Ggra5091.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5091.t1
Unique NameGgra5091.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:436336..437478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5091Ggra5091Gracilaria gracilis GNS1m malegenetig00000069_pilon 436336..437478 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1.start1Ggra5091.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000069_pilon 436336..436338 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1.CDS1Ggra5091.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000069_pilon 436336..437478 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1.exon1Ggra5091.t1.exon1Gracilaria gracilis GNS1m maleexontig00000069_pilon 436336..437478 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1.stop1Ggra5091.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000069_pilon 437476..437478 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5091.t1Ggra5091.t1Gracilaria gracilis GNS1m malepolypeptidetig00000069_pilon 436336..437478 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=381bp
MLQHVSVSYGQSTVRVPLSERSLKHVCNFATAALAPNCSALVLAFETPSG
DQAAVSSDFALRLVLSADHSAGRLVLVDSLHLPTVDQCMTTVLRAVVDTA
ARGEAAAVFLALSGAWEVASRELTDCANVSTGVNTPSVHTAAAPASVRRR
THPLQSQFDSCVTHALENKLPECSRVLAETARASSLEKDDVFETNVYGAT
ESTALVCFCTHTGVSCAACKVQTIQGTRYRSSALVNFCERCRRSLPDALH
TSFTVYDHPWEATDDYAQTCADVFKAPRPPLCMGDVGPRVMHLQYVLYKV
GYLNVCQGRFRAGVFCGDTREAIRLFESEHRVGEQQGIYTALIRSVLLRL
FDEVEGPSAAARCAAMDGADRTRFRTAMAA*
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spliced messenger RNA

>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000069_pilon:436336..437478+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGCAACACGTCTCGGTCTCGTACGGTCAAAGCACCGTTCGCGTTCC
CCTCTCGGAGCGCTCTTTGAAGCACGTATGCAACTTCGCTACAGCCGCCT
TAGCGCCCAATTGTTCCGCGCTTGTGTTGGCGTTCGAGACGCCTTCTGGA
GATCAAGCCGCCGTTTCATCCGACTTTGCGCTACGACTTGTGTTGAGTGC
TGATCATTCTGCAGGCCGACTGGTGTTGGTCGATTCACTACACCTACCCA
CCGTCGATCAATGCATGACTACTGTTTTGCGCGCCGTCGTGGACACCGCA
GCGCGTGGAGAGGCCGCTGCCGTGTTTCTGGCGCTTTCTGGAGCTTGGGA
GGTGGCGTCGAGAGAACTGACTGACTGTGCCAATGTGAGCACCGGCGTCA
ACACACCGTCCGTGCACACGGCCGCCGCGCCCGCCAGCGTGAGACGGAGA
ACGCACCCGTTGCAGTCGCAGTTCGACTCGTGCGTCACGCACGCGTTGGA
GAACAAATTGCCAGAGTGCTCGCGCGTGCTGGCCGAGACGGCGCGAGCTA
GCTCGTTGGAAAAGGATGATGTGTTCGAGACGAACGTTTATGGCGCTACA
GAGTCTACGGCGCTGGTGTGTTTCTGCACGCATACGGGCGTGAGCTGCGC
CGCTTGTAAGGTGCAGACCATCCAGGGCACGCGTTATCGAAGTAGCGCGT
TGGTGAATTTTTGCGAGAGGTGTCGAAGGTCATTACCGGATGCATTGCAC
ACTAGTTTCACCGTGTACGACCACCCATGGGAGGCGACGGATGACTATGC
GCAGACTTGCGCGGACGTATTTAAGGCGCCCAGACCGCCATTATGTATGG
GGGACGTGGGGCCTCGAGTGATGCACCTGCAGTACGTGCTGTACAAAGTG
GGCTACCTCAACGTGTGCCAGGGGCGCTTCCGCGCCGGCGTGTTTTGTGG
AGATACTCGCGAGGCGATCCGACTGTTTGAGAGCGAGCATCGCGTGGGCG
AGCAGCAGGGCATCTACACGGCACTGATTCGCAGCGTGTTGCTGCGGCTG
TTCGACGAGGTGGAGGGACCAAGTGCGGCCGCGCGCTGCGCAGCGATGGA
CGGCGCCGACAGAACGCGCTTCCGCACAGCCATGGCGGCGTAA
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protein sequence of Ggra5091.t1

>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MLQHVSVSYGQSTVRVPLSERSLKHVCNFATAALAPNCSALVLAFETPSG
DQAAVSSDFALRLVLSADHSAGRLVLVDSLHLPTVDQCMTTVLRAVVDTA
ARGEAAAVFLALSGAWEVASRELTDCANVSTGVNTPSVHTAAAPASVRRR
THPLQSQFDSCVTHALENKLPECSRVLAETARASSLEKDDVFETNVYGAT
ESTALVCFCTHTGVSCAACKVQTIQGTRYRSSALVNFCERCRRSLPDALH
TSFTVYDHPWEATDDYAQTCADVFKAPRPPLCMGDVGPRVMHLQYVLYKV
GYLNVCQGRFRAGVFCGDTREAIRLFESEHRVGEQQGIYTALIRSVLLRL
FDEVEGPSAAARCAAMDGADRTRFRTAMAA*
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mRNA from alignment at tig00000069_pilon:436336..437478+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000069_pilon:436336..437478+ (Gracilaria gracilis GNS1m male)
ATGTTGCAACACGTCTCGGTCTCGTACGGTCAAAGCACCGTTCGCGTTCC
CCTCTCGGAGCGCTCTTTGAAGCACGTATGCAACTTCGCTACAGCCGCCT
TAGCGCCCAATTGTTCCGCGCTTGTGTTGGCGTTCGAGACGCCTTCTGGA
GATCAAGCCGCCGTTTCATCCGACTTTGCGCTACGACTTGTGTTGAGTGC
TGATCATTCTGCAGGCCGACTGGTGTTGGTCGATTCACTACACCTACCCA
CCGTCGATCAATGCATGACTACTGTTTTGCGCGCCGTCGTGGACACCGCA
GCGCGTGGAGAGGCCGCTGCCGTGTTTCTGGCGCTTTCTGGAGCTTGGGA
GGTGGCGTCGAGAGAACTGACTGACTGTGCCAATGTGAGCACCGGCGTCA
ACACACCGTCCGTGCACACGGCCGCCGCGCCCGCCAGCGTGAGACGGAGA
ACGCACCCGTTGCAGTCGCAGTTCGACTCGTGCGTCACGCACGCGTTGGA
GAACAAATTGCCAGAGTGCTCGCGCGTGCTGGCCGAGACGGCGCGAGCTA
GCTCGTTGGAAAAGGATGATGTGTTCGAGACGAACGTTTATGGCGCTACA
GAGTCTACGGCGCTGGTGTGTTTCTGCACGCATACGGGCGTGAGCTGCGC
CGCTTGTAAGGTGCAGACCATCCAGGGCACGCGTTATCGAAGTAGCGCGT
TGGTGAATTTTTGCGAGAGGTGTCGAAGGTCATTACCGGATGCATTGCAC
ACTAGTTTCACCGTGTACGACCACCCATGGGAGGCGACGGATGACTATGC
GCAGACTTGCGCGGACGTATTTAAGGCGCCCAGACCGCCATTATGTATGG
GGGACGTGGGGCCTCGAGTGATGCACCTGCAGTACGTGCTGTACAAAGTG
GGCTACCTCAACGTGTGCCAGGGGCGCTTCCGCGCCGGCGTGTTTTGTGG
AGATACTCGCGAGGCGATCCGACTGTTTGAGAGCGAGCATCGCGTGGGCG
AGCAGCAGGGCATCTACACGGCACTGATTCGCAGCGTGTTGCTGCGGCTG
TTCGACGAGGTGGAGGGACCAAGTGCGGCCGCGCGCTGCGCAGCGATGGA
CGGCGCCGACAGAACGCGCTTCCGCACAGCCATGGCGGCGTAA
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Coding sequence (CDS) from alignment at tig00000069_pilon:436336..437478+

>Ggra5091.t1 ID=Ggra5091.t1|Name=Ggra5091.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1143bp|location=Sequence derived from alignment at tig00000069_pilon:436336..437478+ (Gracilaria gracilis GNS1m male)
ATGTTGCAACACGTCTCGGTCTCGTACGGTCAAAGCACCGTTCGCGTTCC
CCTCTCGGAGCGCTCTTTGAAGCACGTATGCAACTTCGCTACAGCCGCCT
TAGCGCCCAATTGTTCCGCGCTTGTGTTGGCGTTCGAGACGCCTTCTGGA
GATCAAGCCGCCGTTTCATCCGACTTTGCGCTACGACTTGTGTTGAGTGC
TGATCATTCTGCAGGCCGACTGGTGTTGGTCGATTCACTACACCTACCCA
CCGTCGATCAATGCATGACTACTGTTTTGCGCGCCGTCGTGGACACCGCA
GCGCGTGGAGAGGCCGCTGCCGTGTTTCTGGCGCTTTCTGGAGCTTGGGA
GGTGGCGTCGAGAGAACTGACTGACTGTGCCAATGTGAGCACCGGCGTCA
ACACACCGTCCGTGCACACGGCCGCCGCGCCCGCCAGCGTGAGACGGAGA
ACGCACCCGTTGCAGTCGCAGTTCGACTCGTGCGTCACGCACGCGTTGGA
GAACAAATTGCCAGAGTGCTCGCGCGTGCTGGCCGAGACGGCGCGAGCTA
GCTCGTTGGAAAAGGATGATGTGTTCGAGACGAACGTTTATGGCGCTACA
GAGTCTACGGCGCTGGTGTGTTTCTGCACGCATACGGGCGTGAGCTGCGC
CGCTTGTAAGGTGCAGACCATCCAGGGCACGCGTTATCGAAGTAGCGCGT
TGGTGAATTTTTGCGAGAGGTGTCGAAGGTCATTACCGGATGCATTGCAC
ACTAGTTTCACCGTGTACGACCACCCATGGGAGGCGACGGATGACTATGC
GCAGACTTGCGCGGACGTATTTAAGGCGCCCAGACCGCCATTATGTATGG
GGGACGTGGGGCCTCGAGTGATGCACCTGCAGTACGTGCTGTACAAAGTG
GGCTACCTCAACGTGTGCCAGGGGCGCTTCCGCGCCGGCGTGTTTTGTGG
AGATACTCGCGAGGCGATCCGACTGTTTGAGAGCGAGCATCGCGTGGGCG
AGCAGCAGGGCATCTACACGGCACTGATTCGCAGCGTGTTGCTGCGGCTG
TTCGACGAGGTGGAGGGACCAAGTGCGGCCGCGCGCTGCGCAGCGATGGA
CGGCGCCGACAGAACGCGCTTCCGCACAGCCATGGCGGCGTAA
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