Ggra5015.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5015.t1
Unique NameGgra5015.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length610
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5015.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..609
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..68
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:59446..61275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5015.t1Ggra5015.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 59446..61275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5015.t1 ID=Ggra5015.t1|Name=Ggra5015.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=610bp
MDINRIYDEEVKKYEEERTKCEDVAFVEKQTPTGKSYKRALGASATWYVM
ALGFSVVMNYGLGAAVAGTIATPILGVLGTIAVVAGVVTTLTSGAANVVR
HAGLGWAPYTFNRNYVEKTFKSSNTRNIRQAAAYVAYTKAILQHKATDEN
QGSDFFKMKISMMDLSIHGDDEKAKRMTFYSQLGKAISEGDANPWLKASE
GVVSSQISQVVLRGLSRIMNANNLTESVDCLLDDVNWKSLGKKKSPMTGK
YIDPEENIPYVALSYKQEGDTFKLGRSQARQAVERAALIAESLTGKKEFR
IWVDQLVHGGGQEWVAIGLLPYLLMPVVQTDQAISYTAPRSREESTWISL
EPINALLRYWQMRGVRTDQASYTAPRSRKESTWISLEHICASAATTTQLT
KTGIFIDLANTRPLSESLSAVAEVLSWHLRSDRIHSTIRESDESWLSLWC
KGVLHGRQTEYMYEGIREELGADHNLLAGGKKWSFAMAARTLNCTGNALM
TRYLASKRKAERLTWTDECLLLSEAPMMVHREKLREASSFVEGIRDERKY
LLVMTDFCNYEVWTEVEVSERNGVYRPLVVKHANQEVLRSWQDLLETSTR
TPLKDLQIE*
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