Ggra4934.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4934.t1
Unique NameGgra4934.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length579
Homology
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH11 (Prolycopene isomerase n=2 Tax=Gracilariaceae TaxID=31469 RepID=A0A2D2AH11_9FLOR)

HSP 1 Score: 995 bits (2572), Expect = 0.000e+0
Identity = 489/580 (84.31%), Postives = 534/580 (92.07%), Query Frame = 0
Query:    1 MSSPAFVSPLPVRP--SLNQKASPSKRPKYQLRATAQPVRSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPGINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSEGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            MSS  F + +P RP  SL+Q  S + RP+ QLRATAQ VR+PT P    + VDVVVIGSG+GALTAAADL+SKGASVCVLEKYLIPGGSSGYF RDGY FDAGASMIFGFG+RGTTNLLTRAL+TVGR+LETIPDPVQVRYHLPGI+IRV+R+YE FL ELIK FPSEE+GIRKFYGECWNVFN+LNAMPLRSLEEPNYL RVFFAHP+ CL+LLRYIARNAG++ARKHI D++LLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIE KPGCSVQ+ SRV ++LFS GRA GVKLA+G EI AKAVISNATRWDTFG  GLVD +HVP AEYRFR+RY+KSPSFCSMHIAVRE DL VSM E+DGMDCHHIMLDDWNELETARDGKGTLFVS+PTVLDKSLAPEGMHIFHVFTPSW+DEW+GLS+++Y +KKQ ML+  TERLERTLFPGL+GA+EFAEVGSP+THRRFLGR+DGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLI KLP+PLDSFLTDLLSKQRL+L
Sbjct:    1 MSSLGFTASIPFRPFSSLHQ-VSTTTRPENQLRATAQSVRAPTRPTTAAQDVDVVVIGSGMGALTAAADLSSKGASVCVLEKYLIPGGSSGYFVRDGYTFDAGASMIFGFGQRGTTNLLTRALQTVGRKLETIPDPVQVRYHLPGIDIRVYRDYERFLSELIKVFPSEERGIRKFYGECWNVFNALNAMPLRSLEEPNYLFRVFFAHPIPCLNLLRYIARNAGDVARKHIKDENLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEDKPGCSVQFGSRVTQILFSGGRASGVKLANGCEIKAKAVISNATRWDTFGEHGLVDAKHVPTAEYRFRDRYVKSPSFCSMHIAVRECDLGVSMREEDGMDCHHIMLDDWNELETARDGKGTLFVSVPTVLDKSLAPEGMHIFHVFTPSWMDEWEGLSSKEYEMKKQAMLQSATERLERTLFPGLRGAMEFAEVGSPRTHRRFLGRVDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLISKLPDPLDSFLTDLLSKQRLRL 579          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH24 (Prolycopene isomerase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2D2AH24_GRALE)

HSP 1 Score: 939 bits (2426), Expect = 0.000e+0
Identity = 459/575 (79.83%), Postives = 511/575 (88.87%), Query Frame = 0
Query:    4 PAFVSPLPVRPSLNQKASPSKRPKYQLRATAQPVRSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPGINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSEGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            PAF+ P P+    N   S +K  ++ + A+AQ   +P++ K ++  VDVVVIGSGIGALTAAADLASKGASV VLE+YLIPGGSSGYF RDGY FDAGASMIFGFGERGTTNLLTRAL  VGR+ ET+ DPVQVRYHLPGINIRVH++YE FL+ELI+RFP+EE GIR FY ECW+VFNSLNAMPLRSLEEPNYLLRVFFAHPL CL+LLRYIARNAG+IARKHI+DKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVG+ISQELV+GIE KPGC V+Y +RV +V F   RACGV+LA+GS I A+AVISNATRWDTFG  GLV+ +HVP +E+RFRERY+KSPSFCS HIAVRE DL VSM E DGMDCHHIMLDDWNELETA DGKGTLFVSIPTVLDKS+APEG HIFHVFTPSW+DEW GLS +DY  KKQ +LE++ +RLERTLFPGLK AIEFAEVGSP+THRRFLGR+DGSYGPVAKKKL+GLLSMPFNRT++DGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLI  LP+P+DSFLTDLLSK RL+L
Sbjct:    4 PAFLLPSPLHLRFNSSVSRNKLRRHVI-ASAQSHTAPSIQKTESSDVDVVVIGSGIGALTAAADLASKGASVGVLERYLIPGGSSGYFVRDGYTFDAGASMIFGFGERGTTNLLTRALACVGRKQETVADPVQVRYHLPGINIRVHQQYERFLEELIQRFPAEENGIRSFYAECWSVFNSLNAMPLRSLEEPNYLLRVFFAHPLPCLNLLRYIARNAGDIARKHISDKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGKISQELVRGIEDKPGCWVRYGARVTRVFFEGDRACGVQLANGSVITARAVISNATRWDTFGERGLVESQHVPPSEHRFRERYVKSPSFCSAHIAVRETDLRVSMREDDGMDCHHIMLDDWNELETAHDGKGTLFVSIPTVLDKSIAPEGKHIFHVFTPSWMDEWQGLSKQDYEAKKQSILELMIDRLERTLFPGLKEAIEFAEVGSPRTHRRFLGRVDGSYGPVAKKKLKGLLSMPFNRTDVDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIETLPKPVDSFLTDLLSKTRLQL 577          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH47 (Prolycopene isomerase n=3 Tax=Gigartinaceae TaxID=29217 RepID=A0A2D2AH47_CHOCR)

HSP 1 Score: 862 bits (2228), Expect = 3.360e-311
Identity = 423/573 (73.82%), Postives = 486/573 (84.82%), Query Frame = 0
Query:    8 SPLPVRPSLNQKASPSKRPKYQLRATAQPVRSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPG-INIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFS-EGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            +P   R +L++K    +RP+  +   +    S   P    + VD V IGSG+GALTAAADLASKGASV VLE Y+IPGGSSG+F R G+ FDAGASMIFGFGERGTTNLLTRAL TVG+R+ T+PD VQVRYHLP  ++I+VHREY+ FL+ LIKRFP EEKGIRKFYG CW+VFNSLN MPLRSLEEPNYLL+VF AHP+ACL+LLR+I RNAG+IAR HI D+ LL+FIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGV RIS+E+V GIE   GCSV ++++V K+LF   G ACGVKL +G  ++AKAVISNATRWDTFG  GLV+ E VP +E RFRERY+KSPSFCS+H+AVRE DLEV M EK+GMDCHHIMLDDW+E+ETARDGKGTLF+SIPTVLDKSLAP GMHIFHVFTPSW+DEW+GLS E Y  KK  MLE +  RLE+ LFPGL+ AIEF+EVGS +THR++LGR+DGSYGPVAKKKLRGLLSMPFNRT++DGLYCVGDSTFPGQGLNATAFSGFAC HRVAADLG+IG LP P+D FLTDLLS+QRLKL
Sbjct:   15 APCVPRAALDRKQG--RRPRASVARASNLTSSKKTPAPLPEAVDAVFIGSGMGALTAAADLASKGASVAVLESYIIPGGSSGWFERKGFRFDAGASMIFGFGERGTTNLLTRALATVGKRIATVPDAVQVRYHLPDELDIKVHREYDEFLEGLIKRFPHEEKGIRKFYGACWSVFNSLNCMPLRSLEEPNYLLQVFAAHPIACLNLLRFIGRNAGDIARDHIKDETLLKFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVERISEEIVAGIEECDGCSVHFRAKVKKILFDGTGAACGVKLVNGRTVSAKAVISNATRWDTFGEKGLVEAERVPPSEERFRERYVKSPSFCSLHMAVREKDLEVGMSEKEGMDCHHIMLDDWDEIETARDGKGTLFISIPTVLDKSLAPPGMHIFHVFTPSWVDEWEGLSGEKYRAKKAAMLETIVARLEKKLFPGLQSAIEFSEVGSARTHRKYLGRVDGSYGPVAKKKLRGLLSMPFNRTDVDGLYCVGDSTFPGQGLNATAFSGFACAHRVAADLGIIGSLPGPIDRFLTDLLSRQRLKL 585          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH41 (Prolycopene isomerase n=1 Tax=Dumontia simplex TaxID=142491 RepID=A0A2D2AH41_9FLOR)

HSP 1 Score: 861 bits (2224), Expect = 1.360e-310
Identity = 425/582 (73.02%), Postives = 488/582 (83.85%), Query Frame = 0
Query:    5 AFVSPLPVRPSLNQKASPSK-RPKYQLRATAQPVRSPTLPK-----ADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLP-GINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSE-GRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            +F++PLP+ P + Q    S  R  +     A    +  +P+     A  + VDVVVIGSG+GALTAAADLASKGASV VLE+YLIPGGSSGYF R GY FD GASMIFGFG RGTTNLLTRAL+ V RR++TIPDPVQVRYHLP GI+IRVHR+YE FL EL++RFP EEKGIR FY  CW+VFNSLNAMPLRSLEEP YLLRVF AHPLACL+LLR++ RNAG+IAR+HI D++LL+FIDMECYSWSVVPA+LTPMINAGMVFSDRHYGGINYPVGGVGRI++E+V+GI  + GC+V+Y + V KVLF E G ACGVKLA+G+ I AKAVISNATRWDTFG  GLVDEE  P AE RFRERY+KSPSF S HIAVRE +L+V M E DGMDCHHI+LDDW E+ETARDG+GT+F+SIPT+LDKS+AP GMHIFHVFTPSW+DEW GLS+  Y  KK+ ML  V +RLER LFPGL  AIEFAEVGSP+THR++LGRIDGSYGPVA K+L GLLSMPFNRT++ GLYCVGDSTFPGQGLNATAFSGFACGHRVAADLG + +LPEP DS LTDLLS+ RLK+
Sbjct:    4 SFIAPLPIPPGVRQVGGRSSCRNSHFTTPVASAANAARIPRTVAQQATERTVDVVVIGSGMGALTAAADLASKGASVAVLERYLIPGGSSGYFERPGYRFDVGASMIFGFGTRGTTNLLTRALDAVDRRVDTIPDPVQVRYHLPDGIDIRVHRDYEQFLQELVRRFPHEEKGIRSFYNACWSVFNSLNAMPLRSLEEPRYLLRVFAAHPLACLNLLRFLTRNAGDIAREHIVDENLLKFIDMECYSWSVVPANLTPMINAGMVFSDRHYGGINYPVGGVGRIAEEIVEGIRSREGCTVEYGALVTKVLFDERGSACGVKLANGNRIYAKAVISNATRWDTFGDKGLVDEERTPVAERRFRERYVKSPSFFSCHIAVREKNLKVGMGEDDGMDCHHIVLDDWKEIETARDGRGTIFLSIPTILDKSVAPPGMHIFHVFTPSWMDEWKGLSSSAYKAKKETMLSTVVKRLERELFPGLGEAIEFAEVGSPRTHRKYLGRIDGSYGPVAGKRLAGLLSMPFNRTDVKGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGFLERLPEPFDSALTDLLSRTRLKI 585          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH17 (Prolycopene isomerase n=1 Tax=Ahnfeltiopsis flabelliformis TaxID=38507 RepID=A0A2D2AH17_9FLOR)

HSP 1 Score: 854 bits (2207), Expect = 5.260e-308
Identity = 416/545 (76.33%), Postives = 476/545 (87.34%), Query Frame = 0
Query:   36 PVRSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLP-GINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSE-GRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            P + P  P  +  +VDVVV+GSG+GALTAAADLASKGASV VLE YLIPGGSSG+F R G  FD GASMIFGFG RGTTNLLTRAL TVGR +ETIPDPVQVRYHLP G+++RVHR+YE+FL EL+K+FP EEKGIRKFYG+CW+VFNSLNAMPL+SLEEPNYLL+VF AHP+ACL+LLR+IARNAG+IARK I D+ LL+FIDMECYSWSVVPA+LTPMINAGMVFSDRHYGGINYPVGGVGRI++E+VQGIE   GCSV Y +RV K+LF E G A GV+L DGS + AKAVISNATRWDTFG  GLV+E+ +P++E RFRERY+KSPSFCS+H+AVRE DL+V M E +GMDCHHIMLD+W E+ETA  GKGTLFVSIPTVLDKSLAP G+HIFHVFTPSW+DEW GLS  +Y  KK+ +  ++ ERLER LFPGL  AIEF+EVGS +THRRFLGR+DGSYGPVA KKL GLLSMPFNRTE+ GLYCVGDSTFPGQGLNATAFSGFACGHRVAADL +I KLP+P+D FLTDLLSK+RL+L
Sbjct:   43 PTKKPHSPLPN--NVDVVVVGSGMGALTAAADLASKGASVAVLESYLIPGGSSGWFERHGCRFDVGASMIFGFGNRGTTNLLTRALATVGRSVETIPDPVQVRYHLPAGLDVRVHRDYELFLAELVKKFPHEEKGIRKFYGDCWSVFNSLNAMPLKSLEEPNYLLKVFAAHPIACLNLLRFIARNAGDIARKFIKDETLLKFIDMECYSWSVVPAELTPMINAGMVFSDRHYGGINYPVGGVGRIAEEIVQGIEDYSGCSVHYGARVRKILFDEKGTARGVQLVDGSNVYAKAVISNATRWDTFGENGLVEEDDIPSSERRFRERYIKSPSFCSVHMAVREKDLKVGMSEGEGMDCHHIMLDNWQEIETATGGKGTLFVSIPTVLDKSLAPPGIHIFHVFTPSWMDEWRGLSTAEYEAKKEAIRHIIVERLERKLFPGLSNAIEFSEVGSARTHRRFLGRVDGSYGPVAGKKLAGLLSMPFNRTEVPGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLDIIDKLPDPIDRFLTDLLSKRRLQL 585          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH12 (Prolycopene isomerase n=1 Tax=Gloiopeltis furcata TaxID=42017 RepID=A0A2D2AH12_9FLOR)

HSP 1 Score: 846 bits (2186), Expect = 8.550e-305
Identity = 416/559 (74.42%), Postives = 470/559 (84.08%), Query Frame = 0
Query:   22 PSKRPKYQLRATAQPVRSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLP-GINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFS-EGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            P++RP+      + P           + VD V IGSG+GALTAAADLASKGASV VLE YLIPGGSSG+F RDG+ FD GASMIFGFGERGTTNLLTRAL TVG+RLET PDPVQVRYHLP GI+++VHREYE FL ELIK+FP E+KGIRKFY  CW+VFNSLN MPL+SLEEPNYLLRVF AHP+ACL+LLR+I RNAG+IAR HI D+ LL+FIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYP+GGVGRI++ELV GIE   GCSV + +RV KV+F   G ACG +L DG  ++AKAVISNATRW+TFG  GLV+ E VP +E RFRERY+KSPSFCSMHIAVRE DL+V+M E++GMDCHHIMLDDW E+ETARDGKGTLF+SIPTVLDKSLAP  MHIFHVFTPSW+DEW+GL   +Y  KK  ML  V  RLE+ LFPGL  AIEF EVGS +THRR+LGR+DGSYGPVA KKL GL+SMPFNRT++D LYCVGDSTFPGQGLNATAFSGFAC HRVAADLG+I  LP P+DSFLTDLLS+QRLKL
Sbjct:   28 PARRPRASATQASPPASVQKANAPLPQAVDAVFIGSGMGALTAAADLASKGASVAVLESYLIPGGSSGWFERDGFRFDVGASMIFGFGERGTTNLLTRALATVGKRLETKPDPVQVRYHLPDGIDVKVHREYEEFLAELIKKFPHEKKGIRKFYDACWSVFNSLNCMPLKSLEEPNYLLRVFAAHPIACLNLLRFIGRNAGDIARDHIKDETLLKFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPIGGVGRIAEELVAGIEECDGCSVHFGARVKKVVFDGAGAACGGQLVDGRTVSAKAVISNATRWNTFGEKGLVEAERVPQSEARFRERYVKSPSFCSMHIAVREKDLKVAMSEEEGMDCHHIMLDDWGEIETARDGKGTLFISIPTVLDKSLAPPDMHIFHVFTPSWMDEWNGLPYAEYQAKKDAMLNTVVARLEKKLFPGLNDAIEFYEVGSARTHRRYLGRVDGSYGPVAGKKLAGLMSMPFNRTDVDNLYCVGDSTFPGQGLNATAFSGFACAHRVAADLGIIATLPGPIDSFLTDLLSRQRLKL 586          
BLAST of Ggra4934.t1 vs. uniprot
Match: prolycopene isomerase, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFB48 (prolycopene isomerase, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFB48)

HSP 1 Score: 799 bits (2064), Expect = 3.170e-286
Identity = 394/531 (74.20%), Postives = 448/531 (84.37%), Query Frame = 0
Query:   50 VDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPG-INIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLF-SEGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            VDVVV+GSG+GALTAAADLA++GASV VLE+YLIPGGS+G+F R GY FD GASMIFG G+ GTTNLLTRAL TVGRR+++IPDPVQVRYHLP  I+IRVH++YE F+ EL+ RFP EE GIR+FYG CW+VF+SLNAMPL+SLEEP YLL VF AHPLACL+L+R++A NAG+IAR HIAD DLLRFIDMECYSWSVV ADLTPMINAGMVFSDRHYGGINYPVGGVG I++EL  GI   PGCSV Y +RV KVL  S+G ACGV LADGS I+A+ VISN+TRWDTFGG  LV EE VP  E RFRERY+KSPSFCS+H+ VRE+ L V M E  GMDCHHI+LDDW+ LE A + +GTLFVSIPTVLDKSLAP G HIFHVFTPSW+ EW+GLS  +Y  KKQ M E +  RLE  LFPGL GA+EF EVGS +THRRFLGR+DGSYGPVA K+L GLLSMPFNRT + GLYCVGDSTFPGQGLNA AFSGFACGHRVAADLGLIGKLP+  DS LT +LS+ RL++
Sbjct:   59 VDVVVVGSGMGALTAAADLAARGASVAVLERYLIPGGSAGHFERAGYRFDVGASMIFGLGDHGTTNLLTRALATVGRRVDSIPDPVQVRYHLPSHIDIRVHKDYEKFIAELVHRFPHEESGIRRFYGACWSVFDSLNAMPLKSLEEPAYLLEVFMAHPLACLNLVRFLAANAGDIARAHIADPDLLRFIDMECYSWSVVRADLTPMINAGMVFSDRHYGGINYPVGGVGHIAEELADGIRSCPGCSVHYGARVTKVLIGSKGEACGVALADGSCIDARVVISNSTRWDTFGG--LVPEESVPDDERRFRERYIKSPSFCSLHLGVRESKLRVDMSEAAGMDCHHILLDDWDNLERATNAEGTLFVSIPTVLDKSLAPPGCHIFHVFTPSWMTEWEGLSPTEYADKKQRMAESMIARLEAKLFPGLSGAVEFMEVGSARTHRRFLGRVDGSYGPVAGKRLPGLLSMPFNRTAVSGLYCVGDSTFPGQGLNAVAFSGFACGHRVAADLGLIGKLPKVFDSVLTGMLSRIRLRI 587          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH10 (Prolycopene isomerase n=1 Tax=Heterosiphonia pulchra TaxID=189631 RepID=A0A2D2AH10_9FLOR)

HSP 1 Score: 785 bits (2026), Expect = 2.730e-280
Identity = 386/578 (66.78%), Postives = 452/578 (78.20%), Query Frame = 0
Query:   11 PVRPSLNQKASPSKRPKYQLRATAQPV--------RSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLP-GINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSE-GRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            P  PSL    +P   P+    +  +P          SP   ++ +  VDVV+IGSG+GALT A DL  KG  V VLE+YLIPGGSS  F+R GY FD GASMIFG G  G+TNLLTRAL TVGR + +IPDPVQVRYHLP  +++ V R+YE FLD L   FP E  GIRKFY ECW+VFNSLN MPLRSLEEP YLL +F   PL C ++LR+IA NAG+IAR++I D+ LL+FID+EC+SWSVVPAD+TPMINAGMVFSDRHYGGINYP GGVGRI++E+V+GI    GC V+ ++ V  VLF   GRACGV+LA G EI A+AVISNATRWDTF  GGLV  EHVP AE RFR+RY+KSPSFCS HIAVRE DL+VSM  +DGMDCHHIMLD+W+++E A D +GTLFVSIPT+LDKS+APEGMHIFHVFTPSW+ EW GLS+++Y  KKQ ML+ +  RLER L  GL  AIEFAEVGSP+THRR+LGR+DGSYGPVA K+L GLLSMPFNRTE+DGLYCVGDSTFPGQGLNATAFSGFAC HRVAADLG I  LP+P+D +LT LL + RL L
Sbjct:   20 PFSPSLLPATTPQPSPRLPAPSXXRPCFLPAPISCASPATSESASPDVDVVIIGSGMGALTTAGDLCQKGLKVGVLERYLIPGGSSAQFSRPGYRFDVGASMIFGLGTEGSTNLLTRALATVGRAIPSIPDPVQVRYHLPDNLDVSVARDYETFLDNLSSLFPHERVGIRKFYDECWSVFNSLNLMPLRSLEEPRYLLSIFAKRPLTCFNVLRFIATNAGDIARRYIKDEKLLKFIDVECFSWSVVPADMTPMINAGMVFSDRHYGGINYPAGGVGRIAEEMVEGIREHEGCWVRLRANVKNVLFDHSGRACGVRLATGEEIRARAVISNATRWDTFDEGGLVPTEHVPEAENRFRDRYIKSPSFCSAHIAVREKDLKVSMRAEDGMDCHHIMLDNWDDMEVAEDARGTLFVSIPTILDKSIAPEGMHIFHVFTPSWMHEWKGLSSKEYKAKKQRMLDTMVSRLERELVEGLSSAIEFAEVGSPRTHRRYLGRVDGSYGPVAGKRLNGLLSMPFNRTEVDGLYCVGDSTFPGQGLNATAFSGFACAHRVAADLGFIETLPQPVDDWLTKLLGRWRLLL 597          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH15 (Prolycopene isomerase n=1 Tax=Betaphycus gelatinus TaxID=1191690 RepID=A0A2D2AH15_9FLOR)

HSP 1 Score: 773 bits (1995), Expect = 1.570e-275
Identity = 379/557 (68.04%), Postives = 453/557 (81.33%), Query Frame = 0
Query:   30 LRATAQPVRSPTLPKAD------TKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLP-GINIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSE-GRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            L A   P   P  P+ +      T+HVDV +IGSG+GALTAAA+L + GA+V VLEKYLIPGGS+G F R GY+FD GASMIFGFG +GTTNLLT+AL+ VGR+LETIPDPVQVRYHLP G+++RV+REYE FL+EL  +FP E +GIR+FY  CW+VF SLNAMPLRSLEEP YLL VF AHP+ACL+LLR+IARNAG++AR++I D+ ++RFIDMEC+++SV  ADL+PMINAGMVF DRHYGG+ YP GGVGRI++ELV+GIE + G  VQ+ +RV +V+F E GRACGVKLA G  I AKAVISNATRWDTFG  GLV    VP AE++FRERY+KSPSFCS HIAVRE DL+V M E  GMDCHHI+L+DW++ ETAR+G GTLFVSIPT+LDKS+APEGMHI HVFTPSW+DEW GL  ++Y  KK   L  +  R+E     GL  AIEFAEVG+P+THRRFLGR DGSYGP+A+K+L GLLSMPFNRTE+ GLYCVGDSTFPGQGLNATAFSG +CGHRVAADLGL  +LP  +D F++ LL K RL+L
Sbjct:   44 LNAATTPQPQPITPRRNSNRQPTTRHVDVAIIGSGMGALTAAAELVATGATVAVLEKYLIPGGSAGSFKRPGYVFDVGASMIFGFGSQGTTNLLTKALKKVGRQLETIPDPVQVRYHLPEGLDVRVYREYERFLEELGSKFPHEREGIRRFYDACWSVFGSLNAMPLRSLEEPRYLLEVFAAHPVACLNLLRFIARNAGDVARQYIRDERVIRFIDMECFTFSVATADLSPMINAGMVFCDRHYGGVRYPKGGVGRIAEELVKGIEEREGSWVQFGARVTEVVFDEEGRACGVKLATGDVIRAKAVISNATRWDTFGDKGLVRGARVPQAEWKFRERYVKSPSFCSAHIAVRERDLQVEMTEAGGMDCHHIVLEDWDKFETARNGDGTLFVSIPTILDKSIAPEGMHILHVFTPSWMDEWSGLPPDEYAAKKAASLSKMVRRIETAFCGGLSKAIEFAEVGTPRTHRRFLGRSDGSYGPMARKRLSGLLSMPFNRTEVQGLYCVGDSTFPGQGLNATAFSGVSCGHRVAADLGLARRLPRRVDQFVSGLLGKTRLEL 600          
BLAST of Ggra4934.t1 vs. uniprot
Match: A0A2D2AH18 (Prolycopene isomerase n=1 Tax=Melanothamnus japonicus TaxID=2608613 RepID=A0A2D2AH18_9FLOR)

HSP 1 Score: 766 bits (1979), Expect = 1.530e-273
Identity = 377/543 (69.43%), Postives = 444/543 (81.77%), Query Frame = 0
Query:   38 RSPTLPKADTKHVDVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDAGASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPG-INIRVHREYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLRVFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPADLTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSRVAKVLFSE-GRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPAAEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNELETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYNVKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGPVAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVAADLGLIGKLPEPLDSFLTDLLSKQRLKL 578
            RS     A    VDVVV+GSGIGALTAAADL SKGA+V VLE+YLIPGGS+G F R G+ FD GASMIFG G  GTTNLLTRAL+TV + +E+IPDPVQV YHLPG ++++V R+Y+ FLD LI  FP      R FY  CW+VFNSLN MPLRSLEEP YLL VF AHPLACL+LLR+IARNAG IAR+HI D+ +LRFID+ECYSWSV  A+LTPMINAGMVFSDRHYGG+ YP GGVGRI+++LV+GI   PG  V Y  RV +V+F E GRA GV+L++GSEI AKAVISN+TRWDTF  GGLV++++VP +E  FR+RY KSPSFCS H+AVR  DL+VSM  +DGMDCHHI+LD W E+ETA D +GT+FVSIPTVLD SLAPEGMHIFH+FTPS +DEW+GLS ++Y  KK +ML+ + +RLER LFPGL  AIEF+EVGSPKTHRRFLGR+DGSYGPVA K+L GL+SMPFNRT++DGLYCVGDSTFPGQGLNA AFSGF+C HRV ADLG +  LP+PLD  LT+LLSK RL +
Sbjct:   35 RSRKTISATLDEVDVVVVGSGIGALTAAADLTSKGATVGVLERYLIPGGSAGQFIRKGFRFDVGASMIFGLGSEGTTNLLTRALQTVQKNIESIPDPVQVNYHLPGNLDVQVFRDYDRFLDSLIDLFPH-----RHFYDSCWSVFNSLNVMPLRSLEEPRYLLNVFAAHPLACLNLLRFIARNAGGIAREHIRDETVLRFIDIECYSWSVACANLTPMINAGMVFSDRHYGGVRYPKGGVGRIAEQLVEGIREHPGSWVCYGKRVKQVMFDENGRASGVRLSNGSEIRAKAVISNSTRWDTFDDGGLVEQKYVPESELLFRKRYKKSPSFCSAHLAVRAEDLKVSMLAEDGMDCHHILLDSWEEMETATDAQGTIFVSIPTVLDDSLAPEGMHIFHIFTPSEMDEWNGLSRKEYEEKKDVMLKTMVDRLERRLFPGLSSAIEFSEVGSPKTHRRFLGRVDGSYGPVASKRLNGLMSMPFNRTDVDGLYCVGDSTFPGQGLNAVAFSGFSCAHRVGADLGFVESLPQPLDRTLTNLLSKTRLNI 572          
The following BLAST results are available for this feature:
BLAST of Ggra4934.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D2AH110.000e+084.31Prolycopene isomerase n=2 Tax=Gracilariaceae TaxID... [more]
A0A2D2AH240.000e+079.83Prolycopene isomerase n=2 Tax=Gracilariopsis TaxID... [more]
A0A2D2AH473.360e-31173.82Prolycopene isomerase n=3 Tax=Gigartinaceae TaxID=... [more]
A0A2D2AH411.360e-31073.02Prolycopene isomerase n=1 Tax=Dumontia simplex Tax... [more]
A0A2D2AH175.260e-30876.33Prolycopene isomerase n=1 Tax=Ahnfeltiopsis flabel... [more]
A0A2D2AH128.550e-30574.42Prolycopene isomerase n=1 Tax=Gloiopeltis furcata ... [more]
prolycopene isomerase, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFB483.170e-28674.20prolycopene isomerase, chloroplastic-like n=1 Tax=... [more]
A0A2D2AH102.730e-28066.78Prolycopene isomerase n=1 Tax=Heterosiphonia pulch... [more]
A0A2D2AH151.570e-27568.04Prolycopene isomerase n=1 Tax=Betaphycus gelatinus... [more]
A0A2D2AH181.530e-27369.43Prolycopene isomerase n=1 Tax=Melanothamnus japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 50..143
e-value: 3.0E-17
score: 65.1
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 263..378
e-value: 1.8E-12
score: 49.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 48..553
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 62..448
e-value: 2.9E-14
score: 53.2
IPR014101Prolycopene isomeraseTIGRFAMTIGR02730TIGR02730coord: 51..554
e-value: 2.3E-239
score: 793.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..40
NoneNo IPR availablePANTHERPTHR46313:SF3PROLYCOPENE ISOMERASE, CHLOROPLASTICcoord: 29..560
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..578
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..196
IPR045892Prolycopene isomerase-likePANTHERPTHR46313FAMILY NOT NAMEDcoord: 29..560

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:223482..225218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4934.t1Ggra4934.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 223482..225218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4934.t1 ID=Ggra4934.t1|Name=Ggra4934.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=579bp
MSSPAFVSPLPVRPSLNQKASPSKRPKYQLRATAQPVRSPTLPKADTKHV
DVVVIGSGIGALTAAADLASKGASVCVLEKYLIPGGSSGYFARDGYMFDA
GASMIFGFGERGTTNLLTRALETVGRRLETIPDPVQVRYHLPGINIRVHR
EYEVFLDELIKRFPSEEKGIRKFYGECWNVFNSLNAMPLRSLEEPNYLLR
VFFAHPLACLSLLRYIARNAGEIARKHIADKDLLRFIDMECYSWSVVPAD
LTPMINAGMVFSDRHYGGINYPVGGVGRISQELVQGIEGKPGCSVQYKSR
VAKVLFSEGRACGVKLADGSEINAKAVISNATRWDTFGGGGLVDEEHVPA
AEYRFRERYLKSPSFCSMHIAVREADLEVSMHEKDGMDCHHIMLDDWNEL
ETARDGKGTLFVSIPTVLDKSLAPEGMHIFHVFTPSWLDEWDGLSNEDYN
VKKQMMLEVVTERLERTLFPGLKGAIEFAEVGSPKTHRRFLGRIDGSYGP
VAKKKLRGLLSMPFNRTELDGLYCVGDSTFPGQGLNATAFSGFACGHRVA
ADLGLIGKLPEPLDSFLTDLLSKQRLKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR002937Amino_oxidase
IPR014101CrtISO
IPR045892CrtISO-like