Ggra4933.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4933.t1
Unique NameGgra4933.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length515
Homology
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A2V3IRN7 (FACT complex subunit SSRP1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRN7_9FLOR)

HSP 1 Score: 833 bits (2151), Expect = 1.060e-301
Identity = 417/466 (89.48%), Postives = 444/466 (95.28%), Query Frame = 0
Query:    1 MATDDGPVLSFNSISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGRQQMRMMDVD 466
            M TDDG VLSF SISTAGQA ASGTLRLS+AGFAWRAK STR ++V++TDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFR+SD+++IGEFVS   G KTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNV+TKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKM+EELVEMRF+IP E++A+ VYEQVK RADTSAFAGESLCSF HMGVAVPRGRYDVDMYANYIKLRG+AVDFKILYSSI RLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKT VDLPISA+DL  KYK KLNETESGYTWRVFSKVLKNLSATPLHVPK+FKS+E+GSGVRTALGANEGFLFFLETCCFFVNKPPTY RYDDID+VEFRRMDLERRFDLFIA++TGTNQT LFTNIERS+FEPIFSFLHE+KKVPVEGAEQLKRTGGRQQ+RM+D D
Sbjct:    1 MPTDDGAVLSFGSISTAGQAFASGTLRLSKAGFAWRAKESTRTITVSATDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRSSDFTTIGEFVSQQHG-KTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVKTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMEEELVEMRFYIPEEEDAKKVYEQVKTRADTSAFAGESLCSFLHMGVAVPRGRYDVDMYANYIKLRGRAVDFKILYSSITRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTSVDLPISAEDLAKKYKSKLNETESGYTWRVFSKVLKNLSATPLHVPKTFKSSEDGSGVRTALGANEGFLFFLETCCFFVNKPPTYIRYDDIDYVEFRRMDLERRFDLFIALTTGTNQTLLFTNIERSDFEPIFSFLHESKKVPVEGAEQLKRTGGRQQVRMVDGD 465          
BLAST of Ggra4933.t1 vs. uniprot
Match: R7QG91 (FACT complex subunit SSRP1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG91_CHOCR)

HSP 1 Score: 684 bits (1765), Expect = 2.630e-243
Identity = 330/433 (76.21%), Postives = 384/433 (88.68%), Query Frame = 0
Query:   32 GFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGRQQMRMMD 464
            GFAW+AK S RN++VA+ DL K+ WLRGGR  QL +SL+ GST+R EG +++D+  +  F+  H G K L  V QA RGWSWGELDV+ GAA+NLIFRTGGG + + KA +FE++FE+PLGKVANVQLPGN KELALDFHVDDTA KMDEELVEMRF+IP E+EA+D +E++KARADTSAFAGES+CSF HMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSI RLFLLPKPDN+IVSFVMSLDPPIRQGNTMYPHLVFQFD+EEKTR+DLP+SA +LQ KYKGKL+ETE GYTWRVFSK+LKNLS+TPLHVPK+FKS+   SGVRTALGANEGFLFFLE+CC FVNKPPTY RYDDIDFVEFRRMDLERRFDLF++++TG++ T+LFTNIERSEFE +F FL+E++KVPVE AEQLKRTGGRQ++ + D
Sbjct:    5 GFAWKAKESNRNVTVAALDLSKLRWLRGGRAMQLAISLKAGSTIRFEGLKSNDFQDLQSFMRQHFG-KELLIVKQAVRGWSWGELDVSKGAAANLIFRTGGGESAKNKAREFEDSFEMPLGKVANVQLPGNAKELALDFHVDDTAAKMDEELVEMRFYIPDEEEAKDSFERIKARADTSAFAGESMCSFLHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSITRLFLLPKPDNVIVSFVMSLDPPIRQGNTMYPHLVFQFDSEEKTRIDLPLSADELQAKYKGKLSETEEGYTWRVFSKILKNLSSTPLHVPKTFKSSTGASGVRTALGANEGFLFFLESCCVFVNKPPTYIRYDDIDFVEFRRMDLERRFDLFMSLTTGSSATYLFTNIERSEFEHVFQFLYESRKVPVENAEQLKRTGGRQRVTLAD 436          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A1X6P6F0 (FACT complex subunit SSRP1 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6F0_PORUM)

HSP 1 Score: 471 bits (1211), Expect = 4.490e-158
Identity = 245/460 (53.26%), Postives = 327/460 (71.09%), Query Frame = 0
Query:   10 SFNSISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGG---NNVRTKALQ--------------FEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQLK 452
            +F +I  AGQ+  SG L+L   G +W+AK +TR L++A +++  + WLRG RG Q+++++RGG+++R +GF+ SD+S +  F    LG  +L+R  QA RGWSWGE+ +   A+ +L FRTG G   N+ R  + Q               E+AFE+ LG V+NVQ+P   +ELALDFHVDDTA + DE LVE+RF +  E  A  +YE +K+RADTSAFAGES+C+F  M V VPRGRYDVD++ N++KL GK+VDFKILY+SI RLFLLPKPD   V+FV+SLDPPIRQGNTMYPHLVFQFD E+     L +S ++L  KY  KL   E G TWRVFSKV+++LS T LH+PK+F ++     VRTALGANEGFLFFL+T  FFVNKPPTY R+DD++ ++FRR+DL+RRFD+ + ++     T LFTNI+RSEF+ I  FL + K VP+E  E L+
Sbjct:   32 TFGNIYLAGQSSGSGVLKLGANGLSWKAKDTTRTLALARSEVSSLSWLRGCRGWQVRVAIRGGASVRFDGFKDSDFSGLATFFPATLG-LSLSRAKQAVRGWSWGEVAINR-ASGSLEFRTGNGAEGNDGRVMSSQAAARDANAAAANARMEDAFEVALGSVSNVQMPSK-QELALDFHVDDTAARQDECLVEVRFHVSDETRAASLYESIKSRADTSAFAGESICTFLDMPVIVPRGRYDVDLFPNHVKLHGKSVDFKILYNSISRLFLLPKPDGQHVAFVVSLDPPIRQGNTMYPHLVFQFDLEDAIDARLQLSTEELTTKYHSKLAAVEKGETWRVFSKVVRHLSGTSLHMPKNFLTSRGHRAVRTALGANEGFLFFLDTSFFFVNKPPTYIRFDDVEEIDFRRLDLDRRFDMHVTVTGSGTGTFLFTNIDRSEFDAILRFL-DGKGVPIENVEALR 487          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A5J4YMW4 (FACT complex subunit SSRP1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMW4_PORPP)

HSP 1 Score: 422 bits (1084), Expect = 1.280e-139
Identity = 232/468 (49.57%), Postives = 305/468 (65.17%), Query Frame = 0
Query:    9 LSFNSISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHL-------GGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEG--AEQLKRTGGRQQMRM-MDVD 466
            L F  +  AG  +  GTL+++ +G AWR +   R L+V   DL ++ WLRGGR  QL+   RG  + R EGF+ SD++SI  FV  H         G+ LTR+ QA RGWSWG   V+ GA   L F             + EE FEI L  VA V L G   EL L+FH DDTAG MDE + E+R  I  E EAE + E ++ +ADTSAFAGE L SF+ + + VPRG+Y+V+++ NY KL G++VD+KILYSS+ +LFLLPKPD I VSFV+SLDPPIRQGNTMYPHLVF F  +E+  V   ISA++L  KY+ KL  TE G  WRVFSK +++LS  PLH+P+SF S      VRTALGANEG++FFLE+C FF+NKPPT  R+DD++ V+F+RMD  R FDL + +++   Q  LF+NI+R+EF+ I  FL ++ KVP+    A   K + GR    + M+VD
Sbjct:    5 LQFAGVLLAGLGVGEGTLKIASSGLAWRGREGARVLTVNKADLQQLVWLRGGRAQQLRCVCRGQISHRFEGFKESDFASIEAFVQKHALIGAAPKDGQHLTRLKQASRGWSWGTASVSGGA---LYFHND----------KLEEVFEISLSSVAQVNLSG-ANELGLEFHTDDTAGAMDECMTELRLAIAEEAEAESLAEAIRDKADTSAFAGERLASFSEISLLVPRGKYEVELFPNYFKLHGRSVDYKILYSSVTKLFLLPKPDEIHVSFVVSLDPPIRQGNTMYPHLVFNFKADEEVSVQFNISAEELAQKYE-KLKPTEEGELWRVFSKSVRHLSGKPLHIPRSFTSVHEQRAVRTALGANEGYIFFLESCMFFLNKPPTLIRFDDVELVQFKRMDNSRSFDLSVTLTSA--QVFLFSNIDRAEFDNIHEFL-KSHKVPMASIAAHVKKLSSGRGSAAVDMEVD 454          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A7S1TCE2 (FACT complex subunit SSRP1 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCE2_9RHOD)

HSP 1 Score: 402 bits (1033), Expect = 3.820e-132
Identity = 215/451 (47.67%), Postives = 297/451 (65.85%), Query Frame = 0
Query:    8 VLSFNSISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHL------GGKTLTRV--NQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQ 450
            V  F  +  AGQ+  +GTL L   G  W+++  TR + V   ++  +EW RG +G+ L+  LRGG++++ +G +  D+S++ +FV++        GG+ +  V   Q   GWSWG    T GA   ++ +   GN          E FEIPLG V+ V +P    E+AL+FHVDDT G  DE LVEMR  IP  +EA  +Y+ +KA+ADTSAFAGES+ SF  + V +PRGRYDVD+Y +++KL GK+ D+KILY+SI RLFLLPKPD + V FVMSLDPPIRQGNTMYPHL+F F  E      L +S  DL+ KY  K+++ E G  W+VFSKV + L+  PLHVPK+F S      VRTALGAN+G +F LE+  FFV KPPTY R+DDI+ +EF+RMD+E+RFD+  A++T +  T LF+NI++ EF+ I  FL ++KK+P+ G  +
Sbjct:    3 VQKFGGVLLAGQSSGTGTLMLGNTGLNWKSREGTRAVDVVKEEIGSLEWFRGMQGYLLRCKLRGGASVKFDGLKEVDFSTVRDFVAESWKGTGGDGGRGVELVMGKQLTSGWSWGRAQ-TVGA--EMLMQEKEGNR---------EMFEIPLGDVSQVSMPSRN-EVALEFHVDDTMGPTDECLVEMRIAIPDIEEASKLYDGIKAKADTSAFAGESIASFDEVPVILPRGRYDVDLYPSHLKLHGKSADYKILYNSISRLFLLPKPDEVHVDFVMSLDPPIRQGNTMYPHLIFHFLNETAVETVLKLSESDLKTKYDDKIHKREEGELWKVFSKVTRTLTGKPLHVPKTFSSAHGQRAVRTALGANDGHIFLLESSFFFVVKPPTYIRFDDIEEIEFKRMDMEKRFDM--AVTTLSGNTFLFSNIDKVEFDNIHKFL-KSKKIPLSGTRE 437          
BLAST of Ggra4933.t1 vs. uniprot
Match: M2WRZ7 (FACT complex subunit SSRP1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRZ7_GALSU)

HSP 1 Score: 397 bits (1021), Expect = 2.220e-130
Identity = 211/455 (46.37%), Postives = 303/455 (66.59%), Query Frame = 0
Query:   13 SISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVP---VEGAEQLKRTGGRQQMRMMD 464
            S++  G +  +GTLR+   G +WRAK + R + +   +LL + W+RG RG QL   LRG +T R EGFR  D+  + E   + L    + R  Q  +GW+WG+ ++   A   LIF +  G           +AF++PL +V+ VQ+P +  E+AL+FHVDDTA K DE LVE+R ++  E  A D+Y+ +   A++S F GESL +F  M + VPRGRY+VD+Y N++KL GK+ D+KILY+++ R+FLLPKPD   ++FV+SLDPP+RQGNT+YPHLVFQF  +E+   +  ++  +L+++Y   L     G TW VFSK+L+ L+  PLH P SFKS    S VRTALGAN+G+LFFLE C FFVNKPPTY R++D++ +EF+RMDLERRFDL I +S+G   + LF+NI+R EF+ I++FL E K++P   ++ A + +RT   QQ   +D
Sbjct:   19 SLAGTGASSGTGTLRVHSGGISWRAKETARTVDIDKENLLSLRWIRGARGMQLVCVLRGDNTNRFEGFREQDFEVVNESCKEKLS-LEVKRAPQPIKGWNWGDAELRGRA---LIFHSAEG----------VDAFDVPLEEVSQVQMPSSS-EVALEFHVDDTAAKTDECLVELRLYVHNESHAADLYKGILKSAESS-FTGESLINFVDMPLLVPRGRYEVDLYPNHLKLHGKSFDYKILYTAVTRMFLLPKPDEAHITFVVSLDPPVRQGNTLYPHLVFQFQKDEEVDAEFALTENELKSRYPN-LVGVSGGATWEVFSKILRELTKKPLHSPISFKSHRGQSAVRTALGANDGYLFFLENCMFFVNKPPTYIRFEDVEMIEFKRMDLERRFDLQITLSSG--HSLLFSNIDRPEFDNIYTFLEE-KRLPMSTIKEAFKRQRTPAEQQDDNLD 453          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A7J7IDL8 (FACT complex subunit SSRP1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDL8_9RHOD)

HSP 1 Score: 363 bits (933), Expect = 2.020e-116
Identity = 198/440 (45.00%), Postives = 287/440 (65.23%), Query Frame = 0
Query:   12 NSISTAGQALASGTLRLSRAGFAW--RAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKT-LTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEE-KTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEG 447
            +SI    Q+L +G+LRLS+AG  W  R +G    +SVA  DL  + W RG RG QL+ + + GST+  EGFRA+D  +   ++ +     + + R  Q+  GW++G++ +       ++F TG            E AFE+P+  VA V   G   ELAL+FH+DDTA K DE LVEMRF  P E+EA  ++ ++ AR   ++F GESL  F  +   VPRGRYD+++Y  Y+ + GK+ D+KILY ++ R+FLLPKPD I ++ V+SLDPPIRQGNT YPHLV Q   EE +  ++L ++ ++L+ +Y  KL     G  W+V +KVL+ L   PLH PK+F +++    +RTALGAN+G+L+ LE C FFVNKPPTY RY+D+DFVEF+R++++RRFDL + M +G++   LFTN+ERSEF  ++ FL E+K+V + G
Sbjct:    8 DSIYVTDQSLGAGSLRLSKAGLLWTPRTEG-LYTISVAREDLASLRWFRGARGDQLRCTRQDGSTVNFEGFRAADRVTFEAYIKETWAWTSGIPRGEQSVLGWNFGQIRILG---ETILFMTGS-----------ETAFELPISDVAQVVRSGRN-ELALEFHLDDTASKTDECLVEMRFQAPSEEEAVALHAELSARVGPASFTGESLAFFEELAFIVPRGRYDLELYPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRREEDEIEIELNMAEEELKRRYGDKLPSKLRGEPWQVVTKVLRALVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMDRRFDLQVVMLSGSSL--LFTNLERSEFSALYHFL-ESKQVRMVG 428          
BLAST of Ggra4933.t1 vs. uniprot
Match: M1VLQ6 (FACT complex subunit SSRP1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLQ6_CYAM1)

HSP 1 Score: 360 bits (923), Expect = 1.070e-114
Identity = 194/432 (44.91%), Postives = 283/432 (65.51%), Query Frame = 0
Query:   19 QALASGTLRLSRAGFAWRAKGS-TRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGG-KTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEE-KTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEG 447
            Q+L  G+LRLS+AG  W  +      +SVA  DL  + W RG RG QL+ + + GST+  EGFR +D +++ E+V +     K + R  Q   GW++G++ +      +++F +G            E AFE+P+  ++ V   G   ELAL+FH+DDTAGK DE LVEMRF  P E++A  ++ ++ AR  +++F GESL  F  +   VPRGRYD++++  Y+ + GK+ D+KILY ++ R+FLLPKPD I ++ V+SLDPPIRQGNT YPHLV Q   ++ +  V L +  ++LQ +Y  KL    SG  W+V +KVL+ L   PLH PK+F +++    +RTALGAN+G+L+ LE C FFVNKPPTY RY+D+DFVEF+R++++RRFDL + M  G+  T LFTN+ERSEF  ++ FL E+K+V + G
Sbjct:   15 QSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEG---ESVLFVSGS-----------ETAFELPISDISQVVRSGRN-ELALEFHLDDTAGKTDECLVEMRFQAPTEEDAIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMDRRFDLQVVMLNGS--TLLFTNLERSEFSTLYQFL-ESKQVRMVG 428          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A7S0ZKL3 (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKL3_9RHOD)

HSP 1 Score: 290 bits (742), Expect = 7.050e-91
Identity = 150/256 (58.59%), Postives = 192/256 (75.00%), Query Frame = 0
Query:  203 VKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDLE-RRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQLKRTGGR 457
            V+A+ADTSAFAGES+ SF  + + VPRGRY+VD++ N++KL GK+VD+KILY+S+ RLFLLPKPD + V+FV+SLDPP+RQGNT YPHLVFQF  +E   + L +S +D   KY  KL   ESG  WRVFSKV+++LS  PLHVPK+F S      VRTALGANEG+LFFLE+   FVNKPPTY R+D+ID VEF+RM++  R FD  + M+ G+  T LF+NIER+EFEPI+ FL E  K+P+E    + RT  R
Sbjct:    2 VRAKADTSAFAGESIASFKDLPLFVPRGRYEVDLFPNHLKLHGKSVDYKILYTSVTRLFLLPKPDELHVAFVISLDPPVRQGNTHYPHLVFQFLNDETIDLQLKMSEKDRVEKY-DKLKTEESGELWRVFSKVMRSLSKKPLHVPKTFLSHHEQRAVRTALGANEGYLFFLESSLMFVNKPPTYVRFDEIDLVEFKRMEVNPRSFDFSVLMTNGS--TILFSNIERTEFEPIYGFL-EKHKIPMEPVPSVFRTKSR 253          
BLAST of Ggra4933.t1 vs. uniprot
Match: A0A0C9RIY2 (FACT complex subunit SSRP1 n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RIY2_9SPER)

HSP 1 Score: 263 bits (673), Expect = 5.780e-77
Identity = 152/433 (35.10%), Postives = 239/433 (55.20%), Query Frame = 0
Query:   24 GTLRLSRAGFAWRAKGSTRNLSVASTDLLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKTLTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIPLGKVANVQLPGNGKELALDFHVDDTAGKMDEE-LVEMRFFIP----------VEKEAEDVYEQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDFKILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEKTRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSFKSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRMDL-------ERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLH 438
            G LR+   G  W+ +G  + + V  TD+  + W R  RG+QL + L  G  ++  GFR  D S++  ++ + +G  T    N +  G +WGE+++     S ++                ++AFE+ L  V+  QL G   ++AL+FHVDDT G  +++ L+E+ F IP              A+   +++ A AD      E + SF  + +  PRGRY VD++ ++++L+G+A DFKI YSSI+RLFLLPK +      V+SLDPPIR+G T YPH+V QF TEE     L ++ + L  KYK KL     G +  VF+ +L+ LS + +  P  F+S ++G  VR++L A +G L+ LE   FF+ KPPT   +D+ID++EF R             FDL + + +   Q H F NI+R+E+  +F+F++
Sbjct:   21 GQLRIYAGGIVWKKQGGGKVVEVGKTDISSLSWTRVPRGYQLGVKLNAGLNVKFTGFREQDVSNLTNYMKNTMG-ITPEEKNLSLSGRNWGEVNIDGNMLSFIV--------------GMQQAFEVSLADVSQTQLQGRN-DVALEFHVDDTTGANEKDSLIELSFHIPNTNTSFTGDEARPPAQIFRDKIMAMADVGTSGDEPIASFEDVAILTPRGRYIVDLHISFMRLQGQANDFKIQYSSILRLFLLPKSNQPHTFVVISLDPPIRKGQTFYPHIVLQFATEEVAECTLSMTEEQLNTKYKDKLEPAYKGLSHEVFTLILRGLSGSKVTRPGKFRSCQDGYAVRSSLKAEDGLLYPLEKGFFFLPKPPTLILHDEIDYLEFERHGAGGTSSISSHYFDLIVRLKS--EQEHQFRNIQRNEYHNLFNFIN 435          
The following BLAST results are available for this feature:
BLAST of Ggra4933.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRN71.060e-30189.48FACT complex subunit SSRP1 n=1 Tax=Gracilariopsis ... [more]
R7QG912.630e-24376.21FACT complex subunit SSRP1 n=1 Tax=Chondrus crispu... [more]
A0A1X6P6F04.490e-15853.26FACT complex subunit SSRP1 n=1 Tax=Porphyra umbili... [more]
A0A5J4YMW41.280e-13949.57FACT complex subunit SSRP1 n=1 Tax=Porphyridium pu... [more]
A0A7S1TCE23.820e-13247.67FACT complex subunit SSRP1 n=1 Tax=Compsopogon cae... [more]
M2WRZ72.220e-13046.37FACT complex subunit SSRP1 n=1 Tax=Galdieria sulph... [more]
A0A7J7IDL82.020e-11645.00FACT complex subunit SSRP1 n=1 Tax=Cyanidiococcus ... [more]
M1VLQ61.070e-11444.91FACT complex subunit SSRP1 n=1 Tax=Cyanidioschyzon... [more]
A0A7S0ZKL37.050e-9158.59FACT complex subunit SSRP1 (Fragment) n=1 Tax=Tims... [more]
A0A0C9RIY25.780e-7735.10FACT complex subunit SSRP1 n=1 Tax=Wollemia nobili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 249..265
score: 66.18
coord: 422..440
score: 30.92
coord: 364..382
score: 36.84
coord: 382..399
score: 50.69
coord: 337..350
score: 30.36
coord: 227..243
score: 44.85
coord: 272..288
score: 67.65
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 356..447
e-value: 1.0E-17
score: 74.9
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 358..441
e-value: 1.3E-18
score: 67.1
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 110..191
e-value: 1.3E-12
score: 47.5
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 6..96
e-value: 2.5E-15
score: 58.6
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 347..453
e-value: 3.9E-26
score: 93.1
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 10..96
e-value: 1.4E-17
score: 63.9
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 99..199
e-value: 2.7E-19
score: 70.7
NoneNo IPR availableGENE3D2.30.29.150coord: 207..345
e-value: 3.3E-47
score: 161.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..514
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 11..512
NoneNo IPR availablePANTHERPTHR45849FACT COMPLEX SUBUNIT SSRP1coord: 11..512
NoneNo IPR availableCDDcd13230PH1_SSRP1-likecoord: 213..347
e-value: 3.72197E-62
score: 197.752
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 213..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:221411..222955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4933.t1Ggra4933.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 221411..222955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4933.t1 ID=Ggra4933.t1|Name=Ggra4933.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=515bp
MATDDGPVLSFNSISTAGQALASGTLRLSRAGFAWRAKGSTRNLSVASTD
LLKVEWLRGGRGHQLKLSLRGGSTLRLEGFRASDYSSIGEFVSDHLGGKT
LTRVNQACRGWSWGELDVTSGAASNLIFRTGGGNNVRTKALQFEEAFEIP
LGKVANVQLPGNGKELALDFHVDDTAGKMDEELVEMRFFIPVEKEAEDVY
EQVKARADTSAFAGESLCSFTHMGVAVPRGRYDVDMYANYIKLRGKAVDF
KILYSSIIRLFLLPKPDNIIVSFVMSLDPPIRQGNTMYPHLVFQFDTEEK
TRVDLPISAQDLQNKYKGKLNETESGYTWRVFSKVLKNLSATPLHVPKSF
KSTENGSGVRTALGANEGFLFFLETCCFFVNKPPTYFRYDDIDFVEFRRM
DLERRFDLFIAMSTGTNQTHLFTNIERSEFEPIFSFLHETKKVPVEGAEQ
LKRTGGRQQMRMMDVDDDSESDDDDFNPDAQDKEAASESSSDSEDDMPDE
DDEESRPPRKKKKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR013719DUF1747
IPR024954SSRP1_dom
IPR011993PH-like_dom_sf
IPR035417POB3_N
IPR038167SSRP1_sf