Ggra4844.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4844.t1
Unique NameGgra4844.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length584
Homology
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A2V3IXG2 (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 738 bits (1906), Expect = 2.380e-262
Identity = 391/573 (68.24%), Postives = 460/573 (80.28%), Query Frame = 0
Query:   21 MALLF-ARSASV-SRSGAVTLATFRGTFCRRLRPPVPVVHRPNRTR-LSIRPLSTRDHSPQVNLYTSP-LSVPYNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSAIPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLVDKAEHDILGDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASS------MPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            MA  F  R ASV SRS   +L     TF  R RP     H     R L I  +ST+  +P  + YT+P +++    F EDTIFALSSGAGVTAGVAVIR+SGPHA+ CL ++    +   +P PRYA+LR+LYHP+S ELLDEALVL FP P SFTGEDVVEL VHGSRAVISAVV+A+ADC  P  ++RPAERGEFTRRAFENG++DLTAVEGLADLIAAETAMQRKQAL   +GH+K+TL+ WR +IKTCLAHVEAVIDFGDDVDD+VFE IIPR++ LR +I+ HL DAHRGEIIRGGARVAIVG+PNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQ+DLNGLAV VSDTAGLRDSTNDPIE+EG+RRAR+AA+RAD+TVLVHDVT GD+  A++ LP+RLS+ D   +    +++ LVCVLNKVDLV+ ++        +VFKTSLL+NEG++ELVDHLES IR +CEG +T GS+E   + ++      MPIITRARHRHHMKNAV+ALDSF+ GR+G+ PSLYLPMDLAAEDLRIA KELGAITG+ID EEVLD+IF EFCIGK
Sbjct:    1 MAFFFLTRLASVPSRSSRSSLGALCKTFSVRWRPFSACAHNNKSVRKLEIHAVSTKHETPTTHEYTNPAVNLTQTVFHEDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISAPSTRQKLPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADCTDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDDQVFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVTEGDLETALQALPSRLSACDGTQDPDDRADQRLVCVLNKVDLVNTSDQSSKDKDIEVFKTSLLRNEGVSELVDHLESMIRVVCEGGETGGSSENTKNTNTKNTSELMPIITRARHRHHMKNAVAALDSFVQGRTGAIPSLYLPMDLAAEDLRIAGKELGAITGQIDSEEVLDVIFNEFCIGK 573          
BLAST of Ggra4844.t1 vs. uniprot
Match: R7QKJ8 (TrmE-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ8_CHOCR)

HSP 1 Score: 470 bits (1209), Expect = 1.590e-159
Identity = 240/382 (62.83%), Postives = 300/382 (78.53%), Query Frame = 0
Query:  205 VRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLV-DKAEHDILGDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISAS--SMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            VRPAERGEFTRRAFENG+MDLT+VEGLADLI+AETA+QRKQALRQ  G ++  L+ WRA+IK+CLAH EAVIDFGDDVDD+ FE I+PR+ DL  +++ HL+D HRGEI+RGGARVAIVG+PNAGKSTLLNALA+RPAAIVSP AGTTRDVVEV +DLNGLAV VSDTAGLR  T DPIE+EGM+RAR AAS AD+T+LVHD + G +  AI ++      +++D E+  ++  +++CV NK+DL+ D  E         +F TSL+ N+GL+EL  HLE+ ++   EGS   G   +  S +  S+P+ITRARHRHHM  AV AL  F++GR+G +PSLYLPMD+A E+LRIAAKE+G+ITG I  EEVLD++F EFCIGK
Sbjct:    8 VRPAERGEFTRRAFENGRMDLTSVEGLADLISAETALQRKQALRQLGGEMRDLLEGWRAEIKSCLAHAEAVIDFGDDVDDDAFEAIVPRVSDLLMKMKGHLNDGHRGEIVRGGARVAIVGQPNAGKSTLLNALAQRPAAIVSPQAGTTRDVVEVHLDLNGLAVVVSDTAGLRQDTADPIEIEGMKRARQAASNADITILVHDASQGGMETAIESISMDRRGSENDMETGTHA--NIICVANKIDLIPDSFESKTTVRDIPIFSTSLVNNDGLSELTTHLENLLKVRLEGSGGVGKDGERSSKAQGSIPVITRARHRHHMTLAVEALSVFMEGRTGDNPSLYLPMDIATEELRIAAKEIGSITGIIHVEEVLDVVFSEFCIGK 387          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A5J4YTG5 (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTG5_PORPP)

HSP 1 Score: 427 bits (1097), Expect = 9.080e-141
Identity = 260/520 (50.00%), Postives = 330/520 (63.46%), Query Frame = 0
Query:   94 QEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPS------AIPPPRYASLRRLYHPISA--------------ELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVV--RPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLVDKAEHDI-------LGDAY-KVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            ++DTIFALSSGA   AGVAVIRISGPHA   LR LL +Q  S      A+P  R ASLR+L+  IS+              E+LD+ALVL FP P+SFTGEDVVELHVHG  AV+SAV + +       L +  RPAE+GEFTRRAFEN +MDLT VEGLADLI+AET  QR+ ALRQ  G+L+     WRA I  C+A+VEAVIDFGDDVDD+  + + P +RDL   +  H+ D  RGEI+R G RVAIVG PNAGKS+LLNALAKRPAAIVS  AGTTRDV+EV +D+ G+AV +SDTAG+R+ T D IE  G+ RA+ A + AD+ + V DV   D GA++R      S T SD          +V V NK DL  + E  +       LG A       S     G+       E+ +R +   +++ G+   E  AS   +ITRARHR H++NA+ +L +F+      +    LP+D+A E+LR AA ELG ITG I  E+VLD++FQ+FCIGK
Sbjct:   11 EQDTIFALSSGASQKAGVAVIRISGPHADVVLRHLLSAQDVSDPDPELALPKARMASLRKLFGGISSTSVDAGAALVGNMKEILDQALVLRFPGPRSFTGEDVVELHVHGGLAVVSAVTNELMRLRMHPLAIPLRPAEKGEFTRRAFENDRMDLTEVEGLADLISAETTEQRRLALRQMGGNLRVLYDSWRAQIIKCMANVEAVIDFGDDVDDDALDAMAPLLRDLEAELSAHVQDNRRGEIVRSGVRVAIVGAPNAGKSSLLNALAKRPAAIVSSVAGTTRDVIEVHLDVAGVAVILSDTAGIREETEDAIEQIGIERAKQALADADLVLHVVDVRQTD-GASMRAF----SDTQSDSVG-------VVTVFNKTDLSSEEERQVAAATMQQLGRAKGSELWISCTTGAGMDAFQSAFETRVRELL-WNNSSGTGH-ECDASPTAVITRARHRVHVENAIHSLRTFIHEFLEQN---NLPLDIATEELRHAASELGQITGTIHTEDVLDIVFQDFCIGK 513          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A836CK05 (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 8.080e-137
Identity = 248/499 (49.70%), Postives = 317/499 (63.53%), Query Frame = 0
Query:   96 DTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSA-IPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDD---VDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLR--DSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLVDKAEHD-----ILGDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            DTIFALSSG    AGVAVIR+SGP A   L  L+ +    A +P  R A++RRLY P+  +LLDEALVL  P P+SFTGED  ELH HGSRAV+  V+ A+         +RPAERGEFT+RA+ NG+MDLT VEGLADLIAA+TA QR+QALRQ  G LK   + WR ++  CLAH EAVIDFGDD   VD+  +  I P++  L   ++ HL D  RGEI+R G RVAI G PNAGKS+LLN LA+RPAAIVSP AGTTRDVV++Q+D+ GL V +SDTAGLR  ++  D +E EG+RRAR+A   + +T+ V D +    GAA       L +TD   +        ++ V NK DL   A        ++     V++ S    EG+   + HLE  I    +    +  A         P+ITRARHRHH++  +SAL+  +D      PSL  PMDLAAE+LR A+ ELG ITG +D EE+LD+IF++FCIGK
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAPGRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIPG----LRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVDEGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSSNEAEGAAAL---KDLQATDEPADVG-----SVILVSNKADLGTSATQQEPMQAMVQAGQPVWQLSCKTGEGVEAFLRHLEDEIARRYQTQQGQEDA---------PLITRARHRHHVQACLSALEGSMD------PSL--PMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A4D9CTT5 (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 5.090e-133
Identity = 240/474 (50.63%), Postives = 312/474 (65.82%), Query Frame = 0
Query:  133 SPSAIPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAI-ADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDD---VDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHD---VTAGDIGAAIRTLPNRLSSTDSDPES------KIYSERHLVCVLNKVDLVDKAEHDIL----------GDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            S +  P PR ASLR+LY P+  E LD+A+VL  P P+SFTGED VELH HGSRAV+  V +A+ A     +  VR AE GEFT RAF NG+MDLT VEGLADLIAA+TA QRKQAL+Q  G L+QT + WR ++K CLAH EAVIDFGDD   VD+  ++ I PR+R L + ++ HL D  RGE+IR G RVAIVG PNAGKST+LN LA+RPAAIVSP AGTTRDVVEVQ+D+ GL V VSDTAG+R++  DP+E EG+RRAR+AA RA +TVLV D   V   +  A++  +   L   D+ PE        +  +   + VLNK D V+  EH +           G +   +  SL   EG+ E++  L++ +  +    D  G+ ++   A   P+ITRARHR H++  + AL + + G  G      L +D+AAE+LRIA+ ELG ITG +D EEVLD+IF++FCIGK
Sbjct:    8 SSAPFPAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGPFLK--DAPPEDLETVLRAVGGDAGALLVLNKRDTVE-GEHLLEQLRCAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVF---DKDGTDDERAEA---PVITRARHRVHVERCLEALTASM-GEQG------LGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A6H5K111 (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 7.140e-132
Identity = 269/641 (41.97%), Postives = 345/641 (53.82%), Query Frame = 0
Query:   69 PLSTRDHSPQVNLYTSPLSVPYNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSA-----------------------------------IPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIA--DCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDD----EVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIR-TLPNRLSSTDSDPESKIYSERH------------------------LVCVLNKVDLV---------------------------------------------DKAEHDILGDAYK---------------VFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            P + ++    +    SPL  P +   EDTIFAL++G    AGVAV+RISGP ++  L+ L  + + S+                                    P  R A +RRLY P + +LLDEALVL  P P+SFTGED VELH HGSRAVI+ V+DA+A    AS    VR AERGEFT+RA+ NG+MDLT VEGLADL+AA+TA QRKQAL+Q  G L+   + WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I  HL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQMD+ GL VT+SDTAGLR++T+D IE EGMRRAR A   A + + V D T  D   A+   L       +++ E+ + + +                         L+ V NK DL                                                AE D +G A +               V+K S    EGL   ++HLE+ +R     S  +G+A+ E      P+ITR RHR H++  + AL      R+   P +  P+DLAAE+LRIA+ ELG ITG +  EE+LD+IF++FCIGK
Sbjct:    5 PRTNKEDGDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAEAAVTAAQRDYAAETEGVFGGXXXXXXXXXLDDLIVVANKADLALTLLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGTEGDEEGTSGSGGRVWKVSCKTKEGLDGFMEHLEAEVR-----SRFQGAADDE-----SPLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627          
BLAST of Ggra4844.t1 vs. uniprot
Match: D8LG51 (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 2.120e-128
Identity = 273/657 (41.55%), Postives = 352/657 (53.58%), Query Frame = 0
Query:   53 PVPVVHRPNRTRLSIRPLSTRDHSPQVNLYTSPLSVPYNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSAI----------------------------------PPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIAD--CASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDD----EVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERH------------------------LVCVLNKVDLV--------DKAEH---------------------------------------DILGDAYK---------------VFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            P P + R   + +   P + ++    ++   SPL    +   EDTIFAL++G    AGVAV+RISGP ++  L+ L  + + S++                                  P  R A +RRLY P + +LLDEALVL  P P+SFTGED VELH HGSRAVI+ V+DA+A    AS    VR AERGEFT+RA+ NG+MDLT VEGLADLIAA+TA QRKQAL+Q  G L+   + WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I  HL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQMD+ GL VT+SDTAGL  +T+D IE EGMRRAR A   A + + V D T  D GA       R  + +++ E+   + +                         L+ V NK DL          +AEH                                       D +G A +               V+K S    EGL   ++HLE+ +R     S  +G+A+ E      P+ITR RHR H++  + AL      R+   P +  P+DLAAE+LRIA+ ELG ITG +  EE+LD+IF++FCIGK
Sbjct:  153 PRPALRRAVGSNMKTLPRTNKEDGDLISTTRSPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTD-GATALLGKLREEAKEAEAEAAATAAQRDDAAEMEGVFGSGSSGGGSAALDDLIVVANKADLALTLLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGTEGDEEGRSGGGGRVWKLSCKTKEGLDGFMEHLEAEVR-----SRFQGAADDE-----SPLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A8J5XZ82 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT)

HSP 1 Score: 390 bits (1001), Expect = 1.070e-125
Identity = 254/531 (47.83%), Postives = 326/531 (61.39%), Query Frame = 0
Query:   83 TSPLSVPYNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLL---RSQSPSAIPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDD---EVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTN-DPIEMEGMRRARDAASRADVTVLVHDVTAG--------------DIGAAIRTLPNRLSSTDSDPESKIYS----ERHLVCVLNKVDLV--DKAEHDILGDAYKV-FKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSF--LDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            + PLS P      DTIFA+SSGAGV AGVAVIRISG  A   L+ ++   R     A   PR A+L +L  P S E LD ALVL FP+P+SFTGEDV ELHVHG RAV++AV+ A+      +L    AERGEFTRRAF NG+MDLT VEGL+DL+AA T  QR+QAL Q  G  +     WRA I  CLAH EAVIDFG+D DD   +V   + PR+ +L  ++   L DA RGE++R G RV IVG PNAGKS+LLN LA+RPAAIV+P AGTTRDV+E+++ L G  + + DTAGLR     D IE+EGMRRAR   + A + ++V DV+AG              + GA      +  +  D D  +   +    +  L+ VLNKVD +  ++A   + G A    F  S    EG+  L+D LE+ +R++ EG    G  E  I       +TRARHR H++ AV AL+ F  LDG         L +DLAAE+LRIAA E+G +TG I  EE+LD+IF++FCIGK
Sbjct:   57 SEPLSGPE---ARDTIFAVSSGAGVRAGVAVIRISGAGARIALQTMIARGRLDPSLAWLAPRMATLAKLLAPGSDERLDSALVLWFPAPRSFTGEDVAELHVHGGRAVVAAVLAALGALPGHRL----AERGEFTRRAFGNGRMDLTEVEGLSDLLAANTDAQRRQALAQMGGAARARFDGWRAQILDCLAHTEAVIDFGEDADDLGSDVLRVVSPRVAELAAQMTRALADARRGELLRDGPRVVIVGAPNAGKSSLLNRLAQRPAAIVTPIAGTTRDVLELELQLGGFPLRLCDTAGLRPRDEADEIEVEGMRRARALLADAPMRLVVADVSAGVPPSREELAALLRGEEGADAAGEASGAALGDGDEGANAAALDLDDSSLLVVLNKVDALPANRAPLSVHGIAPSCQFCISCETGEGMDALLDALEARVRALLEGE---GGGETAI-------VTRARHREHLEQAVGALERFARLDG---------LMVDLAAEELRIAASEVGKVTGTIRVEEMLDIIFRDFCIGK 561          
BLAST of Ggra4844.t1 vs. uniprot
Match: L8H4K9 (tRNA modification GTPase TrmE, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4K9_ACACA)

HSP 1 Score: 384 bits (987), Expect = 4.450e-124
Identity = 232/500 (46.40%), Postives = 306/500 (61.20%), Query Frame = 0
Query:   90 YNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSAIPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDD--VDDEVFEQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDVTAGDIGAAIRTL-PNRLSSTDSDPESKIYSERHLVCVLNKVDLVDKAEHDIL---GDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            Y     ++IFAL +     +GVAV+RISG  A A +R+L R+Q    +PPPR ASLR+LYH    ELLDE LVL FP P+SFTGED+ ELH+HGS A I+AV++A+         +R AE GEFT+RAF+NG+MDLT  EGLADLI AET  QRKQALRQ  G L +    WR ++  C+AHVEAVIDFG+D  +D EV   + PRI+ L D I  HL D+HRGE +R GA +AIVG PNAGKS+LLN LA+R AAIVS   GTTRDV+EV +DL G  +T++DTAG+R S  D IE EG+  AR+  + +D+ + + D      G    +L P+ LS  D+            + VLNK DL+  A   +    G   +V   S    EGL +L   LES ++S  E            +A    ++TRARHR H++  +   +     R        + +D+AAE+LR    ELG ITG++D +E+LD+IF +FCIGK
Sbjct:   67 YGGQSGESIFALGTSPAGKSGVAVVRISGERAGAAVRQLTRAQE---LPPPRLASLRKLYH--RDELLDEGLVLWFPGPRSFTGEDMAELHIHGSHAAITAVLNALGKLPG----MRSAEPGEFTKRAFQNGKMDLTEAEGLADLIDAETEAQRKQALRQMGGALGRLCNEWREELIKCIAHVEAVIDFGEDEHIDHEVAAAVQPRIKRLHDMIALHLSDSHRGERMRSGASLAIVGPPNAGKSSLLNLLARRKAAIVSSIPGTTRDVIEVSLDLAGYPLTIADTAGIRHS-EDEIEKEGVALARERFASSDIKICLFD------GTTYPSLEPDLLSLVDTST----------LVVLNKKDLLTSAPASVRLADGTQRRVITISCKNYEGLEDLTKALESQVKSFFESG----------AAPDGAVVTRARHREHLERYLDMAEEASASREAR-----MSIDMAAEELRRGLAELGRITGRVDLDEILDVIFSDFCIGK 525          
BLAST of Ggra4844.t1 vs. uniprot
Match: A0A484EFB1 (TrmE-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFB1_BRELC)

HSP 1 Score: 383 bits (984), Expect = 4.460e-124
Identity = 242/522 (46.36%), Postives = 322/522 (61.69%), Query Frame = 0
Query:   75 HSPQVNLYTSPLSVPYNDFQEDTIFALSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSAIPPPRYASLRRLYHPISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCASPQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDDEVF---EQIIPRIRDLRDRIQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADVTVLVHDV-TAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLVDKAEHDILGDAY------KVFKTSLLQNEGLTELVDHLESTIRSICE---GSDTRGSAEKEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK 583
            H   ++L T         ++ DTI+ALSS  G  AGVAVIRISG  A+ CL++L +S +   +P PR+A+LR+LYHP +   LD+ALVL FP P SFTGEDVVELH HGS AVIS+V++A++         R AE GEFT RAF+N ++DL  VEGLADL++AET  QR QALRQ +G + +  + WR  +  CLA+VEA+IDFGDD DD  F   E  + R+R+L D I  HL D  RGEI+R G +VAIVG PNAGKS+LLN LA+RPAAIVS  AGTTRD+V+V +++ G  V VSDTAGLR+ T D IE EG+ RA   AS AD+ V++ D+  AG +      L  +  S         Y     + VLNK DLVDK   + + +        ++   S  + + +   VD+L S ++   E   G+ T G+           IITR RHR ++ + +S+LD FL      DP      +LAAEDLR A   +G I G+ID E++LD++F +FCIGK
Sbjct:   14 HFVSISLGTETRKNSIGVYELDTIYALSSAPG-KAGVAVIRISGEQANLCLQQLSKSLT---LPRPRFAALRKLYHPKTKTHLDDALVLRFPHPHSFTGEDVVELHTHGSAAVISSVLEALSIVPH----CRAAEAGEFTERAFDNDKIDLLQVEGLADLLSAETEAQRHQALRQLSGDIGEIYEGWRHTLVKCLAYVEAMIDFGDDEDDVTFAAYEAAVKRVRELADSICGHLADNRRGEILRNGFQVAIVGPPNAGKSSLLNRLARRPAAIVSSIAGTTRDIVQVPLNIAGYPVIVSDTAGLRE-TEDVIEKEGVLRAEQCASDADICVVMMDIQNAGTL------LTEKYQS---------YLRSGAMIVLNKSDLVDKIHIESVLETVDSKLLERLLVVSCTEGDNIEAFVDNLASIVKEKIEESGGNSTNGA-----------IITRERHRQNLVSCLSSLDQFL-----LDP---YQSELAAEDLRRAVAAIGRILGRIDVEDILDVLFADFCIGK 492          
The following BLAST results are available for this feature:
BLAST of Ggra4844.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXG22.380e-26268.24tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
R7QKJ81.590e-15962.83TrmE-type G domain-containing protein n=1 Tax=Chon... [more]
A0A5J4YTG59.080e-14150.00tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
A0A836CK058.080e-13749.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CTT55.090e-13350.63TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A6H5K1117.140e-13241.97TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG512.120e-12841.55TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A8J5XZ821.070e-12547.83Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
L8H4K94.450e-12446.40tRNA modification GTPase TrmE, putative n=1 Tax=Ac... [more]
A0A484EFB14.460e-12446.36TrmE-type G domain-containing protein n=1 Tax=Brem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004520tRNA modification GTPase MnmETIGRFAMTIGR00450TIGR00450coord: 109..583
e-value: 2.3E-78
score: 262.2
IPR004520tRNA modification GTPase MnmEHAMAPMF_00379GTPase_MnmEcoord: 96..583
score: 29.913763
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 318..506
e-value: 9.6E-103
score: 346.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 170..482
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 225..580
e-value: 5.6E-50
score: 170.8
IPR018948GTP-binding protein TrmE, N-terminalPFAMPF10396TrmE_Ncoord: 97..221
e-value: 2.1E-36
score: 124.7
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430tRNA modification GTPase MnmE domain 2coord: 223..583
e-value: 9.6E-103
score: 346.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 318..409
e-value: 2.0E-16
score: 58.2
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 319..446
e-value: 1.7E-21
score: 76.4
IPR027266GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1GENE3D3.30.1360.120Probable tRNA modification gtpase trme; domain 1coord: 91..222
e-value: 1.6E-42
score: 146.5
NoneNo IPR availablePANTHERPTHR42714TRNA MODIFICATION GTPASE GTPBP3coord: 95..583
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 95..583
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..583
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availableSUPERFAMILY116878TrmE connector domaincoord: 223..583
IPR031168TrmE-type guanine nucleotide-binding domainPROSITEPS51709G_TRMEcoord: 317..487
score: 57.69698
IPR031168TrmE-type guanine nucleotide-binding domainCDDcd04164trmEcoord: 315..486
e-value: 2.1577E-47
score: 161.123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:261861..263612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4844.t1Ggra4844.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 261861..263612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4844.t1 ID=Ggra4844.t1|Name=Ggra4844.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=584bp
MSERPRLALDFPLRRHRSTSMALLFARSASVSRSGAVTLATFRGTFCRRL
RPPVPVVHRPNRTRLSIRPLSTRDHSPQVNLYTSPLSVPYNDFQEDTIFA
LSSGAGVTAGVAVIRISGPHASACLRRLLRSQSPSAIPPPRYASLRRLYH
PISAELLDEALVLCFPSPKSFTGEDVVELHVHGSRAVISAVVDAIADCAS
PQLVVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQF
TGHLKQTLQVWRADIKTCLAHVEAVIDFGDDVDDEVFEQIIPRIRDLRDR
IQTHLHDAHRGEIIRGGARVAIVGEPNAGKSTLLNALAKRPAAIVSPHAG
TTRDVVEVQMDLNGLAVTVSDTAGLRDSTNDPIEMEGMRRARDAASRADV
TVLVHDVTAGDIGAAIRTLPNRLSSTDSDPESKIYSERHLVCVLNKVDLV
DKAEHDILGDAYKVFKTSLLQNEGLTELVDHLESTIRSICEGSDTRGSAE
KEISASSMPIITRARHRHHMKNAVSALDSFLDGRSGSDPSLYLPMDLAAE
DLRIAAKELGAITGKIDCEEVLDLIFQEFCIGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004520GTPase_MnmE
IPR027417P-loop_NTPase
IPR025867MnmE_helical
IPR018948GTP-bd_TrmE_N
IPR027368MnmE_dom2
IPR005225Small_GTP-bd_dom
IPR006073GTP-bd
IPR027266TrmE/GcvT_dom1
IPR031168G_TrmE