Ggra5046.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5046.t1
Unique NameGgra5046.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length281
Homology
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A2V3J6S4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6S4_9FLOR)

HSP 1 Score: 403 bits (1036), Expect = 1.070e-139
Identity = 222/280 (79.29%), Postives = 256/280 (91.43%), Query Frame = 0
Query:    1 MNSVTRPQTAFLTMSAAPMSRRSALRLAGLSFAAICAPRPIQPAFALKPGKPSKEKLLQGLREEKTPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGNNNSALYRKNKTVQEVAAGQR 280
            M++   P +AF+TMSAAP+SRR+ALRLAGLS AA+CAPRPI PA+ALKPGKPSKEKLLQG+REEKTPEEIEEEKAR+AXXXXXXXXXXXXXXXXXX +KAGL+DD     EIESNLRGQYY+PTARKRYLPRV+LAW++LP  +KAA ES WP VS++S GEL++A+LPMKLYASSLAGGGLSINAKFIE MN +TD+YERA+KQL++A KRKDT+VALGTLTDMR AI+KYR+LGHLEA DFGIGE+PTD+RVGSGFGNNNSALYRKNK++QEVA GQR
Sbjct:    1 MDATPLPHSAFMTMSAAPVSRRNALRLAGLSLAALCAPRPIGPAYALKPGKPSKEKLLQGIREEKTPEEIEEEKARIAXXXXXXXXXXXXXXXXXXXRKAGLEDDNSKGTEIESNLRGQYYYPTARKRYLPRVRLAWEVLPDVQKAAKESAWPVVSNYSTGELSDAVLPMKLYASSLAGGGLSINAKFIEAMNKETDMYERALKQLSRAVKRKDTTVALGTLTDMRDAISKYRELGHLEAADFGIGEVPTDSRVGSGFGNNNSALYRKNKSMQEVAIGQR 280          
BLAST of Ggra5046.t1 vs. uniprot
Match: K8YPZ8 (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YPZ8_NANGC)

HSP 1 Score: 168 bits (425), Expect = 1.780e-47
Identity = 92/220 (41.82%), Postives = 133/220 (60.45%), Query Frame = 0
Query:   49 PGKPSKEKLLQGLREEKTPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGNNNSALYRK 268
            P  PSK +LL+  R  K  E+  E+KAR+A                   +K   +D  + E +I++NLR  YY+PTA+KRYLPRVK A D LP A +A    +W  V  ++A E  NA LP+KLYASSL G GLS++  +++ ++ Q D+Y + ++   KA K +DT+ AL +L  M SA+  YR+   ++  D G+GE PTDT++G+ FGNNN  LY+K
Sbjct:   43 PSGPSKAELLEKTRA-KDSEDPVEKKARLAALRKERLERQRQLDAEEEARK---KDPNRKEVDIDANLRASYYYPTAQKRYLPRVKAAADALPAAREALQAGEWEKVESYAAKEADNAALPLKLYASSLTGQGLSLDVSYVKVLSQQGDVYGKELENFKKAVKSRDTTKALTSLGKMESALVLYRKTARIDKEDGGVGEFPTDTKLGASFGNNNPTLYKK 258          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A7S1XHI2 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHI2_9RHOD)

HSP 1 Score: 153 bits (386), Expect = 1.660e-42
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 0
Query:  107 QNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGNNNSALYRKN 269
            ++E EI++NLR  YYFPTARKRYLPRVK A D +P A   A  + +  +   +     +A+ P+KLYAS+L G GLS++  +++ M  +++ +E A+ +L KA K++D++     + D+ S++T YR  G +  PD G+GEIPTD RVGSGF NNN  LY+KN
Sbjct:   23 KSEVEIDANLRANYYFPTARKRYLPRVKAAADAMPDAVAYAESNSFDELGKLANSVFDDAVGPLKLYASALTGQGLSLSVSYVKDMTRESEQFEAALGRLKKALKKRDSAGTRAAVRDLDSSLTSYRIAGRINTPDGGVGEIPTDKRVGSGFANNNPVLYQKN 185          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A5J4YPF4 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPF4_PORPP)

HSP 1 Score: 157 bits (397), Expect = 2.780e-42
Identity = 103/262 (39.31%), Postives = 148/262 (56.49%), Query Frame = 0
Query:   21 RRSALRLAGLSFAAICAPRPIQPAFALKPGKPSKEKLLQGLREEK---TPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDT-RVGSGFGNNNSALYRKNKTVQEVAAG 278
            RR+ L LAG   A +      Q    L   K SKE+L+Q L++ K   +PEEIEE++A +A                  ++    Q ++  E++I SNLRG YYF T + RYLPR+KLA D +P  E+A     W   S    G + +A+LP++LY SSL+G GLS++  F + M +  D+YE  +K+L  A K+KD + A  +  ++  A+ KYR    +  PD GIGEI  DT RVGSGF NNN ALY +   +++V+ G
Sbjct:   86 RRALLSLAGAVGAVMIDGSLFQARAELALPK-SKEELMQELQQSKKKLSPEEIEEKRAALAEERKRRLERI--------KEFEAEQKEKSRESQIGSNLRGNYYFNTNKLRYLPRIKLANDEMPALERALANQDWAEASRLVNGSIDDALLPLRLYTSSLSGQGLSLSVSFAKDMAASADVYEANLKKLKTAIKKKDAAKANASYQELNDALQKYRVAAKINTPDGGIGEISIDTPRVGSGFSNNNPALYMRG-AMKKVSNG 337          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A7S3AAF7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAF7_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 2.340e-40
Identity = 101/218 (46.33%), Postives = 137/218 (62.84%), Query Frame = 0
Query:   43 PAFALKPGKPSKEKLLQGLREEKTPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGN 260
            PAFA    K S+E+L++ L+ +K+PEE+EEE+A  A      XXXXXXXXXXXX        D   E+EI++NLR  YYFPTARKRYLPRVK   D +  A  A  +  W  + +F+ G   NA  P+KLYASSLAG GLS+   ++E M    D Y+  ++ L KA K+K    A  +  +M +A+ +YR+   ++ PD G+GEIP+D R+GSGF N
Sbjct:  131 PAFAGVLPK-SREQLMEDLKSKKSPEELEEERAAKADARRQRXXXXXXXXXXXXXXXXXGSAD--VESEIDANLRANYYFPTARKRYLPRVKECADKIDDARDALAKKDWAKLQEFAEGAADNASGPLKLYASSLAGQGLSLKVSYVEDMTKYADTYDVQLQNLKKAIKKKKIDGATKSFEEMANALEQYRKAARIDTPDGGVGEIPSDKRLGSGFSN 345          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A0G4E920 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4E920_VITBC)

HSP 1 Score: 135 bits (341), Expect = 6.420e-35
Identity = 84/222 (37.84%), Postives = 120/222 (54.05%), Query Frame = 0
Query:   53 SKEKLLQGLREEKTPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGNNNSALYRKNKTVQE 274
            +K++L++    EKTPEEIE EK  +A                         ++ + E  IE  L  QY +PTARKRYLPRVK   D +          +W  V  F+ G    A LP+KLYASSLAG GL+ +A FI+ MN + + Y  ++    KA  +KDT+ AL +L  M ++++ YR+ G ++  D G+G + +  R GSGF NNN  LY+KN +  E
Sbjct:   36 AKDELVKKTMREKTPEEIEAEKEALAQAKRERLEKQKRLV----EXXXXXXEEGEQEEGIEPTLYVQYTYPTARKRYLPRVKALADEIGGIAPLVEAGKWGKVKTFAEGTAEGARLPLKLYASSLAGQGLAQSASFIKVMNKEAEEYSASLDSFQKAVNKKDTNTALVSLAKMSTSLSTYRREGKIDTEDGGVGRVESQPR-GSGFFNNNPGLYQKNLSALE 252          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A1X6P7V2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7V2_PORUM)

HSP 1 Score: 132 bits (331), Expect = 1.010e-32
Identity = 74/160 (46.25%), Postives = 103/160 (64.38%), Query Frame = 0
Query:  112 IESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSA--GELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPTDTRVGSGFGNNNSALYRKN 269
            IE  LRG YY PTA+ RYLPRV+ A + L  A  AA +  W A++  +A  G L +A  PM+LYASSLAG GLSI ++  + M++  + Y  A+ +LAK AK++        L D+R+A+  YR+ G +EA D+G+ EI T  +VG+ FGNNN ALY +N
Sbjct:   87 IEPTLRGSYYSPTAKLRYLPRVRRAAESLDEAVVAAADGNWAALAALAAPTGALGDAAAPMRLYASSLAGQGLSIASRAAKEMDAAGEAYAGAIAKLAKGAKKRSPGTVGPALDDLRAAMGAYRRAGRMEA-DWGLSEITTTQKVGAAFGNNNPALYARN 245          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A7S4UWB8 (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UWB8_GUITH)

HSP 1 Score: 129 bits (323), Expect = 1.110e-31
Identity = 89/222 (40.09%), Postives = 118/222 (53.15%), Query Frame = 0
Query:   66 TPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQ--WPAVSDFSAG--ELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGH---LEAPDFGIGEIP-----------TDTRVGSGFGNNNSALYRKN 269
            T E IEE KAR+A         X        + KA  +++   + E+ SNLRG YYFPTARKRYLPRVK A+D L    +   E+   W  V  F+ G  ++T A   MKLY S+L GGGLSI +KF+E M    D Y+R  K   +A  +KD+S A+     M+SA+  YR  G    L++ D+G+G IP           +   VGS F N N  LY +N
Sbjct:  106 TVETIEERKARIAKEREEMEKRXQELDQ---KAKAFEEENGPVQVEMGSNLRGDYYFPTARKRYLPRVKGAYDGLQETIQTIQEASPDWKTVEQFAKGPADVTGA---MKLYVSALGGGGLSIQSKFMEAMGKAADEYDRDYKDFKQAVSKKDSSKAVSIAKSMQSALLAYRSAGKPAGLDSDDWGVGAIPECKKGVGVGKMSQCAVGSSFSNANPNLYSRN 321          
BLAST of Ggra5046.t1 vs. uniprot
Match: A0A7S0HCY5 (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HCY5_9CRYP)

HSP 1 Score: 126 bits (317), Expect = 8.310e-31
Identity = 102/276 (36.96%), Postives = 142/276 (51.45%), Query Frame = 0
Query:   12 LTMSAAPMSRRSALRLAGLSFAAICAPRPIQPAFALKPGKPSKEKLLQGLREEKTPEEIEEEKARVAXXXXXXXXXXXXXXXXXXRKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQ--WPAVSDFSAG--ELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGH---LEAPDFGIGEIP-----------TDTRVGSGFGNNNSALYRKN 269
            +TMS    SRRS L  A  +  ++       PA A K    ++ + L  +  + T E IEE KAR+A         XX       + KA  +++   + E+ SNLRG YYFPTARKRYLPRVK A+D L    ++  ES   W +V  F+ G  ++T A   MKLY S+L GGGLSI +KF++ M    D Y+R  K   +A  +KD S  +     M++++  YR  G    L++ D+GIG IP           +   VGS F N N  LY +N
Sbjct:   60 VTMSMQSTSRRSVLLAAAFTTGSVLL--KADPAAAKK----ARSQTL--VAPDGTVETIEERKARIAKEREEMEKRXXELDQ---KAKAFEEENGPVQVEMGSNLRGDYYFPTARKRYLPRVKGAYDGLEETIRSIQESSPDWQSVEQFTKGPADVTGA---MKLYVSALGGGGLSIQSKFMDAMGKAADEYDREFKDFKQAVSKKDPSKVISLAKSMQTSLLAYRTAGKPAGLDSDDWGIGAIPDCKKGLGVGKMSQCAVGSSFSNANPNLYSRN 321          
BLAST of Ggra5046.t1 vs. uniprot
Match: B7FXQ4 (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXQ4_PHATC)

HSP 1 Score: 117 bits (292), Expect = 1.480e-27
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   97 RKKAGLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATESQWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYERAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPT 250
            R+K   +   + E+++E NLR  YY+PT +KRYLPR+K   D +P A  A     W  V+DF+     + ILPM+LY SSL GGG ++   F + MN   D +E+A K+L KA  ++D   +   L D+ +A+  YR  G L  PD G G+IP+
Sbjct:   86 RQKVAARAVAKAESDVEPNLRANYYYPTNKKRYLPRIKRCNDAIPDAADAIGTGDWLVVTDFANKIADDTILPMRLYTSSLVGGGTNVKVAFAKEMNKAADDFEKAQKKLVKATAKQDREASSVALEDLATALQTYRVAGKLLGPDGG-GDIPS 238          
The following BLAST results are available for this feature:
BLAST of Ggra5046.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6S41.070e-13979.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
K8YPZ81.780e-4741.82Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S1XHI21.660e-4245.40Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YPF42.780e-4239.31Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3AAF72.340e-4046.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4E9206.420e-3537.84Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A1X6P7V21.010e-3246.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S4UWB81.110e-3140.09Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0HCY58.310e-3136.96Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
B7FXQ41.480e-2740.26Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 38..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..46
score: 8.159937

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:329992..330834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5046.t1Ggra5046.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 329992..330834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5046.t1 ID=Ggra5046.t1|Name=Ggra5046.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=281bp
MNSVTRPQTAFLTMSAAPMSRRSALRLAGLSFAAICAPRPIQPAFALKPG
KPSKEKLLQGLREEKTPEEIEEEKARVAEEKKQRLAKQRELQAAAERKKA
GLQDDRQNEAEIESNLRGQYYFPTARKRYLPRVKLAWDMLPMAEKAATES
QWPAVSDFSAGELTNAILPMKLYASSLAGGGLSINAKFIEGMNSQTDLYE
RAVKQLAKAAKRKDTSVALGTLTDMRSAITKYRQLGHLEAPDFGIGEIPT
DTRVGSGFGNNNSALYRKNKTVQEVAAGQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal