRAFCTAGSDGMLHFWDKDRKDRASMRRFQKMGQPICDMDFSSD
GSMYAYAVGYDWLQGSSGRTNMESTKLLAFVAPLPSSRTPPRASASQKSD
KRSGGATPRPAARPKRRPKRPPTAPDVKAYSIADTLRDSPHLNSTLLTAM
RDYFGDDGREVQDYMKRPRTADGEPMFRCVIVGSGGRELQLAKTLCDSGV
ISGLYYCPDHDVACDIEMNKYAQSTTVSAEKRPKDAVRFAKWCVADAVFI
GPDRQQHISREEEVELAKAKITVFPHDVSAAIADGSMDVKECLFPLAQGE
QEVPADEELVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037631Gle2/RAE1
IPR036322WD40_repeat_dom_sf
IPR016185PreATP-grasp_dom_sf