Ggra5077.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5077.t1
Unique NameGgra5077.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length318
Homology
BLAST of Ggra5077.t1 vs. uniprot
Match: A0A2V3J6V4 (DUF3598 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V4_9FLOR)

HSP 1 Score: 558 bits (1439), Expect = 7.510e-200
Identity = 261/317 (82.33%), Postives = 291/317 (91.80%), Query Frame = 0
Query:    1 MEIGRGPPNFLPGGGQLSNRQLNEESWEGYLKNLGTWIGKRALSNPRGKVLIDLPTRTTAERFRTPQGEDFVLWRFSVRTADGVDEAEEEWSRSELADLGALAVDGSFSVGGDVFCGERMTVDQCLVDDSCRIRTTHAFDWEGCISGIIATRERIVPKNEPLEKTLKLSFVEPAAWRSPRVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGDDGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSVASPIRIRKGRPFTVESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            ME G   P +LPG  +   RQL E SWEGYL+NLGTWIGKRALSN RGKVLIDLPTRTTAERFRTPQ E+FVLWRF+VRTADG+DE EEEWSRSELAD GALA DG FSVG ++F GE +T+DQCL+D S R+RTTHAFDWEGC+SGI+ATRER+VPK EPLEK+LKLSFVEPAAWRSPR+LFDYILG+WEGKGI+VH RTGQVY+LTSRLKI+Q+IEG+VTESS+LRIG++GPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVS+ SPIRIRKGRPFT+ESAFLMRPDCRKRV+R+YNNQCEWVNTVFINERRVG
Sbjct:    1 MEAGYEKPKYLPGDAKTGGRQLTEHSWEGYLRNLGTWIGKRALSNARGKVLIDLPTRTTAERFRTPQSEEFVLWRFAVRTADGIDEQEEEWSRSELADFGALAGDGCFSVGAEIFSGEPITIDQCLMDSSFRVRTTHAFDWEGCVSGIVATRERLVPKGEPLEKSLKLSFVEPAAWRSPRILFDYILGVWEGKGIAVHARTGQVYQLTSRLKISQSIEGKVTESSILRIGEEGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSIGSPIRIRKGRPFTIESAFLMRPDCRKRVIRLYNNQCEWVNTVFINERRVG 317          
BLAST of Ggra5077.t1 vs. uniprot
Match: A0A7S2ZBA5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBA5_9RHOD)

HSP 1 Score: 229 bits (584), Expect = 4.610e-70
Identity = 125/316 (39.56%), Postives = 179/316 (56.65%), Query Frame = 0
Query:    3 IGRGPPNFLPGGGQLSNRQLNEESWEGYLKNLGTWIGKRALSNPRGKVLIDLPTRTTAERFRTPQGEDFVLWRFSVRTADG-VDEAEEEWSRSELADLGALAVDGSFSVGGDVFCGERMTVDQCLVDDSCRIRTTHAFDWEGCISGIIATRERIVPKNEPLEKTLKLSFVEPAAWRSPRVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGDDGPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSVASPIRIRKGRPFTVESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            IG G   F  G G++S        W G++ N+G W G+R L N  G  L+D+ T    ER   P+G   V WR       G VD  + EW+R ++   GA    GS+S+G     GE   +DQ  V    R+  ++A+DWEG +SG+I  RER   +   +++      +EP+AW S   LFDY LG WEG GI  H ++G+   ++SR+++N  + G + + S L +   G  R   ++   DG+ +++A + VQ+FLLPGGVS+ASPI I +G PF VE AFL+RPD R R+ R YN    W+NTVF+ ERRV 
Sbjct:   19 IGGGSGPFAEGSGRMS--------WSGFVNNVGEWEGRRVLYNGNGVELLDVSTSARVERVDDPEG---VRWRTEAYREGGEVDIEDVEWTRRDVDLYGAAVESGSYSLGPSAIFGENFKIDQGAVASDVRVCASYAYDWEGKLSGLIVARER---RTNVVQRA-----IEPSAWNSSAALFDYYLGTWEGSGIITHRQSGRSIDVSSRIRLNFNLNGNLHQVSSLSV-IGGQHREVQSTAARDGSILLFANAGVQMFLLPGGVSIASPIIITRGEPFVVELAFLVRPDERIRIARCYNADGAWMNTVFLQERRVA 314          
BLAST of Ggra5077.t1 vs. uniprot
Match: A0A2H2X6E5 (DUF3598 domain-containing protein n=2 Tax=unclassified Calothrix TaxID=2619626 RepID=A0A2H2X6E5_9CYAN)

HSP 1 Score: 110 bits (275), Expect = 8.260e-25
Identity = 75/295 (25.42%), Postives = 143/295 (48.47%), Query Frame = 0
Query:   27 WEGYLKNLGTWIGKRALSNPRGKVLIDLPTRTTAERFRTPQGEDFVLWRFSVRTADGVDEAEEEWSRSELADLGALAVDGSFSVGGDVFC-GERMTVDQCLVDDSCRIRTTHAFDWEGCISGIIATRERIVPKNEPLEKTLKLSFVEPAAWRSPRVLFDYILGLWEGKGISVHTRTGQVYKLTSRLKINQTIEGRVTESSVLRIGDD---GPSRVYDASGRIDGNFIIYAMSNVQVFLLPGGVSVASPIRIRKGRPFTVESAFLMRPDCRKRVLRVYNNQCEWVNTVFINERRVG 317
            WE +LKNL  W+G     +P+G+ + D P+R T E     Q     L R      +G+ +   E+S    + L     +G+FS G   F  G     +  L+  + R+R    F+ +G +  +   RE     +E  +K  +           P +  + +LG WEG+  +++T        T+++K++   +G + ++  L  GD      +++ D+    DGN      + +Q+ +LP G S   P++ +  +P  +E+A+L+ P+ R+R++R Y+++ EWV+   ++ER+V 
Sbjct:    5 WESFLKNLNVWVGSFTQFSPQGEQIEDRPSRLTLEGLNDNQSARLTLQR------EGLQDLVLEFSTMSRSTL--FFENGAFSQGTIQFAPGTEFGAEFGLIHQNRRLRLVQLFNNDGNLKSLTLIREH----SEGSDKDER-----------PPLTVEALLGEWEGETTTIYTDLRNPVTSTTKMKLHLDSQGHLVQN--LSFGDHTITSTAKINDSILEFDGN----PSNAIQILMLPDGASATFPVKAQPRQPLFLETAWLIEPNWRQRMIRSYDDRGEWVSLTLVSERKVS 270          
The following BLAST results are available for this feature:
BLAST of Ggra5077.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6V47.510e-20082.33DUF3598 domain-containing protein n=1 Tax=Gracilar... [more]
A0A7S2ZBA54.610e-7039.56Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2H2X6E58.260e-2525.42DUF3598 domain-containing protein n=2 Tax=unclassi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 23..158
e-value: 3.6E-11
score: 45.4
IPR012674CalycinGENE3D2.40.128.20coord: 177..316
e-value: 9.6E-25
score: 89.1
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 24..154
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 182..315
IPR022017Domain of unknown function DUF3598PFAMPF12204DUF3598coord: 26..312
e-value: 4.2E-22
score: 78.9
IPR005527Cell division topological specificity factor MinEPANTHERPTHR33404CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTICcoord: 26..315
NoneNo IPR availablePANTHERPTHR33404:SF1SLL0497 PROTEINcoord: 26..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:405777..406730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5077.t1Ggra5077.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 405777..406730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5077.t1 ID=Ggra5077.t1|Name=Ggra5077.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=318bp
MEIGRGPPNFLPGGGQLSNRQLNEESWEGYLKNLGTWIGKRALSNPRGKV
LIDLPTRTTAERFRTPQGEDFVLWRFSVRTADGVDEAEEEWSRSELADLG
ALAVDGSFSVGGDVFCGERMTVDQCLVDDSCRIRTTHAFDWEGCISGIIA
TRERIVPKNEPLEKTLKLSFVEPAAWRSPRVLFDYILGLWEGKGISVHTR
TGQVYKLTSRLKINQTIEGRVTESSVLRIGDDGPSRVYDASGRIDGNFII
YAMSNVQVFLLPGGVSVASPIRIRKGRPFTVESAFLMRPDCRKRVLRVYN
NQCEWVNTVFINERRVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR022017DUF3598
IPR005527MinE