Ggra5063.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5063.t1 vs. uniprot
Match: A0A2V3J6Q7 (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q7_9FLOR) HSP 1 Score: 511 bits (1316), Expect = 8.260e-182 Identity = 247/296 (83.45%), Postives = 270/296 (91.22%), Query Frame = 0
Query: 1 MPDPALRALQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRNDGGEYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQQAADW 296
MPDP LRALQT ILRICQ+ P+GLTD EIVQ LD +VKPKHRLD+YNELLR GRLKLLKK+VGEG KKDVVVYQWVSLKDAEKFRGLDA ERMVYDMIERSGQNGVTKRDMKFRTNIQN SELKQIVERLIARGLVKEIKSVQG NKKVYIAS+VEPS AHTGGPWYND++EFDT FI+TIYA +L YM +ME+V+++SVT+YVADL ISNE L+KSDI+QLMMTMLYDSVIEEC GR DGG+Y+R T+TP VNHLSS+PCGSCPVFHDCSPDGVISPKTCVYMKEWL+Q DW
Sbjct: 1 MPDPLLRALQTTILRICQTCPEGLTDGEIVQRLDTDVKPKHRLDSYNELLRTGRLKLLKKTVGEGPTKKDVVVYQWVSLKDAEKFRGLDATERMVYDMIERSGQNGVTKRDMKFRTNIQNTSELKQIVERLIARGLVKEIKSVQGANKKVYIASEVEPSAAHTGGPWYNDDKEFDTEFIETIYAHILSYMGTMEFVTIESVTDYVADLKISNEDLTKSDIRQLMMTMLYDSVIEECEGRKDGGDYYRRATSTPGVNHLSSVPCGSCPVFHDCSPDGVISPKTCVYMKEWLEQTTDW 296
BLAST of Ggra5063.t1 vs. uniprot
Match: R7QCX5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX5_CHOCR) HSP 1 Score: 363 bits (931), Expect = 1.450e-123 Identity = 171/273 (62.64%), Postives = 214/273 (78.39%), Query Frame = 0
Query: 24 LTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRNDGGEYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQQAADW 296
+TD E+ L + K K R+ YN+LL GR++L + G G +K V+YQWVS +DAEKF+GLDA++RMV D++ + GQNG TK++MKFRTNIQ+ +ELKQI+ERLI+R L+KEIKSVQGTNK++YI + +EPST HTGGPWYND+QEFDTVFI+ IY QVL ++ YV+VD VT YVA++ +SNE LS SDI+ LM TMLYD+VIE C G+ DG EYFR V TPAVNHL+SIPCGSCPVFHDC P GVISP+TCVYM +WL+ DW
Sbjct: 1 MTDKEVTAKLHFDTKAKIRIAAYNKLLAKGRIRLAARVTGTGENRKQQVLYQWVSAEDAEKFKGLDASDRMVLDLVVKGGQNGATKKEMKFRTNIQSNTELKQILERLISRNLIKEIKSVQGTNKRIYIKAGLEPSTLHTGGPWYNDDQEFDTVFIEAIYEQVLAFIKKTNYVTVDQVTSYVAEIKLSNEELSHSDIKSLMNTMLYDTVIELCEGKGDGHEYFRHVQPTPAVNHLASIPCGSCPVFHDCVPGGVISPQTCVYMGDWLKSVTDW 273
BLAST of Ggra5063.t1 vs. uniprot
Match: E1Z933 (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z933_CHLVA) HSP 1 Score: 177 bits (450), Expect = 9.930e-51 Identity = 96/285 (33.68%), Postives = 164/285 (57.54%), Query Frame = 0
Query: 7 RALQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRNDGGEYFRI-VTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWL 290
R ++ +IL +C+ P+G+ D + L +V R N LL + +L++L + +Y+ ++ DA +F+GL A + +VY I+ +G G+ RDMK RTN+Q P ++ +I++ L R LVK IKSVQ ++KVY+ ++EP+ TGGPWY + FD+ FI + + Y+ + ++ + ++ + IS +AL + D+++++ T+ D IE G DG ++R+ + + P +SIPCG CPVF++C G ISP+TC+Y +WL
Sbjct: 3 RKVEELILTVCRKHPEGVQDTALEAELP-SVAVNDRAVAINSLLASLKLQILVNPADPSSH-----IYKASAVGDATRFKGLTAEDMLVYQCIQGAGNMGIWTRDMKQRTNLQQP-KINKILKTLEERCLVKSIKSVQNASRKVYMLYELEPAKELTGGPWYGPDA-FDSEFITVLQEATMSYINTKGDATLADIVRFIKETGISKQALQEDDVERIINTLECDGKIEGVEGDEDGLPHYRLPLMSIPEATPFTSIPCGVCPVFNECVEGGKISPQTCIYFDQWL 279
BLAST of Ggra5063.t1 vs. uniprot
Match: A0A2P6V1J4 (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1J4_9CHLO) HSP 1 Score: 177 bits (449), Expect = 1.570e-50 Identity = 98/287 (34.15%), Postives = 162/287 (56.45%), Query Frame = 0
Query: 7 RALQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRNDGGEYFRIVT-NTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQQ 292
R ++ M+L +C+ P+G+ D + L +V R N LL + +L++L + +Y+ + D +F+GL A + +VY I+ +G G+ RDMK RTN+Q P K I++ L R LVK +KSVQ ++KVY+ ++EP+ TGGPW+ + FD+ F+ + L Y+ S S+ + ++ + IS +AL + D+++++ T+ YD IE+ +DG ++R++ P L+SIPCG CPVF +C G ISP TC Y ++WL+Q
Sbjct: 3 RKVEEMVLAVCRKHPEGVADTVLESELP-DVSVNDRALAINSLLSSMKLQILVNPADPSSH-----IYKASTTGDTARFKGLTAEDMLVYQCIQAAGNIGIWTRDMKQRTNLQQPKVTK-ILKALEERLLVKSVKSVQNASRKVYMLYELEPAKELTGGPWFGPDA-FDSEFVAVLQETTLSYIKSKGQPSLADIVRFIKETGISKQALQEDDVERIINTLEYDGKIEQIE-EDDGDRHYRMMLMRIPESTPLTSIPCGVCPVFSECVEGGKISPATCTYYQDWLEQ 280
BLAST of Ggra5063.t1 vs. uniprot
Match: A0A8J4YZ80 (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4YZ80_9CHEL) HSP 1 Score: 178 bits (452), Expect = 6.970e-50 Identity = 105/300 (35.00%), Postives = 161/300 (53.67%), Query Frame = 0
Query: 13 ILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMF-----------------SMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYD-----SVIEECSGRNDGGEYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWL 290
IL +C+S+ DG+TDA + L NV + R+ N LL G+L LL QK ++Y+ S G D E++ Y +IE + G+ RD++ + NI + ++IV+ +++ L+KEIK V KK Y+ D++P + TGG WY+D QEF+ FID + Q Y+ + + S+ V +Y+AD IS LS+ DI++++ +++YD S++ G ++ + FR+V L IPCG CPVF DC P+GVISP TCVYMK+WL
Sbjct: 92 ILEVCKSNADGITDANLQGELP-NVDAQQRVAAINSLLNAGKLDLL--------QKNKQLIYKLKSPSTVRALDGSDHDEKLAYQVIEEANNKGIWIRDLRIKCNIPL-NRAQKIVKNFLSKKLIKEIKCVNAPRKKYYMLYDIKPHQSVTGGIWYSD-QEFEYEFIDILNQQCFRYLKQRRDNVKLDKSDPVSQKNSSFASLPEVCKYIADTGISKVTLSEEDIEEILNSLIYDRKVEKSIVPSTDGSSENIKLFRVVEPMLPTAGLMRIPCGVCPVFSDCQPNGVISPTTCVYMKDWL 380
BLAST of Ggra5063.t1 vs. uniprot
Match: A0A1Y1IK16 (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK16_KLENI) HSP 1 Score: 174 bits (441), Expect = 2.820e-49 Identity = 103/295 (34.92%), Postives = 160/295 (54.24%), Query Frame = 0
Query: 2 PDPALRALQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRN-----DGGEYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQ 291
PD A+ L+ I +CQ S G+T + L ++ + N LL +L++ ++ + Y+ V+ +D +FRGL + E +VY +I+ S G+ RD+K R+N+Q P ++ +I++ L R L+K +KSV N+KVY+ ++EPS TGG WY EQEFD FI + V ++ + V+++ + +V + L D QQ+ T++YD +EE S + D Y + P N +SIPCG CPV H+CS DG+ISP TCVY +EWLQ
Sbjct: 6 PDSAVFRLEEAIANLCQESDGGVTQKMLQDELP-DIPLEELGSALNVLLSRHQLQMYTQA--------STLYYKPVNQEDRVRFRGLGSEEMLVYQIIQASQNMGIWTRDLKLRSNLQQP-QITKIIKTLEGRRLIKAVKSVASKNRKVYMLYEIEPSREITGGAWYT-EQEFDAEFIGVLREAVKKFVENQGKVTLEEIAAFVKSSGATKVDLRLEDYQQVANTLVYDGEVEEISEFDPDEDADTTFYRMSPMSVPETNAFTSIPCGVCPVLHECSDDGLISPATCVYYQEWLQ 289
BLAST of Ggra5063.t1 vs. uniprot
Match: DNA-directed RNA polymerase III subunit RPC6-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4BA7E (DNA-directed RNA polymerase III subunit RPC6-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4BA7E) HSP 1 Score: 173 bits (438), Expect = 1.510e-48 Identity = 101/307 (32.90%), Postives = 170/307 (55.37%), Query Frame = 0
Query: 9 LQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMF-----------------SMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDS------VIEECSGRNDGGEYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQQ 292
L+ ++++C+ +P G+TD I Q L N+ P+ R+ N LL GR++LLK GAQ ++Y++ + A K +G D E++VY +IE +G G+ RD++F++NIQ ++L +I++ L ++ L+K +KSV + KKVY+ ++EP TGG WY+D Q+F++ F++ + Q ++ + Y S V++Y++ L IS LS+ DI+ ++ T+++D V + S + + FR + L +PCG CPV C G ISP CVYMK+WL +
Sbjct: 18 LEERVVQLCKENPKGITDQLISQDLP-NIPPQQRVTAINRLLSMGRIELLK----SGAQ----LLYRYKDAQAAVKTKGFDLQEKLVYQIIEEAGNKGIWIRDIRFKSNIQM-TQLNKILKNLESKKLIKAVKSVAASKKKVYMLFNLEPDITVTGGAWYSD-QDFESEFVEVLNQQCYKFLQQKVTLAEKMNVDPLAKRNASYSSSQDVSKYISQLGISKVELSEGDIETILNTLVFDGKAEMTLVADSGSSSTEQRKLFRALVPLMPSTGLMRVPCGVCPVSDRCRDGGPISPSKCVYMKDWLSE 313
BLAST of Ggra5063.t1 vs. uniprot
Match: A0A8J1U5W6 (Ofus.G091195 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U5W6_OWEFU) HSP 1 Score: 172 bits (435), Expect = 3.590e-48 Identity = 98/301 (32.56%), Postives = 166/301 (55.15%), Query Frame = 0
Query: 9 LQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYM-----------------FSMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECSGRNDGGE--YFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWL 290
++ IL +C S G+TD ++ Q L N+ P R+ N+LL+NG++ L+K G+Q +VY+ K +G D E++VY +IE SG G+ RD+++++N+ +++ +I++ L ++ L+K +KSV + KKVY+ ++EP + TGG WY+D Q+F+ F+D + Q ++ + Y + +T+Y+++L IS LS DI+ ++ T++YD +E G+ +R + L PCG CPVF DC G++SP TCVYMK+WL
Sbjct: 15 VEARILELCLGSVKGVTDQQL-QTLIPNISPTQRVTAVNKLLQNGKIDLMK----SGSQ----LVYKVKDPDSTSKVKGGDNQEKLVYQIIEESGNKGIWIRDIRWKSNLLL-TQVNKILKSLESKKLIKAVKSVAASKKKVYMLFNLEPDRSVTGGAWYSD-QDFEAEFVDILNQQCFKFLEQRLELAADMNVDPAARMNKAYATSLDITKYISELGISKVELSVEDIETILNTLIYDGKVEHTIMATATGQKKLYRAMRQITQSTGLMRTPCGVCPVFKDCKEGGIVSPSTCVYMKDWL 304
BLAST of Ggra5063.t1 vs. uniprot
Match: K4FV19 (DNA-directed RNA polymerase III subunit RPC6 n=5 Tax=Chondrichthyes TaxID=7777 RepID=K4FV19_CALMI) HSP 1 Score: 171 bits (434), Expect = 5.930e-48 Identity = 103/310 (33.23%), Postives = 170/310 (54.84%), Query Frame = 0
Query: 8 ALQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMFSMEYVSVDS-----------------VTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECS--------GRNDGG-EYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLQ 291
AL++ IL +CQ P G+TD +++Q+ V+PK R N LL G+L LL+ + G ++Y+ + A K +G D E++VY +IE +G G+ RD+++++N+ +E+ +I++ + ++ L+K +KSV + KKVY+ +++P + TGG WY+D Q+F++ F++ + Q ++ + V+ +S V +Y+ +L IS LS DI+ ++ T++YD +E G DG + FR V L PCG CPVF DC G ISP TC+YM EWLQ
Sbjct: 15 ALESRILELCQQFPHGITD-QVIQNDMPQVEPKKRALAINRLLSMGQLDLLRSAAG--------LLYRMKDSQIASKMKGSDNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPL-TEINKILKNMESKKLIKAVKSVAASKKKVYMLYNLQPDRSVTGGAWYSD-QDFESEFVEVLNQQCFKFLQNKAEVARESKQSPMVQRNSSFASSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEVTIIAAKEGTVGSVDGQMKLFRAVNPIIQPTGLVRTPCGMCPVFDDCHEGGDISPATCIYMTEWLQ 313
BLAST of Ggra5063.t1 vs. uniprot
Match: S4RLM9 (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RLM9_PETMA) HSP 1 Score: 171 bits (433), Expect = 8.360e-48 Identity = 98/308 (31.82%), Postives = 167/308 (54.22%), Query Frame = 0
Query: 9 LQTMILRICQSSPDGLTDAEIVQHLDKNVKPKHRLDTYNELLRNGRLKLLKKSVGEGAQKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIERSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARGLVKEIKSVQGTNKKVYIASDVEPSTAHTGGPWYNDEQEFDTVFIDTIYAQVLGYMF-----------------SMEYVSVDSVTEYVADLNISNEALSKSDIQQLMMTMLYDSVIEECS--------GRNDGG-EYFRIVTNTPAVNHLSSIPCGSCPVFHDCSPDGVISPKTCVYMKEWL 290
L++ I+ +CQ P G+TD +++Q+ ++P+ R N LL GRL LL+ + G ++Y+ + A K +G D E++VY +IE +G G+ RD+++++N+ +E+ +I++ L ++ L+K +KSV + KKVY+ ++EP + TGG WY+D Q+F+ F++ + Q ++ + Y S V +Y+ +L IS LS D++ ++ T++YD +E G DG + FR + L PCG CP+FH+C G ISP+TCVYM EW+
Sbjct: 16 LESRIIELCQQFPHGITD-QVIQNDMPQLEPQQRAMAINRLLSTGRLDLLRSNAG--------LLYRLKDAQAASKVKGADNQEKLVYQIIEDAGNKGIWSRDIRYKSNLPL-TEINKILKSLESKKLIKAVKSVAASKKKVYMLYNIEPDRSVTGGAWYSD-QDFEAEFVEILNQQCCKFLQQKADAAQESKQGPLLQRNSSYASSHEVWKYICELGISKVELSMEDVETILNTLIYDGKVERTILSAKEGTVGCVDGYIKLFRAINPLVPPTGLVRTPCGVCPIFHECHEGGDISPETCVYMTEWM 312 The following BLAST results are available for this feature:
BLAST of Ggra5063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5063.t1 ID=Ggra5063.t1|Name=Ggra5063.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bpback to top |