Ggra4860.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A2V3J6P7 (Nuclear nucleic acid-binding protein C1D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P7_9FLOR) HSP 1 Score: 244 bits (623), Expect = 9.750e-76 Identity = 130/170 (76.47%), Postives = 145/170 (85.29%), Query Frame = 0
Query: 1 MERSHQQAELQYTKFSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKVEAGESTEHKQQPKRDRRKHIANARKSAAMLAALVFPEEEDLLRALQGKPGRLENEGEGNMASRILYKTFNEN 170
MERSHQQA+L TKFS+A+EQLQRALRP+LSAID LRS+ NEEELD +SR RMHISLAYAVNSLFCMYLRTQGIDPATHP+AEEI RVQDAF+RMRKVEAGEST HKQ PKRDRRKHIAN++KSAA LAALVFPEE+DLLRALQGK R E E + I++ +N
Sbjct: 1 MERSHQQAQLALTKFSYAVEQLQRALRPVLSAIDGLRSSSNEEELDAISRTRMHISLAYAVNSLFCMYLRTQGIDPATHPIAEEIVRVQDAFMRMRKVEAGESTSHKQLPKRDRRKHIANSKKSAARLAALVFPEEDDLLRALQGKTRRPELEEAESTPQSIIHDDAKQN 170
BLAST of Ggra4860.t1 vs. uniprot
Match: uncharacterized protein LOC123543406 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6310 (uncharacterized protein LOC123543406 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6310) HSP 1 Score: 100 bits (250), Expect = 6.350e-22 Identity = 61/158 (38.61%), Postives = 95/158 (60.13%), Query Frame = 0
Query: 1 MERSHQQAELQYTKFSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKVEAGESTEHKQQPKRDRRKHIANARKSAAMLAALVFPEEEDLLRALQGKPGRLENEGEGNM 158
ME Q + F L+ L+ A R +LSA+D LR+ G E+++ P+ RAR+ +LAYA+++LFCMYLRTQG DP+THPV EEI RV+ A++R+ +V +G+ R R++ A + + + L+ L+ E L A+ G E+ G+ N+
Sbjct: 1 MEAEQAQVQAALDIFGEKLDALEAATRQVLSALDELRANGGEDDVPPLVRARVDATLAYALSALFCMYLRTQGQDPSTHPVREEIGRVRAAYMRIHEVASGDKG-------RPRKRAHAPLQSAESQLSKLLTDGERALHHAVNG--ATKESTGKSNV 149
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A7S1T4K4 (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4K4_9RHOD) HSP 1 Score: 68.2 bits (165), Expect = 9.740e-11 Identity = 32/84 (38.10%), Postives = 57/84 (67.86%), Query Frame = 0
Query: 15 FSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKV 98
F +A+ +++ L+P+L + + G + + + A +H++LAY +NSLF M+LRTQG+D + HPV EEI RV+ A+ ++++V
Sbjct: 12 FENAIRAIEQGLQPVLEEASVGSADGGDVDTR-LREAEVHVALAYTLNSLFYMFLRTQGVDASQHPVREEIDRVKIAYAKLQRV 94
BLAST of Ggra4860.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFED7CF (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFED7CF) HSP 1 Score: 67.4 bits (163), Expect = 6.100e-10 Identity = 32/82 (39.02%), Postives = 58/82 (70.73%), Query Frame = 0
Query: 15 FSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMR 96
F+ +L+Q++ ++P+L +++ +LDP SRA++++ AY VN+LF +YL+TQGI+P HP+ +EIAR+Q F +++
Sbjct: 18 FNRSLKQVESMVQPLLEQPLTTKTS----KLDPESRAKVNLCCAYTVNTLFYLYLKTQGINPDDHPIKQEIARIQLYFKKLK 95
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A6A5BJN0 (Nuclear nucleic acid-binding protein C1D n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BJN0_NAEFO) HSP 1 Score: 67.4 bits (163), Expect = 7.420e-10 Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 15 FSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMR 96
F+ +L+Q++ ++P+L +LDP SRA++++ AY VN+LF +YL+TQGI+P HP+ +EIAR+Q F +++
Sbjct: 17 FNRSLKQVESLVQPLLEQ----PLTSKTSKLDPESRAKVNLCCAYTVNTLFYLYLKTQGINPDDHPIKQEIARIQLYFKKLK 94
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A151ZD21 (Nuclear nucleic acid-binding protein C1D n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZD21_9MYCE) HSP 1 Score: 66.2 bits (160), Expect = 8.730e-10 Identity = 35/105 (33.33%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 7 QAELQYTKFSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKVEAGESTEHKQQPK 111
Q + + F L++L+ L P + + E+L P +++++++AYA+N+LF MYL+TQGI P HPV E+ R++ F+++R + + +STE +++PK
Sbjct: 9 QIQQDISNFESILDKLETQLEPFFR----IPLKEHLEKLSPNDSSKLNVTVAYALNALFFMYLQTQGISPHEHPVKSELERIKPYFLKLRNL-SNKSTEEEEKPK 108
BLAST of Ggra4860.t1 vs. uniprot
Match: nuclear nucleic acid-binding protein C1D-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0001869040 (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0001869040) HSP 1 Score: 64.7 bits (156), Expect = 4.120e-9 Identity = 29/85 (34.12%), Postives = 54/85 (63.53%), Query Frame = 0
Query: 15 FSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKVE 99
FS +L+ ++ +P L + + E+L+ + +A++H++ YA+NSLF +YL TQGIDP HP+ E+ R++ R++++E
Sbjct: 19 FSDSLKSVEEVFKPFLQM-----ALEDVEKLESLDQAKLHLTAVYAINSLFWIYLTTQGIDPKDHPIKNELDRIRSYMNRVKEIE 98
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A7S0IES0 (Nuclear nucleic acid-binding protein C1D n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IES0_MICPS) HSP 1 Score: 65.5 bits (158), Expect = 4.230e-9 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 0
Query: 11 QYTKFSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARV 88
Q KF A+++++ L P+LSA E L+P+ RAR+HI+LA AV++L+ MY++T G+DPA H ++ E+ RV
Sbjct: 47 QLEKFEAAVQEMEDGLTPLLSA----DRKEMEAALNPLERARVHIALANAVSTLYAMYIKTVGMDPADHGISRELERV 120
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A0J0XBD7 (Exosome complex protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XBD7_9TREE) HSP 1 Score: 65.9 bits (159), Expect = 5.960e-9 Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 0
Query: 15 FSHALEQLQRALRPMLSAIDLLRSAGNEEELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARVQDAFVRMRKVEAG 101
FS +L+ L+ AL P+L+ A + L + RA++ + +AY +N+L MYL+T+GIDP TH VA E+ RV+ + ++R EAG
Sbjct: 12 FSVSLDTLESALAPLLAR----PLAETRDALGTIERAKLDVLIAYTINNLVWMYLKTRGIDPDTHGVAPELERVKTYYAKVRDAEAG 94
BLAST of Ggra4860.t1 vs. uniprot
Match: A0A0L0DEP2 (Nuclear nucleic acid-binding protein C1D n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DEP2_THETB) HSP 1 Score: 63.5 bits (153), Expect = 1.730e-8 Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 0
Query: 16 SHALEQLQRALRPMLSAIDLLRSAGNEE---ELDPMSRARMHISLAYAVNSLFCMYLRTQGIDPATHPVAEEIARV 88
S AL+++ AL + + + L EE LD +A+++++LAY++NSLF +YL+TQG DP+ HPVA+E+ARV
Sbjct: 8 SRALDEVDAALAQVEATMQPLLEKPLEEVMENLDNADKAKLNVALAYSLNSLFHIYLKTQGQDPSAHPVADELARV 83 The following BLAST results are available for this feature:
BLAST of Ggra4860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4860.t1 ID=Ggra4860.t1|Name=Ggra4860.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=315bpback to top |