Ggra489.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra489.t1
Unique NameGgra489.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length179
Homology
BLAST of Ggra489.t1 vs. uniprot
Match: A0A2V3IQ51 (Proteasome-associated protein ECM29-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ51_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 3.000e-46
Identity = 86/172 (50.00%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    1 MVWETGSDADAVDARTKARKAQKLLCKAAIQCLQSSINGKAGIEKQVEHVQDLLCVFEELMQNDWDVRLVVLQGAERLSERFSTCELQFGDFVERGEVLTKRLVNLSKDGVHEPKYNMLRKSGLTILDHLSKVITDSTAMTDMIGEDTLTAIRKCRSEESEPGVRSVAIRLC 172
            MVWETGSDADAVDAR KARKAQK LCKAAIQCL++S++     ++Q+ HVQDLL +FE+++Q DWDVRL  L+  +R+++R ++ ++           + +R+VNLS+DG+HEPKY  L+K+GL+IL+ L+    D      ++G DT+  I  CR ++++PGVRSVA +LC
Sbjct:  419 MVWETGSDADAVDARNKARKAQKQLCKAAIQCLETSLSSAEHSDEQLLHVQDLLGIFEKVIQGDWDVRLSTLEALKRVTDRIASGDICKTAPAGAKGTMYERIVNLSRDGIHEPKYAALKKTGLSILEALTASADDFNFKHIIVG-DTMKHIVVCREDDADPGVRSVAKQLC 589          
BLAST of Ggra489.t1 vs. uniprot
Match: R7QLZ0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLZ0_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 4.200e-27
Identity = 63/176 (35.80%), Postives = 106/176 (60.23%), Query Frame = 0
Query:    2 VWETGSDADAVDARTKARKAQKLLCKAAIQCLQSSINGKAGIEKQVEHVQDLLCVFEELMQNDWDVRLVVLQGAERLSERFSTCELQFGDFVERGEV-LTKRLVNLSKDGVHEPKYNMLRKSGLTILDHLSKVITDSTAMTDMIGEDTLT-AIRKCRSEESEPGVRSVAIRLCTVF 175
            +WETGSDAD VDAR KARKA++ LC AAI C ++++      ++QVEH++ L+ +FE +    W+VRL VL+  +R+ +R     L FG     G   LT R+  L++ GV + KY  +R SG ++L  L + + D   + + + ++  + A++  R  +++P V+  A ++C +F
Sbjct: 1453 IWETGSDADIVDARNKARKARRGLCVAAIGCQEAALASGKRADRQVEHIESLMAMFESVETGHWEVRLGVLEAVQRVVKRLDEGVL-FGHSGHNGSTRLTVRIAKLAEFGVIDVKYAKIRVSGFSVLTVLGESLKDKGQVINFLSDEVQSQAMQAARKTDTDPAVQKSARKVCAIF 1627          
The following BLAST results are available for this feature:
BLAST of Ggra489.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQ513.000e-4650.00Proteasome-associated protein ECM29-like n=1 Tax=G... [more]
R7QLZ04.200e-2735.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000143_piloncontigtig00000143_pilon:7294..7830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra489.t1Ggra489.t1Gracilaria gracilis GNS1m malemRNAtig00000143_pilon 7294..7830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra489.t1 ID=Ggra489.t1|Name=Ggra489.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=179bp
MVWETGSDADAVDARTKARKAQKLLCKAAIQCLQSSINGKAGIEKQVEHV
QDLLCVFEELMQNDWDVRLVVLQGAERLSERFSTCELQFGDFVERGEVLT
KRLVNLSKDGVHEPKYNMLRKSGLTILDHLSKVITDSTAMTDMIGEDTLT
AIRKCRSEESEPGVRSVAIRLCTVFDFS*
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