Ggra4880.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4880.t1
Unique NameGgra4880.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length118
Homology
BLAST of Ggra4880.t1 vs. uniprot
Match: R7QH89 (Aldo_ket_red domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH89_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 1.980e-27
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 0
Query:    7 PFVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYLGIDENNMSASHEGLKKARLVV 117
            P  +    +K LL++  I+   LSNETTFGVCEFVR+ADEL M R   I N F LL+R FE  LAEAC+PSN NI  LP+++LAGG L+GKY G  ++N       L++AR V+
Sbjct:  172 PIRETLEGLKELLDEGKIKAYGLSNETTFGVCEFVRLADELGMPRPATIQNAFCLLNRSFEAELAEACSPSNFNIGLLPWSVLAGGVLTGKYNGKLDDNFEPMDNSLERARFVL 285          
BLAST of Ggra4880.t1 vs. uniprot
Match: A0A2V3J1V9 (Protein tas n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1V9_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 4.590e-27
Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 0
Query:    7 PFVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYLGIDENNMSASHEGLKKARLV 116
            P     LA+K LL+++ IR   LSNETTFG+C+FV +AD++ M R   I N F LL R FE  LAEACAPSN N+  LP++ILAGGALSGKYL   + + +     +K  RLV
Sbjct:  213 PIRDILLAIKELLDQRKIRAYGLSNETTFGLCQFVHMADQIGMPRPATIQNSFCLLDRRFESELAEACAPSNFNVGLLPWSILAGGALSGKYLDKVDEHRNPLDSSVKDCRLV 325          
BLAST of Ggra4880.t1 vs. uniprot
Match: A0A7S0ZKV2 (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKV2_9RHOD)

HSP 1 Score: 111 bits (278), Expect = 6.740e-27
Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    7 PFVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYLGIDENNMSASHEGLKKARLVV 117
            P  +  LA+K LL++  I+   LSNETT+GVCEFV+I DELN+ R   I N ++LLHR FE  LAEACAP + NI  LP+++LAGGALSGKY+ ++ NN     E LK +R V+
Sbjct:  192 PIRETVLAIKELLDEGKIKAWGLSNETTYGVCEFVKICDELNVQRPASIQNSYSLLHRSFETELAEACAPHHYNIGLLPWSVLAGGALSGKYV-LNNNNK----EALKNSRNVL 300          
BLAST of Ggra4880.t1 vs. uniprot
Match: A0A5J4YK59 (Protein tas n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YK59_PORPP)

HSP 1 Score: 108 bits (270), Expect = 8.370e-26
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    7 PFVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKY 95
            P  +   A+++LLE+  I+   LSNETTFGVCE VR ADE+ M R + I N F+LLHR FE  LAEACAPSN NI  LP+++LAGGALSGKY
Sbjct:  183 PLRETLDALRTLLEQGKIKHYGLSNETTFGVCEVVRAADEMGMPRPVSIQNSFSLLHRSFETELAEACAPSNYNIGLLPWSVLAGGALSGKY 274          
BLAST of Ggra4880.t1 vs. uniprot
Match: A0A7S1XIR3 (Hypothetical protein n=2 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIR3_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 3.460e-24
Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   14 AVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYL---GID 99
            A+K L+++  IR   LSNETTFGVCE VR ADEL   R   I N ++LLHR FE  LAEACAPS+ NI  LP++IL GGALSGKYL   G+D
Sbjct:  102 ALKELIDEGKIRAWGLSNETTFGVCEAVRAADELGAPRPASIQNSYSLLHRSFETELAEACAPSHYNIGLLPWSILCGGALSGKYLPDSGVD 193          
BLAST of Ggra4880.t1 vs. uniprot
Match: C1MQY9 (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQY9_MICPC)

HSP 1 Score: 102 bits (255), Expect = 1.670e-23
Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 0
Query:   26 LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYL 96
            LSNETTFGVCEFVR+AD+L + R   I N F LLHR FE  LAEACAPSN N+  LP+  LAGGALSGKYL
Sbjct:  238 LSNETTFGVCEFVRVADKLGVQRPATIQNSFCLLHRSFETELAEACAPSNFNVGLLPWTPLAGGALSGKYL 308          
BLAST of Ggra4880.t1 vs. uniprot
Match: K8EBB4 (Aldo/keto reductase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EBB4_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 2.410e-23
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    8 FVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYL 96
            F +  LA+K LL+   I+   LSNET++GVCEFVR+AD+L + R + I N F LLHR +E  LAE CAPS+ NI+ LP+  LAGGALSGKYL
Sbjct:  187 FEETVLALKELLDAGKIKSYGLSNETSYGVCEFVRVADKLGVPRPVSIQNSFCLLHRSYETELAETCAPSHHNISLLPWTPLAGGALSGKYL 278          
BLAST of Ggra4880.t1 vs. uniprot
Match: A0A7S0WCL0 (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WCL0_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 1.040e-22
Identity = 48/71 (67.61%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   26 LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYL 96
            LSNETTFGVCEFVR+ADEL + R + I N F LLHR FE  LAEACA  N NI  LP+  L GGAL+GKYL
Sbjct:   66 LSNETTFGVCEFVRVADELGVPRPVSIQNSFCLLHRSFETELAEACAKRNYNILLLPWTPLGGGALTGKYL 136          
BLAST of Ggra4880.t1 vs. uniprot
Match: C1DY22 (Aldo_ket_red domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DY22_MICCC)

HSP 1 Score: 99.8 bits (247), Expect = 1.670e-22
Identity = 54/93 (58.06%), Postives = 63/93 (67.74%), Query Frame = 0
Query:    7 PFVKRFLAVKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYL 96
            P  +   A+  L+    IR   LSNETT+GVCEFVR ADEL + R + I N F LLHR FE  LAEACAPS+ +I  LP+  LAGGALSGKYL
Sbjct:  174 PIKETVAALGELIAAGKIRHYGLSNETTYGVCEFVRAADELGVPRPVSIQNSFCLLHRTFETELAEACAPSHYDIGLLPWTPLAGGALSGKYL 266          
BLAST of Ggra4880.t1 vs. uniprot
Match: R7QJA6 (Aldo_ket_red domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJA6_CHOCR)

HSP 1 Score: 99.0 bits (245), Expect = 4.760e-22
Identity = 57/106 (53.77%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   15 VKSLLEKKTIR---LSNETTFGVCEFVRIADELNMARSIPIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYLGIDENNMSASHEGLKKARLVV 117
            +K LL++  IR   LSN+TTFGV E VR ADEL M R   I N F LL+R FE  LAEAC+P + N+  LPY+IL GGALSGKYLG    N S     L  +R V+
Sbjct:  230 IKQLLDQGKIRAYGLSNDTTFGVAEIVRAADELGMPRPASIQNGFCLLNRSFEYELAEACSPMHYNVGLLPYSILGGGALSGKYLGKLGANGSDLDPELSDSRFVM 335          
The following BLAST results are available for this feature:
BLAST of Ggra4880.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QH891.980e-2751.75Aldo_ket_red domain-containing protein n=1 Tax=Cho... [more]
A0A2V3J1V94.590e-2752.21Protein tas n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S0ZKV26.740e-2753.51Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A5J4YK598.370e-2660.87Protein tas n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A7S1XIR33.460e-2460.87Hypothetical protein n=2 Tax=Erythrolobus australi... [more]
C1MQY91.670e-2370.42Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
K8EBB42.410e-2357.61Aldo/keto reductase n=1 Tax=Bathycoccus prasinos T... [more]
A0A7S0WCL01.040e-2267.61Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
C1DY221.670e-2258.06Aldo_ket_red domain-containing protein n=1 Tax=Mic... [more]
R7QJA64.760e-2253.77Aldo_ket_red domain-containing protein n=1 Tax=Cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036812NADP-dependent oxidoreductase domain superfamilyGENE3D3.20.20.100coord: 6..116
e-value: 1.4E-8
score: 36.1
IPR036812NADP-dependent oxidoreductase domain superfamilySUPERFAMILY51430NAD(P)-linked oxidoreductasecoord: 26..97
NoneNo IPR availablePANTHERPTHR43364:SF12NADP-DEPENDENT OXIDOREDUCTASE DOMAINcoord: 24..103
NoneNo IPR availablePANTHERPTHR43364NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATEDcoord: 24..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:482797..483150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4880.t1Ggra4880.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 482797..483150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4880.t1 ID=Ggra4880.t1|Name=Ggra4880.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=118bp
MNVRLYPFVKRFLAVKSLLEKKTIRLSNETTFGVCEFVRIADELNMARSI
PIPNEFTLLHREFEGHLAEACAPSNLNIASLPYAILAGGALSGKYLGIDE
NNMSASHEGLKKARLVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036812NADP_OxRdtase_dom_sf