Ggra4929.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4929.t1
Unique NameGgra4929.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length405
Homology
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BLAST of Ggra4929.t1 vs. uniprot
Match: A0A2V3IRL5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL5_9FLOR)

HSP 1 Score: 550 bits (1416), Expect = 1.200e-193
Identity = 254/381 (66.67%), Postives = 317/381 (83.20%), Query Frame = 0 
Query:   16 LFQNASLPQKGHTQHLSSFNFDYVATVFPSYRTPRCVLLRCGPSRQPQTTIITSCDTLQATVVKTKTNLTARHCVSDFLLTHWDTLEGTYKHGVSYATHSILLATDARDLPFSMNSISLSLNEQRKLISTQWLSFRPSNQTRNLLRAWLNNAKNHPTNENLALTQIRGCAGRDIACHSRYGVIGAICHKPLRCGNGNSFFMGAARAVIILAFVQASILTAKQTRIPMEFIAILLLCVSLFSMKWTNAACTIARSLFCRCKTSLVGAAEVDGTLFTGDLRGWYEGRAYFLRDGVYEARVTGGMQPLFPPLFGLYMFFKRVLGDWFLFSGAMAVLVSAGVSRLLLFVSSWRKGDDHVKDEYVKSFDDIKALGLRKKGYGRRFL 396
            +F+NASLPQKGHTQH++S NFDY+ATVFPSYR PRCVL+RCGP  QPQTTI T+CDTLQ +V + K N+TA HCVSDFLL+HWDT+E +YKHGVSY ++ ++L TDAR+LPF  NSIS+S++E+R+ ISTQWLSF PSN TR LLRAWL+NAKNHP +EN+AL++IRGCAG+DI+CHSR GVIGA C K LRCG  NSF +  AR +++LAF+QA  L   +  IP E IA+LLL VSLF+MKWT+AACTIARS+ CRC++SL  A+ +DGTL+ G+LRGWYEGRAY LRDGV+E RVTGGMQP FP LF L+MFFKRV+GDW LF G+M V++    +RL+  V+SW+KG +  KD+YV+S DDI+ALG++K+GYGRRFL
Sbjct:    1 MFENASLPQKGHTQHITSPNFDYIATVFPSYRVPRCVLVRCGPPNQPQTTITTTCDTLQVSVQRAKRNITAHHCVSDFLLSHWDTMESSYKHGVSYVSNKVILGTDARNLPFLKNSISVSMDEKRRTISTQWLSFLPSNATRALLRAWLDNAKNHPADENMALSRIRGCAGKDISCHSRQGVIGATCEKALRCGKQNSFLLVVARTIVLLAFLQACALVVSEAAIPAEVIAVLLLVVSLFAMKWTSAACTIARSVLCRCRSSLSAASHMDGTLYEGELRGWYEGRAYLLRDGVHEVRVTGGMQPFFPGLFSLFMFFKRVIGDWVLFCGSMVVILVGFSARLVRIVASWKKGGEEEKDDYVRSIDDIRALGVQKRGYGRRFL 381
The following BLAST results are available for this feature:
BLAST of Ggra4929.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRL51.200e-19366.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..337
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..358
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 359..404
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..233
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availableTMHMMTMhelixcoord: 245..267
NoneNo IPR availableTMHMMTMhelixcoord: 338..360
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 213..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:207947..209161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4929.t1Ggra4929.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 207947..209161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4929.t1 ID=Ggra4929.t1|Name=Ggra4929.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=405bp
MLRPLVFLLVFTVLMLFQNASLPQKGHTQHLSSFNFDYVATVFPSYRTPR
CVLLRCGPSRQPQTTIITSCDTLQATVVKTKTNLTARHCVSDFLLTHWDT
LEGTYKHGVSYATHSILLATDARDLPFSMNSISLSLNEQRKLISTQWLSF
RPSNQTRNLLRAWLNNAKNHPTNENLALTQIRGCAGRDIACHSRYGVIGA
ICHKPLRCGNGNSFFMGAARAVIILAFVQASILTAKQTRIPMEFIAILLL
CVSLFSMKWTNAACTIARSLFCRCKTSLVGAAEVDGTLFTGDLRGWYEGR
AYFLRDGVYEARVTGGMQPLFPPLFGLYMFFKRVLGDWFLFSGAMAVLVS
AGVSRLLLFVSSWRKGDDHVKDEYVKSFDDIKALGLRKKGYGRRFLAPRL
STSP*
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