Ggra5055.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5055.t1
Unique NameGgra5055.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length432
Homology
BLAST of Ggra5055.t1 vs. uniprot
Match: A0A2V3J6T4 (Exostosin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6T4_9FLOR)

HSP 1 Score: 520 bits (1339), Expect = 1.000e-180
Identity = 243/439 (55.35%), Postives = 322/439 (73.35%), Query Frame = 0
Query:   12 AKSSRRTLNQTFFLLAMLAIGLLYALFGTKTNHMLRIS--------------------IGNRAHHQKYNNIQNNMFQISIPKLKPQALENNHRTLFLLPNKENSCTWQYNYVCKFWFYVRCYVFSAFPNVRMLSEGSQGLEDLKQQAKEGDIAIVIWRSRKHLEFPNNLGQLLEWQQSASQTNHTPRLRVGVLHVANEVNRTSWQWYLKPHFIIRNYWIPDMPAHATYIPLGPQFPNQCKPWATDDDVWMSDGKQPPCSCNKFSFPRASSRKYLWHFSGSLRKRRSRLVKMLRSSKSLKSKGYIQVSKKFGGEGQFGSKKSDNPKTEYLKSILDSQFVFAPCGNAMETHRIYEAIALGAIPVIENCQQELSYFFPFRELLIDGDVDNMIEFVKRFKDKQDEIDLLQQRVQQWWRQYSIDFAQNVSKTITQHVPPSKRTA 430
            +KSSRRT NQ FFLL +L IG+L  +FGTK    ++ +                    I +    Q Y ++++   ++  P ++ +++ N  RT++++P  EN C ++YNYVCKFWF++RCYVFSAFP V+MLS G  G+ DLK+ AK GDIA+V+WRS+KH E PNNL ++LEWQ +    ++ PR+RVGV H+ANEVNRT W WY K  FI+RNYW+PDMP H TY+PLGPQ PN C+PW+T+ D WM+  +QP C C   S P  S RKYLWHFSGSLRK+R RLV+ML SS SL +KGY+Q++KKFGG+G+FG+ K++NPKT YL+SIL S+FVFAPCGNAMETHRIYEA+ALGAIPVIENC   +S+FFPFREL++D  ++NM++FV+++ D  +EID LQQR+  WW QY  +FA NVS+ ++ HVP S RTA
Sbjct:    7 SKSSRRTHNQAFFLLGLLVIGVLVGIFGTKYKEAVKETKRTETISFLELDESSQRENKIESAEFPQPYESVESTS-KVVTPNVQEESIRNERRTVYVVPGNENRCFFRYNYVCKFWFFIRCYVFSAFPRVKMLSFGPAGVGDLKRLAKNGDIAVVLWRSKKHKEVPNNLDEILEWQSTFGLVDNVPRIRVGVFHIANEVNRTFWPWYTKADFIVRNYWVPDMPKHVTYVPLGPQLPNSCQPWSTEHDRWMNPPRQPCCKCKSLSLPPLSKRKYLWHFSGSLRKQRKRLVRMLESSPSLSTKGYLQIAKKFGGDGEFGT-KANNPKTAYLQSILSSKFVFAPCGNAMETHRIYEAVALGAIPVIENCDDPVSHFFPFRELVVDPPLENMLQFVEQYADDNEEIDKLQQRLLSWWAQYMNEFAVNVSRVMSTHVPVSLRTA 443          
BLAST of Ggra5055.t1 vs. uniprot
Match: A0A0C1V9U8 (Uncharacterized protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1V9U8_9CYAN)

HSP 1 Score: 70.5 bits (171), Expect = 1.150e-9
Identity = 64/219 (29.22%), Postives = 99/219 (45.21%), Query Frame = 0
Query:  142 DIAIVIWRSRKHLEFPNNLGQLLEWQQSASQTNHTPRLRVGVLHVANEVNRTSWQWYLKPHFIIRNYWIPDMP--AHATYIPLGPQFPNQCKPWATDDDVWMSDGKQPPCSCNKFSFPRA-SSRKYLWHFSGSLRKRRSRLVKMLRSSKSLKSKGYIQVSKKFGGEGQFGSKKSDNPKTEYLKSILDSQFVFAPCGN-AMETHRIYEAIALGAIPVIEN 356
            D AIVI R       P     + ++ Q   Q  +    RVGVLH+++E   +   +Y +  F+ RN++ PD+    H  ++P+G                     KQ     +K++  R    R+Y W F+G L  + SR   M ++        Y+       G+G   SK  D     Y++ I D+ FV AP GN   ET R YEA+ +GAIP++E+
Sbjct:   69 DHAIVITRGD-----PQGTTSVKDYLQRFKQQGY----RVGVLHLSDEWFTSPVDFYAEADFVFRNFYRPDVAHLPHVLFVPVGY--------------------KQ---GLHKYTVERPIRDRQYYWSFAGQLGGKVSRRAMMEQAQNIPGGIAYV-------GKGYNDSK--DLSFEGYVELICDTVFVLAPAGNRCAETSRFYEALEVGAIPIVED 246          
BLAST of Ggra5055.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI00194F0909 (hypothetical protein n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI00194F0909)

HSP 1 Score: 69.3 bits (168), Expect = 2.770e-9
Identity = 54/181 (29.83%), Postives = 88/181 (48.62%), Query Frame = 0
Query:  180 RVGVLHVANEVNRTSWQWYLKPHFIIRNYWIPDMP--AHATYIPLGPQFPNQCKPWATDDDVWMSDGKQPPCSCNKFSFPRA-SSRKYLWHFSGSLRKRRSRLVKMLRSSKSLKSKGYIQVSKKFGGEGQFGSKKSDNPKTEYLKSILDSQFVFAPCGN-AMETHRIYEAIALGAIPVIEN 356
            ++GVLH+++E   +   +YL+  F+ RN++ PD+    H  ++P+G                     KQ     +K++  R  S R+Y W F+G L  + SR   M ++        Y+       G+G   S+  D     Y++ I D+ FV +P GN   ET R YEA+ +GAIPV+E+
Sbjct:   98 QIGVLHLSDEWFTSPVDFYLEADFVFRNFYRPDVAHLPHVLFVPVGY--------------------KQ---GLHKYTVERPISDRQYYWSFAGQLGGKVSRRAMMEQAQNIPGGIAYV-------GKGYNDSQ--DLSFEGYVELICDTVFVLSPAGNRCAETSRFYEALEVGAIPVVED 246          
BLAST of Ggra5055.t1 vs. uniprot
Match: A0A1W0X4N1 (Transmembrane protein 5 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X4N1_HYPDU)

HSP 1 Score: 59.3 bits (142), Expect = 6.850e-6
Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 0
Query:  261 SRKYLWHFSGSLRKRRSR--LVKMLRSSKSLKSKGYIQVSKKFGGEGQFGSKKSDNPKTEYLKSILDSQFVFAPCGNAMETHRIYEAIALGAIPVIENCQQELSYFFPFREL-------LIDGDVDNM---IEFVKRFKDKQDEIDLLQQR--VQQWWRQYSIDFAQN 414
            +R YL HF G++    SR  L+K L ++  LK K YIQV   +  +  + S       T+Y K++  S  V +P G   E +R+YEA+++G++PVIE+ +       P+R L       +  GD D +   +E++    D +    LL QR  + +W++++ +    N
Sbjct:  265 TRPYLCHFMGTVYSNNSRVDLMKALDTT-PLKKKCYIQVRYDWPEQETYQS------ATDYAKTLQQSDSVLSPVGMNSECYRVYEALSVGSLPVIEDQKAPGVCDTPYRLLREYNVPAMFIGDWDELPGILEYLTSLSDTE----LLHQRNKIIKWYQKFLLSMRDN 421          
The following BLAST results are available for this feature:
BLAST of Ggra5055.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6T41.000e-18055.35Exostosin domain-containing protein n=1 Tax=Gracil... [more]
A0A0C1V9U81.150e-929.22Uncharacterized protein n=3 Tax=Cyanobacteria TaxI... [more]
hypothetical protein n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI00194F09092.770e-929.83hypothetical protein n=1 Tax=Halomicronema sp. CCY... [more]
A0A1W0X4N16.850e-629.76Transmembrane protein 5 n=1 Tax=Hypsibius dujardin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15576RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1coord: 149..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..431
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:354269..355564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5055.t1Ggra5055.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 354269..355564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5055.t1 ID=Ggra5055.t1|Name=Ggra5055.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=432bp
MAHITHKYDLHAKSSRRTLNQTFFLLAMLAIGLLYALFGTKTNHMLRISI
GNRAHHQKYNNIQNNMFQISIPKLKPQALENNHRTLFLLPNKENSCTWQY
NYVCKFWFYVRCYVFSAFPNVRMLSEGSQGLEDLKQQAKEGDIAIVIWRS
RKHLEFPNNLGQLLEWQQSASQTNHTPRLRVGVLHVANEVNRTSWQWYLK
PHFIIRNYWIPDMPAHATYIPLGPQFPNQCKPWATDDDVWMSDGKQPPCS
CNKFSFPRASSRKYLWHFSGSLRKRRSRLVKMLRSSKSLKSKGYIQVSKK
FGGEGQFGSKKSDNPKTEYLKSILDSQFVFAPCGNAMETHRIYEAIALGA
IPVIENCQQELSYFFPFRELLIDGDVDNMIEFVKRFKDKQDEIDLLQQRV
QQWWRQYSIDFAQNVSKTITQHVPPSKRTAP*
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