Ggra5091.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5091.t1
Unique NameGgra5091.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Homology
[Close]
BLAST of Ggra5091.t1 vs. uniprot
Match: A0A2V3J6Z4 (ZZ-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Z4_9FLOR)

HSP 1 Score: 389 bits (999), Expect = 1.000e-130
Identity = 223/396 (56.31%), Postives = 269/396 (67.93%), Query Frame = 0 
Query:    5 VSVSYGQSTVRVPLS-ERSLKHVCNFATAALAPNCSALVLAFETPSGDQAAVSSDFALRLVLSADHSAGRLVLVDSLHLPTVDQCMTTVLRAVVDTAARGEAAAVFLALSGAWEVASRELTDCANVSTGVNTPSVHTAA----APASVRRRTHPLQS---------------QFDSCVTHALENKLPECSRVLAETARASSLEKDDVFETNVYGATESTALVCFCTHTGVSCAACKVQTIQGTRYRSSALVNFCERCRRSLPDALHTSFTVYDHPWEATDDYAQTCADVFKAPRPPLCMGDVGPRVMHLQYVLYKVGYLNVCQGRFRAGVFCGDTREAIRLFESEHRVGEQQGIYTALIRSVLLRLFDEVEGPSAAARCAAMDGADRTRFRTAMAA 380
            V+VS+G  + ++PL+ + +L  + + A + LAP   +LVLAFETPS D+AAVS+DFA +LVL A  SAGRLVLV +  LPTVDQCMTTVLRAVVDTA R EAAAVFLALSG W  A+R+L+DC    T ++ P V +AA    AP+S R R                        S +T  LE  +P  SR LA+ A +      D      + A ES A+  FCTHTGVSC+AC VQ IQGTRYR S  VN CERCRR+LP+A    FTVYDHPWEA+DDYA++CAD+ +AP PPL +GDVGPRVMHLQYVLYKVGYLNVC   FRAG+FC  TR+AI +FE + R+  Q G+YTALIRSVLL LFDEVE   A  RC+ +  A  TRFRTAMAA
Sbjct:    7 VAVSFGTRSAQIPLTPDAALAPLRSRAISTLAPENPSLVLAFETPSNDRAAVSTDFAFKLVLGAHPSAGRLVLVPAPDLPTVDQCMTTVLRAVVDTATRSEAAAVFLALSGTWHAAARDLSDC---PTPLH-PPVQSAAPQTPAPSSCRPRASXXXXXXXXXXXXXXXXXALDLRSSLTRTLERAVPHSSRALADAACSLVQRASDPS----HAAAESRAVASFCTHTGVSCSACNVQAIQGTRYRCSPSVNLCERCRRALPEAASACFTVYDHPWEASDDYAESCADILRAPTPPLGIGDVGPRVMHLQYVLYKVGYLNVCCVAFRAGLFCSATRDAISVFEYDFRLSNQHGVYTALIRSVLLSLFDEVERRYAGVRCSDIGRASNTRFRTAMAA 394
The following BLAST results are available for this feature:
BLAST of Ggra5091.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6Z41.000e-13056.31ZZ-type domain-containing protein n=1 Tax=Gracilar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036365PGBD-like superfamilySUPERFAMILY47090PGBD-likecoord: 277..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:436336..437478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1Ggra5091.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 436336..437478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MLQHVSVSYGQSTVRVPLSERSLKHVCNFATAALAPNCSALVLAFETPSG
DQAAVSSDFALRLVLSADHSAGRLVLVDSLHLPTVDQCMTTVLRAVVDTA
ARGEAAAVFLALSGAWEVASRELTDCANVSTGVNTPSVHTAAAPASVRRR
THPLQSQFDSCVTHALENKLPECSRVLAETARASSLEKDDVFETNVYGAT
ESTALVCFCTHTGVSCAACKVQTIQGTRYRSSALVNFCERCRRSLPDALH
TSFTVYDHPWEATDDYAQTCADVFKAPRPPLCMGDVGPRVMHLQYVLYKV
GYLNVCQGRFRAGVFCGDTREAIRLFESEHRVGEQQGIYTALIRSVLLRL
FDEVEGPSAAARCAAMDGADRTRFRTAMAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036365PGBD-like_sf